Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_J14
(729 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1596 + 28125331-28125556,28125986-28126047,28126160-281261... 56 2e-08
04_04_0863 + 28847761-28848009,28848108-28848131,28849388-288494... 55 7e-08
03_02_1006 + 13150394-13150450,13150787-13150899,13152538-131527... 53 3e-07
07_03_1599 - 28022196-28022218,28022355-28022408,28022545-280226... 52 6e-07
03_02_0185 - 6239421-6239480,6239971-6240024,6240523-6240578,624... 43 2e-04
12_02_0090 + 13493311-13494180 40 0.002
09_04_0574 + 18645363-18645870,18645995-18646491,18646631-186466... 31 0.71
03_06_0167 - 32115770-32115886,32116388-32117102,32117178-321173... 31 1.2
12_02_0292 + 16979550-16980662,16983249-16983731 30 1.6
08_02_0104 + 12404890-12405129,12405244-12405333,12405953-124060... 29 2.9
03_02_0875 + 12038365-12039329,12039417-12039593,12039651-120398... 29 2.9
03_02_0874 + 12017069-12018051,12018137-12018316,12018421-120186... 29 2.9
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 29 2.9
06_01_0220 - 1673657-1675765 29 3.8
03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328 29 3.8
08_02_0663 + 19797646-19798117,19798168-19798190 29 5.0
07_03_1611 - 28136398-28136572,28137995-28138567,28138762-28139123 29 5.0
07_03_0814 + 21700274-21701923,21702282-21702434,21702563-217026... 28 6.6
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 28 6.6
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 28 6.6
01_06_0846 + 32408333-32408484,32408560-32408926,32409021-324093... 28 6.6
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 28 6.6
11_03_0096 + 9956702-9956818,9957056-9957265 28 8.7
02_05_0697 - 30999644-31000762 28 8.7
02_01_0302 - 2021221-2023305 28 8.7
>08_02_1596 +
28125331-28125556,28125986-28126047,28126160-28126199,
28126934-28127029,28127138-28127169,28127274-28127349,
28127430-28127483,28127916-28127941
Length = 203
Score = 56.4 bits (130), Expect = 2e-08
Identities = 39/120 (32%), Positives = 54/120 (45%)
Frame = +2
Query: 320 GSVTGRPAVIQGFGETQSAVAMISDQSCCNKILGVVRLQQTAEGPLVADGSIDGLSPGRH 499
G+ R V+ T+ AVA++ S ++ GVV L Q +GP + + GL+PG H
Sbjct: 38 GAAAARALVVAD--ATKKAVAVLKGTS---QVEGVVTLTQDDQGPTTVNVRVTGLTPGLH 92
Query: 500 GLHVYESGDLSQGCNSIXXXXXXXXXXXXXXXXXXXXXXXXXLGNITADANGRAAFRIVD 679
G H++E GD + GC I LGNI A+A G A IVD
Sbjct: 93 GFHLHEFGDTTNGC--ISTGPHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVD 150
>04_04_0863 +
28847761-28848009,28848108-28848131,28849388-28849460,
28849550-28849684,28850191-28850411,28851747-28851983
Length = 312
Score = 54.8 bits (126), Expect = 7e-08
Identities = 48/169 (28%), Positives = 71/169 (42%), Gaps = 3/169 (1%)
Frame = +2
Query: 227 KTHDGIKEVVFKDGAFVVETV--LPSANVLDVVGSVTGRPAVIQGFGETQSAVAMISDQS 400
+T +GIK + VV + LP +LD + TGR A + G G + +
Sbjct: 112 QTLEGIKNIEVDLNNQVVRVLGSLPVNTMLDTLHQ-TGRDARLIGQGNPNDFLVSAAVAE 170
Query: 401 CCNKIL-GVVRLQQTAEGPLVADGSIDGLSPGRHGLHVYESGDLSQGCNSIXXXXXXXXX 577
++ GVVRL Q + + + GLSPG+HG + E GDL++G S
Sbjct: 171 FKGPVIFGVVRLAQVNMELAIVEATFSGLSPGKHGWSINEFGDLTRGAES--------TG 222
Query: 578 XXXXXXXXXXXXXXXXLGNITADANGRAAFRIVDDVLKVWDVIGXSVGV 724
LG + A G A F + LKV D+IG S+ +
