Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_J18
         (844 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              27   0.16 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   1.5  

>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 27.5 bits (58), Expect = 0.16
 Identities = 18/102 (17%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
 Frame = +1

Query: 541 ESINDIGNWDNISKEDQELILKKLNETEKLYAEKHSGKYTAKL-IENKSLGSIKKNSVKS 717
           ESIN +   +++  E+  + LKK ++ +K   +K+  K    +    K +G +  ++  +
Sbjct: 21  ESINKLRKIESVCAEENGIDLKKADDVKKGIFDKNDEKLACYVDCMLKKVGFVNADTTFN 80

Query: 718 EPDTTDSGNIVXDNKFSTFIELCKRIAKVDAYTEKTAAVNSF 843
           E    +    +   + +  +  CK I + ++  + +  +  F
Sbjct: 81  EEKFRERTTKLDSEQVNRLVNNCKDITESNSCKKSSKLLQCF 122


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 23/105 (21%), Positives = 40/105 (38%)
 Frame = +1

Query: 358 DRAKGGRAACKLCKGNCPSGELRMAKLVPSPYGDNQSMKSWYHVHCFTDVLLKQRPNTKR 537
           D    G A   LC G    G +    +    +G     K    +H   D L +   + +R
Sbjct: 28  DSLHAGNAEKTLCSGQVCLGSVMQLPI----HGTEPRSKEEILLHA-KDFLEQYFSSIRR 82

Query: 538 VESINDIGNWDNISKEDQELILKKLNETEKLYAEKHSGKYTAKLI 672
           + S      W+++ KE       +L ETE ++  K + +   + I
Sbjct: 83  LNSEAHRIRWESVQKEVTVTGTYQLTETELVFGAKLAWRNATRCI 127


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,029
Number of Sequences: 438
Number of extensions: 4074
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)