Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_J18
(844 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribo... 57 1e-08
AC024200-15|AAF36011.1| 945|Caenorhabditis elegans Poly(adp-rib... 57 1e-08
Z81485-4|CAB03978.1| 343|Caenorhabditis elegans Hypothetical pr... 29 3.1
U40945-1|AAA81719.2| 656|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL110479-21|CAB54373.1| 462|Caenorhabditis elegans Hypothetical... 29 4.1
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 29 5.5
U21324-18|AAA62570.2| 419|Caenorhabditis elegans C-type lectin ... 29 5.5
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 28 7.2
U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily ass... 28 7.2
>Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical
protein K07C5.3 protein.
Length = 493
Score = 66.5 bits (155), Expect = 2e-11
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 22/192 (11%)
Frame = +1
Query: 331 MSDSTP--FYVDRAKGGRAACKLCKGNCPSGELRMAKLVPS-------PYGDNQSMKSWY 483
M+ S P F D AK A C+ CK G LRM K++P+ P MK ++
Sbjct: 1 MASSAPPRFCTDYAKRV-AKCQKCKMQLEKGVLRMGKIMPNFFVAAKDPSKPPPDMKQYF 59
Query: 484 HVHCFTDVLLKQRPNTKRVESINDIGNWDNISKEDQELILKKLNE-TEKLY----AEKHS 648
H +C ++L K RP TK ++ ++I +++++ EDQ+ I K ++E EK AE
Sbjct: 60 HTNCLFEMLFKARPTTKVIDETDEIEGFEDLNAEDQDEIKKLVDELAEKRSKDGPAEPKK 119
Query: 649 GKYTAKLIENKSLGSI-------KKNSVKSEPDTTDSGNIVXD-NKFSTFIELCKRIAKV 804
K E + G + +KN + N D N F F+++C + ++
Sbjct: 120 TPAKKKTEEKEEKGDVEATPSRKRKNEETLKSKRPTEFNEESDFNSFYKFVKVCSVLKEI 179
Query: 805 DAYTEKTAAVNS 840
+EK+A + S
Sbjct: 180 SVKSEKSAVITS 191
>AF499444-1|AAM27195.1| 945|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-1 protein.
Length = 945
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Frame = +1
Query: 322 IIAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFT 501
+I ++ P+ ++ AK GR+ CK CK N +LRM+ PS + D +M SW+H +CF
Sbjct: 1 MIHSNEPLPYAIEYAKSGRSNCKTCKKNIALDQLRMSMNRPSTFFDG-NMDSWFHYNCFW 59
Query: 502 DVLLKQRPNTKRVESINDIG--NWDNISKEDQEL 597
+++ R + + SI + W++ K QE+
Sbjct: 60 IKMIRGRDDI-NISSIRGVDWLRWEDQEKLRQEI 92
>AC024200-15|AAF36011.1| 945|Caenorhabditis elegans
Poly(adp-ribose) metabolism enzymeprotein 1 protein.
Length = 945
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Frame = +1
Query: 322 IIAMSDSTPFYVDRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFT 501
+I ++ P+ ++ AK GR+ CK CK N +LRM+ PS + D +M SW+H +CF
Sbjct: 1 MIHSNEPLPYAIEYAKSGRSNCKTCKKNIALDQLRMSMNRPSTFFDG-NMDSWFHYNCFW 59
Query: 502 DVLLKQRPNTKRVESINDIG--NWDNISKEDQEL 597
+++ R + + SI + W++ K QE+
Sbjct: 60 IKMIRGRDDI-NISSIRGVDWLRWEDQEKLRQEI 92
>Z81485-4|CAB03978.1| 343|Caenorhabditis elegans Hypothetical
protein C49F5.4 protein.
Length = 343
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 202 LILNSAS*KKCFKTCHNRSRIRCFEYSTYIFKCVIASLAFIIAMSDSTPFYV 357
LI+ + KKCF+ RCFE + YIFKC + + + P Y+
Sbjct: 35 LIVRTVPIKKCFRG------ERCFEKTPYIFKCTSCRFQKCLYVGMTLPSYL 80
>U40945-1|AAA81719.2| 656|Caenorhabditis elegans Hypothetical
protein F10D7.1 protein.
Length = 656
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 589 QELILKKLNETEKLYAEKHSGKYTAKLIENKSLGSIKKNSVKSEPDTTD 735
++L ++ NE E+ Y +Y LIE K S++ VKSE +TD
Sbjct: 309 RKLRIRHANEKEQTYVPPEFQRY---LIETKENRSVRSKRVKSEFQSTD 354
>AL110479-21|CAB54373.1| 462|Caenorhabditis elegans Hypothetical
protein Y105C5B.25 protein.
Length = 462
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +1
Query: 565 WDNISKEDQELILKKLNETEKLYAEKHSGKYTAKLIENKSLG--SIKKNSVK 714
++NI + +QELI KK NET K + SG T +I+++ +G SI + S K
Sbjct: 316 YENIEQLEQELIFKKYNETVK---KTMSG--TKPIIKSEKIGLMSIHQASAK 362
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 541 ESINDIGNWDNISKEDQELIL--KKLNETEKLYAEKHSGKYTAKLIENKSLGSIKKNSVK 714
+S+ D D + D+ LI+ +L+ KLY SG+Y+ + SL ++ ++
Sbjct: 90 DSLKDFN--DELLLCDENLIIYNARLHRLNKLYESYKSGQYSQMKARSSSLSELRAAFIR 147
Query: 715 SEPDTT 732
S+ D +
Sbjct: 148 SKSDVS 153
>U21324-18|AAA62570.2| 419|Caenorhabditis elegans C-type lectin
protein 5 protein.
Length = 419
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 373 GRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFTDVLLKQRPNTKRVESI- 549
G A K GNC S +P+ + DN + Y+ HCFT L +R + ++I
Sbjct: 129 GSLAGKWLNGNCESDPRAFVCELPATHADNCTYN--YNGHCFT--LHTERNTFVQAQAIC 184
Query: 550 -NDIGNWDNISKEDQELILKKL 612
+ GN +I ++ L +
Sbjct: 185 EQECGNLASIHSSNENRYLSSI 206
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/83 (20%), Positives = 39/83 (46%)
Frame = +1
Query: 502 DVLLKQRPNTKRVESINDIGNWDNISKEDQELILKKLNETEKLYAEKHSGKYTAKLIENK 681
++L K + K E ++ D +S E+Q+ + KK++ A+ H + K+ + +
Sbjct: 489 EMLEKLENSKKSEEEKEELAKKDQMSTEEQKDLYKKISSAVMKAAKIHKIEEADKVQDEQ 548
Query: 682 SLGSIKKNSVKSEPDTTDSGNIV 750
++ VK++ + +S V
Sbjct: 549 AMEKFNIAKVKADSEEAESEGTV 571
>U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform a protein.
Length = 395
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +1
Query: 565 WDNISKEDQELILKKLNETEKLYAEKHSGKYTAKLIENKSLGSIKKNSVKSE 720
+D +++E+QEL +KK NE KL + S + + ++ S+G + N V+ E
Sbjct: 10 YDYLAQEEQELTIKK-NERLKLLDD--SKNWWKVMNDSNSVGFVPSNYVRKE 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,094,318
Number of Sequences: 27780
Number of extensions: 347182
Number of successful extensions: 939
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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