Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_I19
(790 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 86 5e-18
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 86 6e-18
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 75 2e-14
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 70 3e-13
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 57 3e-09
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 45 1e-05
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 42 1e-04
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 39 0.001
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 38 0.002
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 37 0.003
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 36 0.005
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 36 0.007
SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr 2|... 28 1.3
SPBC17D1.02 |||diphthamide biosynthesis protein |Schizosaccharom... 28 1.8
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 27 3.1
SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr 2|... 27 4.0
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 26 5.4
SPAC664.03 |||RNA polymerase II associated Paf1 complex |Schizos... 26 7.1
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 26 7.1
SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase Rdh54... 25 9.4
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 86.2 bits (204), Expect = 5e-18
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 1/199 (0%)
Frame = +1
Query: 196 AGANIVALSRTRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVESLGHFDALVNNAAVAVC 375
AG +IV S+ + +LQ++ D ++ I KV+++LG D L+NNA +A
Sbjct: 33 AGIDIVDPSKVQDAALALQADVSKADQIETAI------EKVIQTLGPIDVLINNAGLADD 86
Query: 376 EPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIY 555
PF S ++D + ++ + V M + G+IVNI S L Y
Sbjct: 87 TPFEQLSHESWDHDVSLVLRGNYLTQRYVIPHMAKQGKGGSIVNIGSVNGHIYLGSPA-Y 145
Query: 556 SASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGW-SDPIKANEMLSKIPLGR 732
SA+KA L+ LT+A+A+ GP GIRVN P I + + P + M P+GR
Sbjct: 146 SAAKAGLENLTKALAVRYGPLGIRVNVCAPGTIWSPAWDERFKKHPDVGDRMKRWYPVGR 205
Query: 733 FGEISEVXNAVVFLLSERS 789
G +V AV+FL ++
Sbjct: 206 LGTPEDVARAVIFLADSKN 224
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 85.8 bits (203), Expect = 6e-18
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 3/199 (1%)
Frame = +1
Query: 199 GANIVALSRTRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVESLGHFDALVNNAAVAVCE 378
G N L T L + + ++ I DV D + + + ES+ D +V+ A V
Sbjct: 32 GRNEFHLKETLQSLSVAKGQQHTLTIADVQ-SDMKNLKSIFESV-EIDTVVHAAGVLQSS 89
Query: 379 PFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGA---IVNISSQASKAALKDHT 549
+ S D N+ + + +S++ + NK I+NISS+ S AL +
Sbjct: 90 LCVRTSEKEIDSIICTNLVSAIKLSKMAILEWFRNKNSERDRLILNISSRLSTYALPGTS 149
Query: 550 IYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSKIPLG 729
+Y+ASKA L++ T+ +A E+ GIRVNAI+P + T M S I+A K+P+G
Sbjct: 150 VYAASKAGLESFTKVLAAEVASKGIRVNAISPGYVDTPML----SSQIRAIAE-KKVPIG 204
Query: 730 RFGEISEVXNAVVFLLSER 786
R E+ +A FLL R
Sbjct: 205 RLASTDEIVDACTFLLDNR 223
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 74.5 bits (175), Expect = 2e-14
Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Frame = +1
Query: 319 VESLGHFDALVNNAAVA-VCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHG 495
++ LG D LVNN A V + D +D TF N+ + +++ M K+
Sbjct: 116 LKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVTKAAISHM---KSGS 172
Query: 496 AIVNISSQASKAALKDHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAKV 675
