Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_J14
(729 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide... 53 2e-07
X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc sup... 48 7e-06
L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide dism... 48 7e-06
AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxi... 48 7e-06
AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxi... 48 7e-06
Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical pr... 44 8e-05
AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide di... 44 8e-05
AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein. 44 8e-05
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 36 0.030
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 34 0.12
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 33 0.16
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 32 0.48
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 31 0.84
Z93388-5|CAB60295.1| 387|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z93388-4|CAB07662.1| 456|Caenorhabditis elegans Hypothetical pr... 31 1.1
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF025471-6|AAB71065.1| 243|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 29 4.5
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 29 4.5
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 28 5.9
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 28 5.9
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z31590-9|CAA83467.2| 581|Caenorhabditis elegans Hypothetical pr... 28 5.9
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 28 5.9
U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of ... 28 5.9
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 28 5.9
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 28 5.9
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL032660-3|CAA21753.2| 581|Caenorhabditis elegans Hypothetical ... 28 5.9
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 28 7.9
>U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide
dismutase) protein5 protein.
Length = 178
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Frame = +2
Query: 362 ETQSAVAMISDQSCCNKILGVVRLQQTAEGPLVA-DGSIDGLSPGRHGLHVYESGDLSQG 538
E++ AVA++ + + G V L Q AEG +G I GLSPG HG H+++ GD + G
Sbjct: 21 ESKRAVAVLRGTA----VFGTVWLTQKAEGEETEFEGEIKGLSPGLHGFHIHQYGDSTDG 76
Query: 539 CNSIXXXXXXXXXXXXXXXXXXXXXXXXXLGNITADANGRAAFRIVDDVLKVW---DVIG 709
C S LGN+ A A+G A + D V+ ++ VIG
Sbjct: 77 CTS--AGPHFNPCKMNHGGRDSVVRHVGDLGNVEAGADGVAKIKFSDKVVSLFGANTVIG 134
Query: 710 XSVGV 724
S+ V
Sbjct: 135 RSMVV 139
>X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc
superoxide dismutase protein.
Length = 158
Score = 48.0 bits (109), Expect = 7e-06
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Frame = +2
Query: 413 ILGVVRLQQTAEGP-LVADGSIDGLSPGRHGLHVYESGDLSQGCNSIXXXXXXXXXXXXX 589
+ G + + Q +E V +G I GL+PG HG HV++ GD + GC I
Sbjct: 14 VTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGC--ISAGPHFNPFGKTH 71
Query: 590 XXXXXXXXXXXXLGNITADANGRAAFRIVDDVLKVW---DVIGXSVGV 724
LGN+ A A+G A ++ D ++ ++ V+G S+ V
Sbjct: 72 GGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVV 119
>L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide
dismutase protein.
Length = 158
Score = 48.0 bits (109), Expect = 7e-06
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Frame = +2
Query: 413 ILGVVRLQQTAEGP-LVADGSIDGLSPGRHGLHVYESGDLSQGCNSIXXXXXXXXXXXXX 589
+ G + + Q +E V +G I GL+PG HG HV++ GD + GC I
Sbjct: 14 VTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGC--ISAGPHFNPFGKTH 71
Query: 590 XXXXXXXXXXXXLGNITADANGRAAFRIVDDVLKVW---DVIGXSVGV 724
LGN+ A A+G A ++ D ++ ++ V+G S+ V
Sbjct: 72 GGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVV 119
>AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform b protein.
Length = 158
Score = 48.0 bits (109), Expect = 7e-06
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Frame = +2
Query: 413 ILGVVRLQQTAEGP-LVADGSIDGLSPGRHGLHVYESGDLSQGCNSIXXXXXXXXXXXXX 589
+ G + + Q +E V +G I GL+PG HG HV++ GD + GC I
Sbjct: 14 VTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGC--ISAGPHFNPFGKTH 71
Query: 590 XXXXXXXXXXXXLGNITADANGRAAFRIVDDVLKVW---DVIGXSVGV 724
LGN+ A A+G A ++ D ++ ++ V+G S+ V
Sbjct: 72 GGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVV 119
>AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform a protein.
