Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_J07
         (472 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    27   0.10 
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   2.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   5.0  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   6.7  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   6.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   8.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   8.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   8.8  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 27.1 bits (57), Expect = 0.10
 Identities = 10/29 (34%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = -1

Query: 139 EALYNXRLLLCFKREDVD-LFRRNAKFTI 56
           EAL+N  ++  F R+D++ + RRN+++ +
Sbjct: 97  EALWNFPMISVFSRQDIETIIRRNSRYPL 125


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = +3

Query: 15  FCL--YCISSLYDIEKIVNFAFLL 80
           FC   YC+  L ++ K +NF + L
Sbjct: 457 FCCKGYCMDLLKELSKTINFTYSL 480


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +1

Query: 106 NTTIIXNYIMPHFRIETNISRSKIPADFVVKAIPVLAKAL 225
           N T+I         +  N+++   PAD VV A  V+   L
Sbjct: 504 NDTVIVMMNFSKNPVTVNLTKLHPPADLVVYACNVVGSGL 543


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 315 DKHYKKQYPNHRINSEK 365
           + +YKK Y N+ IN E+
Sbjct: 110 NNNYKKLYKNYIINIEQ 126


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 315 DKHYKKQYPNHRINSEK 365
           + +YKK Y N+ IN E+
Sbjct: 110 NNNYKKLYKNYIINIEQ 126


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 4/16 (25%), Positives = 12/16 (75%)
 Frame = -3

Query: 362 LAIYPMVWILFFIMFI 315
           + ++ + W+ FF+M++
Sbjct: 333 MGVFVVCWLPFFLMYV 348


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 4/16 (25%), Positives = 12/16 (75%)
 Frame = -3

Query: 362 LAIYPMVWILFFIMFI 315
           + ++ + W+ FF+M++
Sbjct: 333 MGVFVVCWLPFFLMYV 348


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 4/16 (25%), Positives = 12/16 (75%)
 Frame = -3

Query: 362 LAIYPMVWILFFIMFI 315
           + ++ + W+ FF+M++
Sbjct: 333 MGVFVVCWLPFFLMYV 348


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,189
Number of Sequences: 438
Number of extensions: 2529
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)