Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_J01
         (882 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...   214   2e-55
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...   214   2e-55
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...   182   6e-46
AY118279-1|AAM48308.1|  427|Drosophila melanogaster AT13296p pro...    30   3.7  
AY069159-1|AAL39304.1|  440|Drosophila melanogaster GH18255p pro...    30   3.7  
AE014297-798|AAS65126.1|  427|Drosophila melanogaster CG8136-PC,...    30   3.7  
AE014297-797|AAN13398.1|  440|Drosophila melanogaster CG8136-PA,...    30   3.7  
AE014297-796|AAF54275.2|  441|Drosophila melanogaster CG8136-PB,...    30   3.7  

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score =  214 bits (522), Expect = 2e-55
 Identities = 113/234 (48%), Positives = 144/234 (61%)
 Frame = +3

Query: 180 NYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLK 359
           N  L  G++R+SK++M+ ++A Y+                  VK+IGG KNGG RTV LK
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82

Query: 360 RRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGL 539
           + K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GKRVVL+ +L SGL
Sbjct: 83  KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 142

Query: 540 LLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXE 719
           LLVTGPFA NSCPLRR+ QRYVI TS+++ LG FK+P+H ND YF               
Sbjct: 143 LLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGEA- 201

Query: 720 GDDIFATKKEKYVPSEQRKTDXXTVDEAVIKAIGARPDKKVLRGYLKAAFGLRS 881
             DIFA KKE++VP+EQRK D   VD A++K I A P+ K    YL+  F L S
Sbjct: 202 --DIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHS 253


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score =  214 bits (522), Expect = 2e-55
 Identities = 113/234 (48%), Positives = 144/234 (61%)
 Frame = +3

Query: 180 NYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLK 359
           N  L  G++R+SK++M+ ++A Y+                  VK+IGG KNGG RTV LK
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82

Query: 360 RRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGL 539
           + K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GKRVVL+ +L SGL
Sbjct: 83  KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 142

Query: 540 LLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXE 719
           LLVTGPFA NSCPLRR+ QRYVI TS+++ LG FK+P+H ND YF               
Sbjct: 143 LLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGEA- 201

Query: 720 GDDIFATKKEKYVPSEQRKTDXXTVDEAVIKAIGARPDKKVLRGYLKAAFGLRS 881
             DIFA KKE++VP+EQRK D   VD A++K I A P+ K    YL+  F L S
Sbjct: 202 --DIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHS 253


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score =  182 bits (443), Expect = 6e-46
 Identities = 104/234 (44%), Positives = 138/234 (58%)
 Frame = +3

Query: 180 NYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLK 359
           N  L  G++R+SK++M+ ++A Y+               + VV++           VP+K
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRL----------KDKKSPVVEKA---------KVPIK 63

Query: 360 RRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGL 539
           + K+ YPT+  ++       FS+H R  R NL  GTV ILLAGRH GKRVVL+ +L SGL
Sbjct: 64  KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 123

Query: 540 LLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXE 719
           LLVTGPFA NSCPLRR+ QRYVI TS+++ LG FK+P+H ND YF               
Sbjct: 124 LLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDKKTGEA- 182

Query: 720 GDDIFATKKEKYVPSEQRKTDXXTVDEAVIKAIGARPDKKVLRGYLKAAFGLRS 881
             DIFA KKE++VP+EQRK D   VD A++K I A P+ K    YL+  F L S
Sbjct: 183 --DIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMFALHS 234


>AY118279-1|AAM48308.1|  427|Drosophila melanogaster AT13296p
           protein.
          Length = 427

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +1

Query: 616 PPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSA 774
           P + H+ + NCQ  +  + ++   SA+N Q     +  SLPQ  RN+ H SSA
Sbjct: 42  PTKGHTTSENCQLPAQELETK---SATNEQGALGIMSVSLPQTTRNS-HQSSA 90


>AY069159-1|AAL39304.1|  440|Drosophila melanogaster GH18255p
           protein.
          Length = 440

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +1

Query: 616 PPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSA 774
           P + H+ + NCQ  +  + ++   SA+N Q     +  SLPQ  RN+ H SSA
Sbjct: 55  PTKGHTTSENCQLPAQELETK---SATNEQGALGIMSVSLPQTTRNS-HQSSA 103


>AE014297-798|AAS65126.1|  427|Drosophila melanogaster CG8136-PC,
           isoform C protein.
          Length = 427

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +1

Query: 616 PPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSA 774
           P + H+ + NCQ  +  + ++   SA+N Q     +  SLPQ  RN+ H SSA
Sbjct: 42  PTKGHTTSENCQLPAQELETK---SATNEQGALGIMSVSLPQTTRNS-HQSSA 90


>AE014297-797|AAN13398.1|  440|Drosophila melanogaster CG8136-PA,
           isoform A protein.
          Length = 440

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +1

Query: 616 PPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSA 774
           P + H+ + NCQ  +  + ++   SA+N Q     +  SLPQ  RN+ H SSA
Sbjct: 55  PTKGHTTSENCQLPAQELETK---SATNEQGALGIMSVSLPQTTRNS-HQSSA 103


>AE014297-796|AAF54275.2|  441|Drosophila melanogaster CG8136-PB,
           isoform B protein.
          Length = 441

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +1

Query: 616 PPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSA 774
           P + H+ + NCQ  +  + ++   SA+N Q     +  SLPQ  RN+ H SSA
Sbjct: 56  PTKGHTTSENCQLPAQELETK---SATNEQGALGIMSVSLPQTTRNS-HQSSA 104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,870,418
Number of Sequences: 53049
Number of extensions: 850148
Number of successful extensions: 2369
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2366
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)