Length = 180
Score = 48.0 bits (109), Expect = 7e-06
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Frame = +2
Query: 413 ILGVVRLQQTAEGP-LVADGSIDGLSPGRHGLHVYESGDLSQGCNSIXXXXXXXXXXXXX 589
+ G + + Q +E V +G I GL+PG HG HV++ GD + GC I
Sbjct: 36 VTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGC--ISAGPHFNPFGKTH 93
Query: 590 XXXXXXXXXXXXLGNITADANGRAAFRIVDDVLKVW---DVIGXSVGV 724
LGN+ A A+G A ++ D ++ ++ V+G S+ V
Sbjct: 94 GGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVV 141
>Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical
protein F55H2.1 protein.
Length = 176
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Frame = +2
Query: 410 KILGVVRLQQTAEGPLVADGSIDGLSPGRHGLHVYESGDLSQGCNSIXXXXXXXXXXXXX 589
+++G + Q+ L +GS+ GL+ G+HG H++E GD GC +
Sbjct: 39 ELIGTIDFDQSGSF-LKLNGSVSGLAAGKHGFHIHEKGDTGNGC--LSAGGHYNPHKLSH 95
Query: 590 XXXXXXXXXXXXLGNITADANGRAAFRIVDDVLKV---WDVIGXSV 718
LGNI + A+G + D + + + +IG SV
Sbjct: 96 GAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSV 141
>AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide
dismutase protein.
Length = 221
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Frame = +2
Query: 410 KILGVVRLQQTAEGPLVADGSIDGLSPGRHGLHVYESGDLSQGCNSIXXXXXXXXXXXXX 589
+++G + Q+ L +GS+ GL+ G+HG H++E GD GC +
Sbjct: 39 ELIGTIDFDQSGSF-LKLNGSVSGLAAGKHGFHIHEKGDTGNGC--LSAGGHYNPHKLSH 95
Query: 590 XXXXXXXXXXXXLGNITADANGRAAFRIVDDVLKV---WDVIGXSV 718
LGNI + A+G + D + + + +IG SV
Sbjct: 96 GAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSV 141
>AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein.
Length = 176
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Frame = +2
Query: 410 KILGVVRLQQTAEGPLVADGSIDGLSPGRHGLHVYESGDLSQGCNSIXXXXXXXXXXXXX 589
+++G + Q+ L +GS+ GL+ G+HG H++E GD GC +
Sbjct: 39 ELIGTIDFDQSGSF-LKLNGSVSGLAAGKHGFHIHEKGDTGNGC--LSAGGHYNPHKLSH 95
Query: 590 XXXXXXXXXXXXLGNITADANGRAAFRIVDDVLKV---WDVIGXSV 718
LGNI + A+G + D + + + +IG SV
Sbjct: 96 GAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSV 141
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 35.9 bits (79), Expect = 0.030
Identities = 27/83 (32%), Positives = 41/83 (49%)
Frame = -1
Query: 378 TADCVSPKPWITAGLPVTEPTTSRTFALGSTVSTTNAPSLKTTSLIPS*VFNVLIVFSRN 199
T+ +P +A VT TT+++ STT AP K++S P V + I
Sbjct: 409 TSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPP--VKSTTIAPVTM 466
Query: 198 WSSTDESKFTRTSSLVVSIVVCN 130
S+T+++ FT TSS S VC+
Sbjct: 467 PSTTEKTTFTSTSSSTTSSPVCS 489
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Frame = -1
Query: 510 TWSPCLPGLSPSMLPSATRGPSAVCCSLTTPRILLQHDWSEIMATADCVSPKPWITAGLP 331
T SP L SP+ LP T PS V S T P L + + T+ +P + P
Sbjct: 615 TTSPTLAPTSPTKLP--TSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSP 672
Query: 330 VTEPT------TSRTFALGSTVSTTNAPSLKTTS 247
T PT T+ T +T +TT + T+
Sbjct: 673 TTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTT 706
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Frame = -1
Query: 510 TWSPCLPGLSPSMLPSATRGPSAVCCSLTTPRILLQHDWSEIMATADCVSPKPWITAGLP 331
T SP L SP+ LP T PS V S T P L + + T+ +P + P
Sbjct: 671 TTSPTLAPTSPTKLP--TSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSP 728
Query: 330 VTEPT------TSRTFALGSTVSTTNAPSLKTTS 247
T PT T+ T +T +TT + T+