Sbjct: 223 KVYNPSDYRSNKPLGDLGTLEAGEKGEAQFSASKEKLKVVDLIGRSIAL 271
>03_02_1006 +
13150394-13150450,13150787-13150899,13152538-13152709,
13153791-13153878,13153971-13154072,13154197-13154292,
13154547-13154578,13154727-13154802,13155264-13155317,
13155431-13155453
Length = 270
Score = 52.8 bits (121), Expect = 3e-07
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 413 ILGVVRLQQTAEGPLVADGSIDGLSPGRHGLHVYESGDLSQGCNSIXXXXXXXXXXXXXX 592
+ G + Q +GP GS+ GL PG HG H++ GD + GC S
Sbjct: 132 VKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMS--TGPHYNPAGKEHG 189
Query: 593 XXXXXXXXXXXLGNITADANGRAAFRIVDDVLKVW---DVIGXSVGV 724
LGN+TA +G A +VD + + +IG +V V
Sbjct: 190 APEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVV 236
>07_03_1599 -
28022196-28022218,28022355-28022408,28022545-28022620,
28022727-28022758,28022921-28023016,28023105-28023206,
28023291-28023366
Length = 152
Score = 51.6 bits (118), Expect = 6e-07
Identities = 33/107 (30%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +2
Query: 413 ILGVVRLQQTAEGPLVADGSIDGLSPGRHGLHVYESGDLSQGCNSIXXXXXXXXXXXXXX 592
+ G + Q +GP GS+ GL PG HG HV+ GD + GC S
Sbjct: 14 VKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMS--TGPHFNPTGKEHG 71
Query: 593 XXXXXXXXXXXLGNITADANGRAAFRIVDDVLKV---WDVIGXSVGV 724
LGNITA A+G A + D + + +IG +V V
Sbjct: 72 APQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVV 118
>03_02_0185 -
6239421-6239480,6239971-6240024,6240523-6240578,
6241108-6241183,6241276-6241307,6241421-6241516,
6242498-6242599,6242728-6242833
Length = 193
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 377 VAMISDQSCCNKILGVVRL-QQTAEGPLVADGSIDGLSPGRHGLHVYESGDLSQGCNS 547
VA+I + + G + Q + G G + GL+PG HG H++ GD + GCNS
Sbjct: 11 VALIGGAGGNSAVAGALHFFQDPSTGYTEVRGRVTGLAPGLHGFHIHSFGDTTNGCNS 68
>12_02_0090 + 13493311-13494180
Length = 289
Score = 40.3 bits (90), Expect = 0.002
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Frame = -1
Query: 471 LPSATRGPSAVCCSLT--TPRILLQHDWSEIMATADCVSPKPWITAGLPVTEPTTSRTFA 298
+P+ TR PSAV + T P + I+ A +PKP TA P P S
Sbjct: 72 IPATTRRPSAVVATSTPTAPSQTTAPSLATILVPATTSAPKP-ATASSPTKVPALS---- 126
Query: 297 LGSTVSTTNAPSLKTTSLIPS*VFNVLIVFSRN-WSSTDESKFTRTSSLVVS 145
+ +S PS TTS + + + ++F R+ SS FT TSS V +
Sbjct: 127 VNPILSIIGVPSPTTTSSLATTTTSTAVLFPRSTLSSASTPSFTTTSSPVTA 178
>09_04_0574 +
18645363-18645870,18645995-18646491,18646631-18646696,
18646921-18646989,18647401-18647466
Length = 401
Score = 31.5 bits (68), Expect = 0.71
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 1/121 (0%)
Frame = -3
Query: 643 GCNVSEIAGVPPIRGITGPPVRSPRRIIMPPYGIAALT*IPGLVYVEPVPPGA*SVDAAV 464
G VS+ + P G+ PP S ++ Y A T + G V + V PG +
Sbjct: 3 GAPVSKDLSLQPA-GVRTPPQMSSPGLLR--YRSAPST-LLGEVCGDFVLPGGGGGGGQL 58
Query: 463 SHQGALGRLLQPDHAQDLIAARLVRDHGDGRLRFPKTLDHGWSPRHG-ADHVQNVRAWEH 287
Q R PDHA D + AR + HG + P+ H P A H Q + H
Sbjct: 59 QLQLQQQRPGSPDHAADTVLARFLAGHGGHDNKPPRPAAHFAPPEDSMASHQQQLMYQSH 118
Query: 286 R 284
+
Sbjct: 119 Q 119
>03_06_0167 -
32115770-32115886,32116388-32117102,32117178-32117383,
32118094-32118138,32119047-32119109,32119726-32119749,
32120673-32120772,32120814-32120907,32121036-32121074,
