Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_J20
         (825 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008746-1|AAH08746.1|  538|Homo sapiens CWF19L1 protein protein.     204   2e-52
AK001860-1|BAA91947.1|  538|Homo sapiens protein ( Homo sapiens ...   203   7e-52

>BC008746-1|AAH08746.1|  538|Homo sapiens CWF19L1 protein protein.
          Length = 538

 Score =  204 bits (499), Expect = 2e-52
 Identities = 104/253 (41%), Positives = 160/253 (63%), Gaps = 3/253 (1%)
 Frame = +2

Query: 71  KTLICGDVNGNFNALFTRVESIVKKSGQFDLLLCVGTFFGD-DNSQLDAYKMGTRKVPVT 247
           + L CGDV G F+ LF RV++I KKSG FDLLLCVG FFG   +++ + YK G +KVP+ 
Sbjct: 7   RLLACGDVEGKFDILFNRVQAIQKKSGNFDLLLCVGNFFGSTQDAEWEEYKTGIKKVPIQ 66

Query: 248 TYVFGPSNPDHVHHYCE-EGSEIVPNVIYMGRRGLFNTSTDVKIAYLTGLSRRELGKDIP 424
           TYV G +N + V ++ + +G E+  N+ Y+GR+G+F  S+ ++I YL+G     L + +P
Sbjct: 67  TYVLGANNQETVKYFQDADGCELAENITYLGRKGIFTGSSGLQIVYLSGTE--SLNEPVP 124

Query: 425 MCTYEPSDCSAVRDACFRGQSEFRGVDVLITTLWPSGIQQDECQKVDVEQDRL-SDLLSW 601
             ++ P D S++R       S+F+GVD+L+T+ WP  +        +V+  +  S L+S 
Sbjct: 125 GYSFSPKDVSSLR-MMLCTTSQFKGVDILLTSPWPKCVGNFGNSSGEVDTKKCGSALVSS 183

Query: 602 LAIHIKPRYHFVPSKDKFFERQPYRNQSMHQDYRECATRFIALXPVGNNLKEKWIYACSL 781
           LA  +KPRYHF   +  ++ER PYRN  + Q+  + ATRFIAL  VGN  K+K++YA S+
Sbjct: 184 LATGLKPRYHFAALEKTYYERLPYRNHIILQENAQHATRFIALANVGNPEKKKYLYAFSI 243

Query: 782 QPISXMRMTDLLQ 820
            P+  M   +L++
Sbjct: 244 VPMKLMDAAELVK 256


>AK001860-1|BAA91947.1|  538|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10998 fis, clone PLACE1002465. ).
          Length = 538

 Score =  203 bits (495), Expect = 7e-52
 Identities = 103/253 (40%), Positives = 159/253 (62%), Gaps = 3/253 (1%)
 Frame = +2

Query: 71  KTLICGDVNGNFNALFTRVESIVKKSGQFDLLLCVGTFFGD-DNSQLDAYKMGTRKVPVT 247
           + L CGDV G F+ LF RV++I KKSG FDLLLCVG FFG   +++ + YK G +K P+ 
Sbjct: 7   RLLACGDVEGKFDILFNRVQAIQKKSGNFDLLLCVGNFFGSTQDAEWEEYKTGIKKAPIQ 66

Query: 248 TYVFGPSNPDHVHHYCE-EGSEIVPNVIYMGRRGLFNTSTDVKIAYLTGLSRRELGKDIP 424
           TYV G +N + V ++ + +G E+  N+ Y+GR+G+F  S+ ++I YL+G     L + +P
Sbjct: 67  TYVLGANNQETVKYFQDADGCELAENITYLGRKGIFTGSSGLQIVYLSGTE--SLNEPVP 124

Query: 425 MCTYEPSDCSAVRDACFRGQSEFRGVDVLITTLWPSGIQQDECQKVDVEQDRL-SDLLSW 601
             ++ P D S++R       S+F+GVD+L+T+ WP  +        +V+  +  S L+S 
Sbjct: 125 GYSFSPKDVSSLR-MMLCTTSQFKGVDILLTSPWPKCVGNFGNSSGEVDTKKCGSALVSS 183

Query: 602 LAIHIKPRYHFVPSKDKFFERQPYRNQSMHQDYRECATRFIALXPVGNNLKEKWIYACSL 781
           LA  +KPRYHF   +  ++ER PYRN  + Q+  + ATRFIAL  VGN  K+K++YA S+
Sbjct: 184 LATGLKPRYHFAALEKTYYERLPYRNHIILQENAQHATRFIALANVGNPEKKKYLYAFSI 243

Query: 782 QPISXMRMTDLLQ 820
            P+  M   +L++
Sbjct: 244 VPMKLMDAAELVK 256


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,965,603
Number of Sequences: 237096
Number of extensions: 2667404
Number of successful extensions: 11855
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11847
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)