Sbjct: 729 TTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQTT 762
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 33.5 bits (73), Expect = 0.16
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 3/96 (3%)
Frame = -1
Query: 525 SPDSYTWSPCLPGLSPSMLPSATRGPSAVCCS---LTTPRILLQHDWSEIMATADCVSPK 355
+P + T P +P+ + T P+ + TTP + T + K
Sbjct: 209 TPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTK 268
Query: 354 PWITAGLPVTEPTTSRTFALGSTVSTTNAPSLKTTS 247
P T P T PTT+ T T +TT A + K+T+
Sbjct: 269 PTTTTTTPTTTPTTTTT----PTTTTTTAKTTKSTT 300
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 33.5 bits (73), Expect = 0.16
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Frame = -1
Query: 483 SPSMLPSATRGPSAVCCSLTTPRILLQHDWSEIMATADCVSPKPWITAGLPVTEPTTSRT 304
+PS + S PS V S ++ + SE + P + +P + P S T
Sbjct: 1302 TPSTIGSTVTQPSTVSGSNSSGSTVTIGS-SEASTSGSSFKTSPSSISPVPTSSPIPSTT 1360
Query: 303 FAL---GSTVSTTNAPSLKTTSLIP--S*VFNVLIVFSRNWSSTDESKFTRTSSLVVS 145
FA GST+S + S+ TTSL P S + + + ++++SST E +SS V S
Sbjct: 1361 FASSTSGSTISDVS--SVSTTSLAPLSSSLPSTVPSSTQSFSSTSEGSSKASSSPVPS 1416
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 32.3 bits (70), Expect = 0.37
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = -1
Query: 363 SPKPWITAGLPVTEPTTSRTFALGSTVSTTNAPSLKTTSLIPS*VFNVLIVFSRNWSSTD 184
S +P +T+ T PTT + STT AP K++S P V + I S+T+
Sbjct: 380 SARPNVTS--TTTAPTTESS-TTPPVESTTTAPVTKSSSTPP--VKSTTIAPVTMPSTTE 434
Query: 183 ESKFTRTSSLVVSIVVCN 130
++ FT TSS S VC+
Sbjct: 435 KTTFTSTSSSTTSSPVCS 452
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.9 bits (69), Expect = 0.48
Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 9/136 (6%)
Frame = -1
Query: 525 SPDSYTWSPCLPGLS-PSMLPSATRGP-SAVCC-------SLTTPRILLQHDWSEIMATA 373
SP S T S +P + P + + + P +A+C S T +L +E +T+
Sbjct: 351 SPSSTTLSTSIPTTTTPEITSTLSSLPDNAICSYLDETTTSTTFTTTMLTSTTTEEPSTS 410
Query: 372 DCVSPKPWITAGLPVTEPTTSRTFALGSTVSTTNAPSLKTTSLIPS*VFNVLIVFSRNWS 193
+ ++ + TEPTT+ T + ST +T PS T + PS V S + S
Sbjct: 411 TTTTEVTSTSSTVTTTEPTTTLTTSTAST--STTEPSTSTVTTSPSTSPVTSTVTSSSSS 468
Query: 192 STDESKFTRTSSLVVS 145
ST + T T S S
Sbjct: 469 STTVTTPTSTESTSTS 484
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.9 bits (69), Expect = 0.48
Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 9/136 (6%)
Frame = -1
Query: 525 SPDSYTWSPCLPGLS-PSMLPSATRGP-SAVCC-------SLTTPRILLQHDWSEIMATA 373
SP S T S +P + P + + + P +A+C S T +L +E +T+
Sbjct: 351 SPSSTTLSTSIPTTTTPEITSTLSSLPDNAICSYLDETTTSTTFTTTMLTSTTTEEPSTS 410
Query: 372 DCVSPKPWITAGLPVTEPTTSRTFALGSTVSTTNAPSLKTTSLIPS*VFNVLIVFSRNWS 193
+ ++ + TEPTT+ T + ST +T PS T + PS V S + S
Sbjct: 411 TTTTEVTSTSSTVTTTEPTTTLTTSTAST--STTEPSTSTVTTSPSTSPVTSTVTSSSSS 468
Query: 192 STDESKFTRTSSLVVS 145
ST + T T S S
Sbjct: 469 STTVTTPTSTESTSTS 484
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 31.1 bits (67), Expect = 0.84
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = -1
Query: 462 ATRGPSAVCCSLTTPRILLQHDWSEIMATADCVSPKPWITAGLPVTEPTTSRTFALGSTV 283
AT S+ S TP +L + T +P P + PTT T ++ +TV
Sbjct: 74 ATTTLSSTTASTVTPTPILTTVTTTSTTTTVTTTPIPTTVTSTHI--PTTVTTTSIPTTV 131
Query: 282 STTNAPSLKTTSLIPS 235
+T P+ TT+ IP+
Sbjct: 132 PSTQLPTTVTTTPIPT 147
>Z93388-5|CAB60295.1| 387|Caenorhabditis elegans Hypothetical
protein T10C6.6b protein.