32121605-32121668
Length = 488
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 386 ISDQSCCNKILGVVRLQQTAEGPLVADGSIDGLSPGRHGLHVYESGDLSQGC 541
+ DQ K++ + + A + ++ GL P HG HV+ G + GC
Sbjct: 15 LQDQERAEKVM-LKAVDVLASSLITVKENVSGLKPVLHGFHVHALGGTTNGC 65
>12_02_0292 + 16979550-16980662,16983249-16983731
Length = 531
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 250 GGFQGRCVCRRDGAPKRERSGRGRLRDGETSRDPR 354
GG RC RRDG P G +R G+ PR
Sbjct: 388 GGVADRCTARRDGRPNNSGEADGEVR-GDVPAKPR 421
>08_02_0104 + 12404890-12405129,12405244-12405333,12405953-12406036,
12406888-12407132,12409032-12409095,12409270-12409968,
12410063-12410176,12410287-12410418,12410594-12410770,
12411085-12411138,12411230-12411292,12411396-12412307,
12412408-12412535,12413680-12413962
Length = 1094
Score = 29.5 bits (63), Expect = 2.9
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 682 IIDNPECSSAVCVGCNVSEIAGVPPIR 602
++++ ECSS C+ V VPP++
Sbjct: 937 LVEDEECSSTYCISFRVKNAEAVPPVK 963
>03_02_0875 +
12038365-12039329,12039417-12039593,12039651-12039893,
12040045-12040124,12040242-12040508,12040599-12040710,
12040757-12041071,12041357-12041366
Length = 722
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = -3
Query: 436 LQPDHAQDLIAARLVRDHGDG---RLRF-PKTLDH 344
L PDHA ++ L++DHGD RL F P+ L H
Sbjct: 17 LDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLH 51
>03_02_0874 +
12017069-12018051,12018137-12018316,12018421-12018600,
12018718-12018797,12018999-12019259,12019360-12019474,
12019631-12019855,12020840-12020849
Length = 677
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = -3
Query: 436 LQPDHAQDLIAARLVRDHGDG---RLRF-PKTLDH 344
L PDHA ++ L++DHGD RL F P+ L H
Sbjct: 17 LDPDHAAKIMGLLLIQDHGDKEMIRLAFGPEALLH 51
>01_06_0213 + 27580635-27581105,27581206-27581298,27581376-27581540,
27581640-27581862,27582329-27582429,27582666-27582713,
27583086-27583172,27583745-27583879,27583985-27584140,
27585336-27585545,27585641-27586351,27586429-27586974,
27587872-27588495,27588595-27588699,27590460-27590711,
27590939-27591766
Length = 1584
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 220 DIENSRWNQGGGFQGRCVCRRDGAPKRERSGRGRLRDGETSR 345
D+ + RW G G +GR R G+ R GRGR R G R
Sbjct: 1333 DLFDGRWATGSGRRGRGRGSRGGS----RGGRGRSRGGRVPR 1370
>06_01_0220 - 1673657-1675765
Length = 702
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 10/97 (10%)
Frame = +2
Query: 257 FKDGAFVVETVLPSANVLDVVGSVTGRPAVIQGFGETQSAVAMISDQSCCNKILGVVRLQ 436
FKDG +E + ++ ++V G + + S + D ++ ++ +Q
Sbjct: 464 FKDGVLGLEHLAAVDSLCEIVARGMGAAEPPRTYHINLSVFTSLPDMWAIGQMFPIIPIQ 523
Query: 437 QTAEGPLV----------ADGSIDGLSPGRHGLHVYE 517
+ E P V +DG +D GRH L ++E
Sbjct: 524 RLGERPAVDGVLSDLTCDSDGKVDHFIGGRHSLPLHE 560
>03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328
Length = 448
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 244 QGGGFQGRCVCRRDGAPKRERSGRGRLRDGETSRDPRF-WGNAIGRRHDLGPVV 402
+G G+ R RR G P+R RS R R G R PR + + + R +GP +
Sbjct: 23 RGAGWAPRRRDRRRGGPRRGRSTRASSRRGR--RRPRSGYQSRVSRAEQVGPEI 74
>08_02_0663 + 19797646-19798117,19798168-19798190
Length = 164
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 229 NSRWNQGGGFQGRCVCRRDGAPKRERSGRGRLRDGETS 342
