Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_K10
(753 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY279382-1|AAP42277.1| 348|Homo sapiens cancer-associated gene ... 193 5e-49
BC009037-1|AAH09037.1| 348|Homo sapiens ATP binding domain 3 pr... 190 4e-48
BC125269-1|AAI25270.1| 515|Homo sapiens hypothetical protein LO... 35 0.27
BC108659-1|AAI08660.1| 515|Homo sapiens hypothetical protein LO... 35 0.27
BC080540-1|AAH80540.1| 507|Homo sapiens LOC348180 protein protein. 35 0.27
BC063512-1|AAH63512.1| 589|Homo sapiens LOC348180 protein protein. 34 0.48
AY358654-1|AAQ89017.1| 772|Homo sapiens CDH19 protein. 30 7.8
AJ007607-1|CAC13126.1| 772|Homo sapiens cadherin-19 protein. 30 7.8
>AY279382-1|AAP42277.1| 348|Homo sapiens cancer-associated gene
protein protein.
Length = 348
Score = 193 bits (471), Expect = 5e-49
Identities = 102/206 (49%), Positives = 133/206 (64%), Gaps = 6/206 (2%)
Frame = +1
Query: 145 MPVPCKRGC-GNNAVLKRPKTGDAICKECFFWAFETEIHYTITKGKLFNKGDSVAVAASG 321
MP P C A L+RP +G A+C CF AFE E+ +T+ G+L G VAV ASG
Sbjct: 1 MPAPPCASCHAARAALRRPLSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASG 60
Query: 322 GKDSTVLAHTLKTLNERYNYGLNLMLLSIDEGITGYRDDSLETVKQNRDDYEMPLKILSY 501
GKDSTVLAH L+ L R G++L L+++DEGI GYRD +L V++ +E+PL +++Y
Sbjct: 61 GKDSTVLAHVLRALAPR--LGISLQLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAY 118
Query: 502 KDLY-GWTMDEI---VAQIGRKNN-CTFCGVFRRQALDRGAAMLNVKCIATGHNADDIAE 666
+DL+ GWTMD + A GR + CTFCGV RR+AL+ GA + I TGHNADD+AE
Sbjct: 119 EDLFGGWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAE 178
Query: 667 TVLMNVLRGDIARLKRCTAITTGSEG 744
TVLMN LRGD RL R + + EG
Sbjct: 179 TVLMNFLRGDAGRLARGGGLGSPGEG 204
>BC009037-1|AAH09037.1| 348|Homo sapiens ATP binding domain 3
protein.
Length = 348
Score = 190 bits (464), Expect = 4e-48
Identities = 101/206 (49%), Positives = 132/206 (64%), Gaps = 6/206 (2%)
Frame = +1
Query: 145 MPVPCKRGC-GNNAVLKRPKTGDAICKECFFWAFETEIHYTITKGKLFNKGDSVAVAASG 321
MP P C A L+RP +G A+C CF AFE E+ +T+ G+L G VAV ASG
Sbjct: 1 MPAPPCASCHAARAALRRPLSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASG 60
Query: 322 GKDSTVLAHTLKTLNERYNYGLNLMLLSIDEGITGYRDDSLETVKQNRDDYEMPLKILSY 501
GKDSTVLAH + L R G++L L+++DEGI GYRD +L V++ +E+PL +++Y
Sbjct: 61 GKDSTVLAHVRRALAPRL--GISLQLVAVDEGIGGYRDAALAAVRRQAVRWELPLTVVAY 118
Query: 502 KDLYG-WTMDEIV---AQIGRKNNC-TFCGVFRRQALDRGAAMLNVKCIATGHNADDIAE 666
+DL+G WTMD + A GR +C TFCGV RR+AL+ GA + I TGHNADD+AE
Sbjct: 119 EDLFGGWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAE 178
Query: 667 TVLMNVLRGDIARLKRCTAITTGSEG 744
TVLMN LRGD RL R + + EG
Sbjct: 179 TVLMNFLRGDAGRLARGGGLGSPGEG 204
>BC125269-1|AAI25270.1| 515|Homo sapiens hypothetical protein
LOC348180 protein.
Length = 515
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +1
Query: 199 KTGDAICKECFFWAFETEIHYTITKGKLFNKGDSVAVAASGG-KDSTVLAHTLKTLNERY 375
+ GDA C++CF + + + K +L G+ V +A SGG S+++ L+ L++
Sbjct: 41 RAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDS 100
Query: 376 NYGLNLM--LLSIDEG 417
L + ++ +DEG
Sbjct: 101 AKRLRFVAGVIFVDEG 116
>BC108659-1|AAI08660.1| 515|Homo sapiens hypothetical protein
LOC348180 protein.
Length = 515
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +1
Query: 199 KTGDAICKECFFWAFETEIHYTITKGKLFNKGDSVAVAASGG-KDSTVLAHTLKTLNERY 375
+ GDA C++CF + + + K +L G+ V +A SGG S+++ L+ L++
Sbjct: 41 RAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDS 100
Query: 376 NYGLNLM--LLSIDEG 417
L + ++ +DEG
Sbjct: 101 AKRLRFVAGVIFVDEG 116
>BC080540-1|AAH80540.1| 507|Homo sapiens LOC348180 protein protein.
Length = 507
Score = 35.1 bits (77), Expect = 0.27
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +1
Query: 199 KTGDAICKECFFWAFETEIHYTITKGKLFNKGDSVAVAASGG-KDSTVLAHTLKTLNERY 375
+ GDA C++CF + + + K +L G+ V +A SGG S+++ L+ L++
Sbjct: 33 RAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSSSMVWQVLEGLSQDS 92
Query: 376 NYGLNLM--LLSIDEG 417
L + ++ +DEG
Sbjct: 93 AKRLRFVAGVIFVDEG 108
>BC063512-1|AAH63512.1| 589|Homo sapiens LOC348180 protein protein.
Length = 589
Score = 34.3 bits (75), Expect = 0.48
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 199 KTGDAICKECFFWAFETEIHYTITKGKLFNKGDSVAVAASGGKDST 336
+ GDA C++CF + + + K +L G+ V +A SGG S+
Sbjct: 44 RAGDAFCRDCFKAFYVHKFRAMLGKNRLIFPGEKVLLAWSGGPSSS 89
>AY358654-1|AAQ89017.1| 772|Homo sapiens CDH19 protein.
Length = 772
Score = 30.3 bits (65), Expect = 7.8
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 244 ETEIHYTITKGKLFNKGDSVAVAASGGKDSTVLA-HTLK-TLNERYN 378
++ I Y+IT+ K+FN D+ + S D + A + L T E+YN
Sbjct: 401 KSPIRYSITRSKVFNINDNGTITTSNSLDREISAWYNLSITATEKYN 447
>AJ007607-1|CAC13126.1| 772|Homo sapiens cadherin-19 protein.
Length = 772
Score = 30.3 bits (65), Expect = 7.8
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 244 ETEIHYTITKGKLFNKGDSVAVAASGGKDSTVLA-HTLK-TLNERYN 378
++ I Y+IT+ K+FN D+ + S D + A + L T E+YN
Sbjct: 401 KSPIRYSITRSKVFNINDNGTITTSNSLDREISAWYNLSITATEKYN 447
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,131,191
Number of Sequences: 237096
Number of extensions: 2419797
Number of successful extensions: 8722
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8692
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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