Length = 387
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -1
Query: 177 KFTRTSSLVVSIVVCNIKYIFRYVHVGLYAF 85
K + S L+V+++VC+I ++ Y HVG + F
Sbjct: 235 KMGKRSPLIVAMLVCSIGSLYFYAHVGPHMF 265
>Z93388-4|CAB07662.1| 456|Caenorhabditis elegans Hypothetical
protein T10C6.6a protein.
Length = 456
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -1
Query: 177 KFTRTSSLVVSIVVCNIKYIFRYVHVGLYAF 85
K + S L+V+++VC+I ++ Y HVG + F
Sbjct: 304 KMGKRSPLIVAMLVCSIGSLYFYAHVGPHMF 334
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = -1
Query: 432 SLTTPRILLQHDWSEIMATADCVSPKPWITAGLPVTEPTTSRTFALGST-VSTTNAPSLK 256
++T+P ++ W++ + PK I PV PTT+ T +T V TT++ +
Sbjct: 410 NVTSPPVIRPSYWTKHRVKST-KEPKTTIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTT 468
Query: 255 TTSLIPS*VFNVLIVFSRNWSSTDESKFTRTS 160
TT+ P V + + +T S T T+
Sbjct: 469 TTTTTPVPVTSTTTEPTTTTYTTSTSTSTTTT 500
>AF025471-6|AAB71065.1| 243|Caenorhabditis elegans Hypothetical
protein R52.8 protein.
Length = 243
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -1
Query: 423 TPRILLQHDWSEIMATADCVSPKPWITAGLPVTEPTTSRTFALGSTV 283
T + +D + T DC+ + +T EP T RTFAL T+
Sbjct: 65 TGEFISWNDLEKDYVTNDCIDVEVRVTIEKITDEPCTKRTFALSETL 111
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical protein
T01D3.3b protein.
Length = 1011
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 416 LGVVRLQQTAEGPLVADGSIDGLSPGRHGLHVYESGDLSQGCNSI 550
+G Q L G + L GRH + +++ GD S+GC+ +
Sbjct: 896 IGRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRV 940
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 416 LGVVRLQQTAEGPLVADGSIDGLSPGRHGLHVYESGDLSQGCNSI 550
+G Q L G + L GRH + +++ GD S+GC+ +
Sbjct: 687 IGRFTFSQLTSTALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRV 731
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Frame = -1
Query: 393 SEIMATADCVSP--KPWITAGLPVTEPTTSRTFALGSTVSTTNAPSLKTTSLIPS*VFNV 220
+EI T + V+ +P T P T TTS T T +TT P+ T++ +
Sbjct: 43 TEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
Query: 219 LIVFSRNWSSTDESKFTRTSSLVVSIVVCN 130
S ++T + ++ ++ CN
Sbjct: 103 TTTTSTTTTTTTTTTTATPTTTTTTMPPCN 132
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -1
Query: 282 STTNAPSLKTTSLIPS*VFNVLIVFSRNWSSTDES--KFTRTSS 157
STTNAP+ S P + ++++ S++ S TD S +F+ T S
Sbjct: 127 STTNAPTTGKDSTTPEIITGIVVINSKSESVTDMSTTRFSTTLS 170
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -1
Query: 363 SPKPWITAGLPVTEPTTSRTFALGSTVSTTNAPSLKTTSLI--PS*VFNVLIVFSRNWSS 190
SP WI G+P+ +SR+ ST S T + S + +I PS + + L S + ++
Sbjct: 555 SPSSWINRGVPL----SSRS----STSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTT 606
Query: 189 TDESKFTRTSSLVVSIVVCNI 127
T + TSS V S V N+
Sbjct: 607 TTTATVAPTSSTVPSTPVSNV 627
