Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_K02
         (765 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0469 - 23178589-23178755,23179529-23179697,23179836-231799...    83   2e-16
06_03_0717 + 23834965-23835051,23836760-23836859,23837685-238377...    51   9e-07
09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504...    46   4e-05
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879...    31   1.0  
02_03_0313 - 17590109-17590148,17590254-17590382,17590479-175906...    28   7.1  

>02_04_0469 -
           23178589-23178755,23179529-23179697,23179836-23179919,
           23180495-23180647,23180798-23180950,23182488-23182589
          Length = 275

 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 48/151 (31%), Positives = 79/151 (52%)
 Frame = +1

Query: 208 MGALFGKHKKVVSRVTEQDKAVXXXXXXXXXXXXXXXXIELNLEKDRKLAKKLLEEGKRD 387
           MG +F K  KV    T+ D+A+                +E  +E +++ A++L+++ K+D
Sbjct: 1   MGNIFVKKPKV----TDVDRAILTLKTQRRKLAQFQQQLEKVIEAEKEAARQLVQQKKKD 56

Query: 388 RAXXXXXXXXYQENLLHNTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDIL 567
           RA         QE LL   DT    +EQ   D+E A  +  V D LK GN ALK + + +
Sbjct: 57  RALIALKKKKAQEELLKQVDTWQMNVEQQLSDIELASKQKAVFDSLKAGNAALKSIQNEI 116

Query: 568 NIDEIEKIMEESREGIDKQREIDELISGQLT 660
           NID+++K+M+++ E    Q EI+  +  QL+
Sbjct: 117 NIDDVQKLMDDTAEAKAYQDEINAALGEQLS 147


>06_03_0717 +
           23834965-23835051,23836760-23836859,23837685-23837770,
           23837867-23837958,23838659-23838773,23838847-23839029
          Length = 220

 Score = 51.2 bits (117), Expect = 9e-07
 Identities = 37/151 (24%), Positives = 66/151 (43%), Gaps = 2/151 (1%)
 Frame = +1

Query: 211 GALFGKHK--KVVSRVTEQDKAVXXXXXXXXXXXXXXXXIELNLEKDRKLAKKLLEEGKR 384
           G +FGK K     + +   DK                    L +EK +   K    + KR
Sbjct: 6   GKVFGKSKAQSQATALASIDKLSETLEMLEKKENLLVKKANLEVEKAKTFTKA---KNKR 62

Query: 385 DRAXXXXXXXXYQENLLHNTDTQLEKLEQLTHDLEFAQIEIQVLDGLKTGNVALKKVHDI 564
                      Y++ +    + QL   +Q+   LE A+   + +D L+TG  A+K +H  
Sbjct: 63  AAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIM-LEGAKATTETVDALRTGASAMKAMHKA 121

Query: 565 LNIDEIEKIMEESREGIDKQREIDELISGQL 657
            NID+++K M+E  + ++  R+I +L+S  +
Sbjct: 122 TNIDDVDKTMDEINDNMENMRQIQDLLSAPI 152


>09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,
            5043954-5044058,5044726-5044791,5044882-5044999,
            5045018-5045103,5045900-5046424,5046534-5047115,
            5047203-5047385,5049326-5049392,5049685-5049791,
            5049977-5050076,5050228-5050313,5050394-5050485,
            5050591-5050705,5050792-5050983
          Length = 984

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 28/108 (25%), Positives = 54/108 (50%)
 Frame = +1

Query: 334  LEKDRKLAKKLLEEGKRDRAXXXXXXXXYQENLLHNTDTQLEKLEQLTHDLEFAQIEIQV 513
            LE+ ++ +K    + KR           Y++ +    + QL   +Q+   LE A+   + 
Sbjct: 810  LERAKEFSKA---KNKRAAIQSLKRKKLYEQQIEQLGNFQLRIHDQMIM-LEAAKATTET 865

Query: 514  LDGLKTGNVALKKVHDILNIDEIEKIMEESREGIDKQREIDELISGQL 657
            +D L+TG  A+K +    NID+++K M+E  E  +  ++I + +S  L
Sbjct: 866  VDALRTGAAAMKAMQKATNIDDVDKTMDEINEQTENMKQIQDALSAPL 913


>02_04_0481 +
           23284296-23284448,23284553-23284753,23284855-23287971,
           23288510-23289353,23289468-23290120,23290573-23290676,
           23290898-23291000
          Length = 1724

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
 Frame = +1

Query: 334 LEKDRKLAKKLLEEGKRDRAXXXXXXXXYQENLLHNTDTQLEKLEQLTHDLEFAQIEIQV 513
           L+++  L K +LEE K DR+         Q  ++  TD    + + L  +LE  + +  +
Sbjct: 669 LDQELTLCKIILEEDKADRSEMMRLSGELQ-RMVQETDALKNEKDSLQKELERVEEKSSL 727

Query: 514 LDGLKTGNVALKKVHDILNIDE-IEKIMEESREGIDK-QREIDE 639
           L   +  ++A+KK   ++   E ++++++E +  I+K +  +DE
Sbjct: 728 L--REKLSMAVKKGKGLVQEREGLKQVLDEKKSDIEKLKHALDE 769


>02_03_0313 -
           17590109-17590148,17590254-17590382,17590479-17590612,
           17590779-17590841,17590920-17591070,17593372-17593424,
           17593483-17593629,17593839-17594163,17594240-17594409,
           17595252-17595453,17596065-17596273,17597051-17597260,
           17597360-17597489,17599664-17600402,17600411-17600531
          Length = 940

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = +1

Query: 421 QENLLHNTDTQLEKLEQLTHDLEFAQIEI-QVLDGLKTGNVALKKVHDILNIDEIEKIME 597
           +E+LL   +   EKL+Q  H L   + E  Q +D L+T N   +++   LN  + EK+ E
Sbjct: 550 RESLLQEHEALKEKLDQEYHQLAERKREFQQEIDALETHN---ERIKGYLNSKKGEKLNE 606

Query: 598 ESREGIDKQREIDE 639
              +    Q ++ +
Sbjct: 607 LQEKHTQLQSDLQK 620


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,552,395
Number of Sequences: 37544
Number of extensions: 186078
Number of successful extensions: 390
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)