Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_K06
         (795 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50109-8|CAA90435.1|  479|Caenorhabditis elegans Hypothetical pr...   402   e-112
Z67754-2|CAA91752.2|  677|Caenorhabditis elegans Hypothetical pr...    31   0.95 
Z81466-2|CAC42256.1|  954|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z81466-1|CAB03869.1|  982|Caenorhabditis elegans Hypothetical pr...    29   5.1  
AJ133374-1|CAB40208.1|  954|Caenorhabditis elegans lin-10 protei...    29   5.1  
U41531-7|AAA83161.2|  415|Caenorhabditis elegans Feminizing gene...    28   6.7  
U14946-1|AAA67723.1|  415|Caenorhabditis elegans ribonucleoprote...    28   6.7  
U37430-2|AAL08045.2|  802|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>Z50109-8|CAA90435.1|  479|Caenorhabditis elegans Hypothetical
           protein C09H10.3 protein.
          Length = 479

 Score =  402 bits (991), Expect = e-112
 Identities = 177/217 (81%), Positives = 198/217 (91%)
 Frame = +1

Query: 145 KDKYGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIVNEMKTSGLRGR 324
           K  +G L DSDR+FTNLYGRH++RLKGA+ARGDW+ TKEI+LKG+DWI+ E+KTSGLRGR
Sbjct: 40  KTSFGNLKDSDRIFTNLYGRHDYRLKGAMARGDWHKTKEIILKGSDWILGELKTSGLRGR 99

Query: 325 GGAGFPTGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRA 504
           GGAGFP+GMKW FMNKP DGRPKYLVVNADEGEPGTCKDREIMRHDPHKL+EGCLI G A
Sbjct: 100 GGAGFPSGMKWGFMNKPFDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLIEGCLIGGVA 159

Query: 505 MGAQAAYIYIRGEFYNEASNLQVAIAEAYQAGLIGKNSCGSGYDFDIFVHRGAGAYICGE 684
           MGA+AAYIYIRGEFYNEA  LQ AI EAY+AG +GK+  G+GY+FD+FVHRGAGAYICGE
Sbjct: 160 MGARAAYIYIRGEFYNEACILQEAINEAYKAGYLGKDCLGTGYNFDVFVHRGAGAYICGE 219

Query: 685 ETALIESIEGKQGKPRLKPPFPXDVGLFGCPTTVNNV 795
           ETALIES+EGKQGKPRLKPPFP D+GLFGCPTTV NV
Sbjct: 220 ETALIESLEGKQGKPRLKPPFPADIGLFGCPTTVTNV 256


>Z67754-2|CAA91752.2|  677|Caenorhabditis elegans Hypothetical
           protein C34E11.2 protein.
          Length = 677

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 350 IPVGKPAPPLPRRPDVFISLTIQSVPFSKIS 258
           IP+  P PPLPR P     L   S+P+++I+
Sbjct: 492 IPMSSPPPPLPRTPQPNNGLPNASLPYNQIN 522


>Z81466-2|CAC42256.1|  954|Caenorhabditis elegans Hypothetical
           protein C09H6.2b protein.
          Length = 954

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 442 REIMRHDPHKLVEGCLIAGRAMGAQAAYIYIRGEFYNEASNLQVAIA 582
           +E M H+P  L+EG L   R +G+       RG      +  Q A+A
Sbjct: 563 KETMVHEPAVLIEGVLFRARYLGSTQMLCESRGSKAARMAQAQEAVA 609


>Z81466-1|CAB03869.1|  982|Caenorhabditis elegans Hypothetical
           protein C09H6.2a protein.
          Length = 982

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 442 REIMRHDPHKLVEGCLIAGRAMGAQAAYIYIRGEFYNEASNLQVAIA 582
           +E M H+P  L+EG L   R +G+       RG      +  Q A+A
Sbjct: 591 KETMVHEPAVLIEGVLFRARYLGSTQMLCESRGSKAARMAQAQEAVA 637


>AJ133374-1|CAB40208.1|  954|Caenorhabditis elegans lin-10 protein
           protein.
          Length = 954

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 442 REIMRHDPHKLVEGCLIAGRAMGAQAAYIYIRGEFYNEASNLQVAIA 582
           +E M H+P  L+EG L   R +G+       RG      +  Q A+A
Sbjct: 563 KETMVHEPAVLIEGVLFRARYLGSTQMLCESRGSKAARMAQAQEAVA 609


>U41531-7|AAA83161.2|  415|Caenorhabditis elegans Feminizing gene on
           x protein 1 protein.
          Length = 415

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 55  DTKPHLGIIGPLAINVNNVPVRFQQTQAPSK-DKYGPLADSDRVF 186
           D     G  GP  ++V+N+P RF+     +  +K+G ++D + +F
Sbjct: 142 DPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIF 186


>U14946-1|AAA67723.1|  415|Caenorhabditis elegans ribonucleoprotein
           protein.
          Length = 415

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 55  DTKPHLGIIGPLAINVNNVPVRFQQTQAPSK-DKYGPLADSDRVF 186
           D     G  GP  ++V+N+P RF+     +  +K+G ++D + +F
Sbjct: 142 DPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIF 186


>U37430-2|AAL08045.2|  802|Caenorhabditis elegans Hypothetical
           protein K09F5.6 protein.
          Length = 802

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +1

Query: 292 NEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKD 441
           +E K SG+ G  G G    ++W    + + G+P  L+ N      G  K+
Sbjct: 751 SENKGSGIYGTSGIGSGNNVQWGGAQRAAPGQPGQLLWNPPGATNGHNKE 800


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,724,276
Number of Sequences: 27780
Number of extensions: 497695
Number of successful extensions: 1360
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1357
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)