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -1
Query: 363 SPKPWITAGLPVTEPTTSRTFALGSTVSTTNAPSLKTTSLI--PS*VFNVLIVFSRNWSS 190
SP WI G+P+ +SR+ ST S T + S + +I PS + + L S + ++
Sbjct: 555 SPSSWINRGVPL----SSRS----STSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTT 606
Query: 189 TDESKFTRTSSLVVSIVVCNI 127
T + TSS V S V N+
Sbjct: 607 TTTATVAPTSSTVPSTPVSNV 627
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -1
Query: 363 SPKPWITAGLPVTEPTTSRTFALGSTVSTTNAPSLKTTSLI--PS*VFNVLIVFSRNWSS 190
SP WI G+P+ +SR+ ST S T + S + +I PS + + L S + ++
Sbjct: 558 SPSSWINRGVPL----SSRS----STSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTT 609
Query: 189 TDESKFTRTSSLVVSIVVCNI 127
T + TSS V S V N+
Sbjct: 610 TTTATVAPTSSTVPSTPVSNV 630
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -1
Query: 363 SPKPWITAGLPVTEPTTSRTFALGSTVSTTNAPSLKTTSLI--PS*VFNVLIVFSRNWSS 190
SP WI G+P+ +SR+ ST S T + S + +I PS + + L S + ++
Sbjct: 555 SPSSWINRGVPL----SSRS----STSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTT 606
Query: 189 TDESKFTRTSSLVVSIVVCNI 127
T + TSS V S V N+
Sbjct: 607 TTTATVAPTSSTVPSTPVSNV 627
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -1
Query: 363 SPKPWITAGLPVTEPTTSRTFALGSTVSTTNAPSLKTTSLI--PS*VFNVLIVFSRNWSS 190
SP WI G+P+ +SR+ ST S T + S + +I PS + + L S + ++
Sbjct: 555 SPSSWINRGVPL----SSRS----STSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTT 606
Query: 189 TDESKFTRTSSLVVSIVVCNI 127
T + TSS V S V N+
Sbjct: 607 TTTATVAPTSSTVPSTPVSNV 627
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -1
Query: 363 SPKPWITAGLPVTEPTTSRTFALGSTVSTTNAPSLKTTSLI--PS*VFNVLIVFSRNWSS 190
SP WI G+P+ +SR+ ST S T + S + +I PS + + L S + ++
Sbjct: 555 SPSSWINRGVPL----SSRS----STSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTT 606
Query: 189 TDESKFTRTSSLVVSIVVCNI 127
T + TSS V S V N+
Sbjct: 607 TTTATVAPTSSTVPSTPVSNV 627
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -1
Query: 363 SPKPWITAGLPVTEPTTSRTFALGSTVSTTNAPSLKTTSLI--PS*VFNVLIVFSRNWSS 190
SP WI G+P+ +SR+ ST S T + S + +I PS + + L S + ++
Sbjct: 558 SPSSWINRGVPL----SSRS----STSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTT 609
Query: 189 TDESKFTRTSSLVVSIVVCNI 127
T + TSS V S V N+
Sbjct: 610 TTTATVAPTSSTVPSTPVSNV 630
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -1
Query: 363 SPKPWITAGLPVTEPTTSRTFALGSTVSTTNAPSLKTTSLI--PS*VFNVLIVFSRNWSS 190
SP WI G+P+ +SR+ ST S T + S + +I PS + + L S + ++
Sbjct: 555 SPSSWINRGVPL----SSRS----STSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTT 606
Query: 189 TDESKFTRTSSLVVSIVVCNI 127
T + TSS V S V N+
Sbjct: 607 TTTATVAPTSSTVPSTPVSNV 627
>Z31590-9|CAA83467.2| 581|Caenorhabditis elegans Hypothetical
protein R01H10.1 protein.