+S + G F C R G + E GRGRL DG S
Sbjct: 120 HSDGDSDGSFAVLVPCYRHGRCRVEEPGRGRLADGNVS 157
>07_03_1611 - 28136398-28136572,28137995-28138567,28138762-28139123
Length = 369
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -1
Query: 447 SAVCCSLTTPRILLQHDWSEIMATADCVSPKPWITAGL-PVTEPTTSRTFALGSTVSTTN 271
SA LT P +LL + ++ S P A L + PTT+ T +T +TT
Sbjct: 8 SATARMLTVPALLLLLSSAALLVFLILPSLSPSPAAHLCACSPPTTTHTTTTVTTTTTTA 67
Query: 270 APSLKTTS 247
+P+ TTS
Sbjct: 68 SPAPVTTS 75
>07_03_0814 +
21700274-21701923,21702282-21702434,21702563-21702634,
21702923-21703033
Length = 661
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = -1
Query: 486 LSPSMLPSA--TRGPSAVCCSLTTPRILLQHDWSEIMA--TADCVSPKPWITAGLPVTEP 319
L P++LP R P A C + ++P ++D+ +++ + SP P T+ LPVTE
Sbjct: 7 LPPTLLPHRHRLRLPPAGCSTSSSPSAT-RYDFDPLLSYLSTTSSSPSPPPTSVLPVTES 65
Query: 318 TTSRTFA 298
+ ++A
Sbjct: 66 RLAASYA 72
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 238 WNQGGGFQGRCVCRRDGAPKRERSGRGRLRDGETSRDPRFWGNAIGR 378
W G G + + +RER R L + ++DP F N +GR
Sbjct: 5 WGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGR 51
>02_01_0003 +
13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 263 DGAFVVE-TVLPSANVLDVVGSVTGRPAVIQGFGETQSAVAMISD 394
DG VV VL ++ + G+P V+ GFGE +A+ + D
Sbjct: 19 DGGKVVRGVVLKRGDLGSLPSEDNGKPGVLLGFGEAAAALPAVDD 63
>01_06_0846 +
32408333-32408484,32408560-32408926,32409021-32409301,
32409877-32409931,32410137-32410331,32410417-32410569
Length = 400
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 614 ASDPGDHRAPRAVPPTDYNAPLWNCSPDLNPRTRIR 507
A+ P D RA RAVPP + + +PD+ R R
Sbjct: 243 ATPPPDTRATRAVPPDHFTYSQDHVNPDIRGRRFFR 278
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 28.3 bits (60), Expect = 6.6
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 199 VPREDY*DIENSRWNQGGGFQGRCVCRRD-GAPKRERSGRGRLRDGETSRDPRFWGNAIG 375
VPR D D+ SR +GG + R R D G E R RDG + R +
Sbjct: 520 VPR-DLADMA-SRGGRGGRKRNRWATRSDRGGSHSELDSRYGGRDGLSGSSGRLDSSRSS 577
Query: 376 RRHDLG 393
RRHD G
Sbjct: 578 RRHDYG 583
>11_03_0096 + 9956702-9956818,9957056-9957265
Length = 108
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 234 TMESRRWFSRTVRLSSRRCSQARTFWTWSA 323
T+ RR + V+ ++RR A ++WTW +
Sbjct: 17 TLGGRRQLAGQVQAAARRRGHAASYWTWGS 46
>02_05_0697 - 30999644-31000762
Length = 372
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -3
Query: 388 DHGDGR-LRFPK-TLDHGWSPRHGADHVQNVRAW 293
DHGDG P TL H +SP G H+ AW
Sbjct: 222 DHGDGEAFDGPLGTLAHAFSPTDGRFHLDAAEAW 255
>02_01_0302 - 2021221-2023305
Length = 694
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Frame = -3
Query: 667 ECSSAVCVGCNVSEIAGVPPIRGITGP--PVRSPRRIIMP---PYGIAALT*IPGLVYVE 503
+CS A C + + G P RG GP PV SP R P P + P
Sbjct: 374 DCSKAQCQAASYTPTPGGSPGRGGQGPPAPVSSPPRRRGPYPQPPSSSPTPSYPSPSSSY 433
Query: 502 PVPPGA 485
P PPG+
Sbjct: 434 PAPPGS 439
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,518,584
Number of Sequences: 37544
Number of extensions: 412791
Number of successful extensions: 1529
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1517
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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