Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_J05
         (861 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   1.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   1.2  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    24   2.1  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    24   2.1  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    24   2.1  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    24   2.1  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   4.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   8.4  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   8.4  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 334 PSIIVK-MDEYKYVDVSIEGSGLELNDAFKISSQNEQ 441
           PS++V    +Y Y+D  +E + L+L     ISS   Q
Sbjct: 286 PSVVVSDYSDYSYLDEKLERNDLDLEKYEGISSTPSQ 322



 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 484 HDSTWKGKIRINGNFIGRTNLV 549
           HD+ WK     +G  IG  NL+
Sbjct: 749 HDAEWKVGNHEDGYLIGVNNLI 770


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 659 ATLVVNIVSMTRSTLVITTGTV-PLVTENVSAS 564
           AT +  I + T +T   TT T  P  T+N SA+
Sbjct: 655 ATTITTITTTTTTTTTTTTTTTTPNTTQNASAT 687


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 397 LELNDAFKISSQNEQLAWAEWNSSNLYQKHDSTWKGKIR 513
           LE   + K  S++ +     + + N Y+K+  TWK + R
Sbjct: 30  LEERTSRKRYSRSREREQKSYKNENSYRKYRETWKERSR 68


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 397 LELNDAFKISSQNEQLAWAEWNSSNLYQKHDSTWKGKIR 513
           LE   + K  S++ +     + + N Y+K+  TWK + R
Sbjct: 30  LEERTSRKRYSRSREREQKSYKNENSYRKYRETWKERSR 68


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 397 LELNDAFKISSQNEQLAWAEWNSSNLYQKHDSTWKGKIR 513
           LE   + K  S++ +     + + N Y+K+  TWK + R
Sbjct: 30  LEERTSRKRYSRSREREQKSYKNENSYRKYRETWKERSR 68


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 397 LELNDAFKISSQNEQLAWAEWNSSNLYQKHDSTWKGKIR 513
           LE   + K  S++ +     + + N Y+K+  TWK + R
Sbjct: 30  LEERTSRKRYSRSREREQKSYKNENSYRKYRETWKERSR 68


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 579 FRHQRYGARGDHESRTGHRHDIHHQR 656
           F  Q  G RG+H    G  +DI ++R
Sbjct: 303 FNLQVRGTRGEHTEAEGGIYDISNKR 328


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 484 HDSTWKGKIRINGNFIGRTNLV 549
           HD+ WK     +G  IG  NL+
Sbjct: 515 HDAEWKVGNHEDGYLIGVNNLI 536


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 484 HDSTWKGKIRINGNFIGRTNLV 549
           HD+ WK     +G  IG  NL+
Sbjct: 430 HDAEWKVGNHEDGYLIGVNNLI 451


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 257,920
Number of Sequences: 438
Number of extensions: 6267
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)