Length = 581
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = -1
Query: 498 CLPGLSPSMLPSATRGPSAVCCSLTTPRILLQHDWSEIMATADCVSPKPWITAGLPVTEP 319
C+ L P+ +P++ VCC +TP I+ +++ +A CV+ +I + P
Sbjct: 491 CMYPLEPTEVPASMGDLLDVCCIGSTPHIVFAP--TKLAPSAKCVNGSVFINSSTLAKGP 548
Query: 318 T 316
T
Sbjct: 549 T 549
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = -1
Query: 363 SPKPWITAGLPVTEPTTSRTFALGSTVSTTNAPSLKTTSLI--PS*VFNVLIVFSRNWSS 190
SP WI G+P+ +SR+ ST S T + S + +I PS + + L S + ++
Sbjct: 555 SPSSWINRGVPL----SSRS----STSSVTRSSSTPVSEIISPPSSIHSQLSFPSVSNTT 606
Query: 189 TDESKFTRTSSLVVSIVVCNI 127
T + TSS V S V N+
Sbjct: 607 TTTATVAPTSSTVPSTPVSNV 627
>U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform c protein.
Length = 1375
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 MLTTKLEVL-VNFDSSVDDQFLEKTIKTLKTHDGIKE 250
M T ++ + +F +F+E+ ++T THDGIKE
Sbjct: 1010 MTNTGVQTMHTSFHIDEKPKFVEENLQTQNTHDGIKE 1046
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 MLTTKLEVL-VNFDSSVDDQFLEKTIKTLKTHDGIKE 250
M T ++ + +F +F+E+ ++T THDGIKE
Sbjct: 1010 MTNTGVQTMHTSFHIDEKPKFVEENLQTQNTHDGIKE 1046
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 MLTTKLEVL-VNFDSSVDDQFLEKTIKTLKTHDGIKE 250
M T ++ + +F +F+E+ ++T THDGIKE
Sbjct: 1010 MTNTGVQTMHTSFHIDEKPKFVEENLQTQNTHDGIKE 1046
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = -1
Query: 450 PSAVCCSLTTPRILLQHDWSEIMATADCVSPKPWITAGLPVTEPTTSRTFALGSTVSTTN 271
P+ + TTP+ + A + KP T P PTT+ T ++ +T++TT
Sbjct: 419 PTTTTTTTTTPKPTT--TTTTTTTPAPTTTQKPTTTTTTPA--PTTTSTTSIPTTIATTT 474
Query: 270 APSLK 256
A LK
Sbjct: 475 AAPLK 479
>AL032660-3|CAA21753.2| 581|Caenorhabditis elegans Hypothetical
protein R01H10.1 protein.
Length = 581
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = -1
Query: 498 CLPGLSPSMLPSATRGPSAVCCSLTTPRILLQHDWSEIMATADCVSPKPWITAGLPVTEP 319
C+ L P+ +P++ VCC +TP I+ +++ +A CV+ +I + P
Sbjct: 491 CMYPLEPTEVPASMGDLLDVCCIGSTPHIVFAP--TKLAPSAKCVNGSVFINSSTLAKGP 548
Query: 318 T 316
T
Sbjct: 549 T 549
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -1
Query: 360 PKPWITAGLPVTEPTTSRTFALGSTVSTTNAPSLKTTSLIP 238
P W T+ P +EPTT ST T+ S++ TS+ P
Sbjct: 2527 PSTWQTSNEPTSEPTTVPLET--STWQNTDGTSMEPTSVTP 2565
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 27.9 bits (59), Expect = 7.9
Identities = 25/88 (28%), Positives = 32/88 (36%)
Frame = -1
Query: 513 YTWSPCLPGLSPSMLPSATRGPSAVCCSLTTPRILLQHDWSEIMATADCVSPKPWITAGL 334
Y W C GL P T P+ TT + S +T+ S T
Sbjct: 246 YEWKKC--GLVPETTKPTTTTPT------TTTTTTIPSTTSSTTSTSTTTSVVTTTTV-T 296
Query: 333 PVTEPTTSRTFALGSTVSTTNAPSLKTT 250
TEPTTS + +T T PS +T
Sbjct: 297 STTEPTTSTSTPTTTTTMQTTTPSTTST 324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,042,738
Number of Sequences: 27780
Number of extensions: 318004
Number of successful extensions: 1182
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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