+IVN SS + D Y+++K A+ A TR ++ + +GIRVNA+ P I T + V
Sbjct: 173 SIVNCSSINAYVGRPDLLDYTSTKGAITAFTRGLSNQYAQHGIRVNAVAPGPIYTPL--V 230
Query: 676 GWSDPIKANEMLSKIPLGRFGEISEVXNAVVFL 774
+ P + E+ ++PLGR G+ EV + +FL
Sbjct: 231 SSTFPKEKIELSDQVPLGRMGQPVEVASCYLFL 263
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 70.1 bits (164), Expect = 3e-13
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
Frame = +1
Query: 199 GANIVALSRTRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVESL-----GHFDALVNNAA 363
G ++A +R +++L + + +D+ D + R+V + + G L+NNA
Sbjct: 29 GFQVLATARQVERMDNLTKA--GLQTLKLDVTDEDSVREVEQEVRKFTNGSLHYLINNAG 86
Query: 364 VAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKD 543
P +D + K DVN V+ +++ ++I K G IVN++S S
Sbjct: 87 APCSAPAIDLDIEDVSKVMDVNFYGVIRMNKAFQHQLIRAK--GTIVNVNSLVSYVPFAF 144
Query: 544 HTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 666
+ Y+ASKAAL A + + +EL P+G++V +I + T++
Sbjct: 145 NAAYNASKAALLAYSNTLRIELAPFGVQVTSIMTGGVQTKI 185
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 56.8 bits (131), Expect = 3e-09
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Frame = +1
Query: 199 GANIVALSRTRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVES-LGHFDALVNNAAVAVC 375
G N++A SR + S+ + + D+ E K + G+ D ++NNA +
Sbjct: 29 GYNVIACSRAPDTITIEHSKLLKLKLDVTDVKSVETAFKDAKRRFGNVDIVINNAGYGLV 88
Query: 376 EPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAALKDHTIY 555
F + + +VN V I++ M E+ G I+ ISS A ++Y
Sbjct: 89 GEFESYNIEEMHRQMNVNFWGVAYITKEALNLMRESGKGGRILQISSVAGYYPSPCLSMY 148
Query: 556 SASKAALDALTRAMALELGP-YGIRVNAINPTVIMTEMA--KVGWSDPIKANE 705
+ASK A++ L++ + EL P + I + + P + TE A + W+ P A E
Sbjct: 149 NASKFAVEGLSQTIMRELDPNWNIAITIVQPGGMQTEWASSNMQWAKPHPAYE 201
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 45.2 bits (102), Expect = 1e-05
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Frame = +1
Query: 184 ELWRAGANIVALSRTRSHLESLQSEYPS--------IDIVDVDIGDWEKTRKVVESLGHF 339
EL GAN+ ++RT + L+ +E + VD+ +E ++E L
Sbjct: 41 ELVLRGANVTIVARTVTKLQEAVAELSDSKIHEDQQVSFESVDLTSYESVHSMIERLPFC 100
Query: 340 -DALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKM--IENKTHGAIVNI 510
D +V+ A + F + PS F+K N A + + R+M I I+ +
Sbjct: 101 PDHVVHCAGSCIPGFFTELDPSVFEKQMRQNYLASVYVCHAAIRRMKEISPSYSRRILLV 160
Query: 511 SSQASKAALKDHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMT 660
S S + ++ YS KAA+ L ++ E Y I V+ P+ I++
Sbjct: 161 GSLLSSLPIIGYSAYSPVKAAVRNLADSLRQECILYDIEVSVYLPSTILS 210
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 41.9 bits (94), Expect = 1e-04
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 10/168 (5%)
Frame = +1
Query: 193 RAGANIVALSR---TRSHLESLQSEYPSIDIVDVDIGDWEKTR----KVVESLGHFDAL- 348
+ G + A +R + S L+ + ++ I+ +D+ + +V + + D L
Sbjct: 29 KEGVTVFASARGPGSASELKDWSKTHSNVHIIKLDVTSLRSAKDAAMQVEKVVKCIDVLW 88
Query: 349 VNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASK 528
VN+ +P L S + + NV +++ Q + E K + S A
Sbjct: 89 VNSGISKSFQPVLKTSDELWMSHYQTNVLGPIHVYQAFYHLLKEGKLKNIVFTSSMAACM 148
Query: 529 AALKDHTI--YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 666
++ +T Y SKAAL+ + ++ EL G V +I+P V+ T+M
Sbjct: 149 GGVRPNTYSAYGQSKAALNYTMKEISFELEKDGFVVVSIHPGVVNTDM 196
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 38.7 bits (86), Expect = 0.001
Identities = 27/89 (30%), Positives = 45/89 (50%)
Frame = +1
Query: 343 ALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQA 522
AL+N AA+A L S K F+ NV L I+ + ++++ + +VNI+S
Sbjct: 109 ALINAAAIAPKNHLLSISRQELQKCFETNVIGQLAITSALFPLLLQDP-NPHVVNIASSL 167
Query: 523 SKAALKDHTIYSASKAALDALTRAMALEL 609
+ + YS+SKAAL +L + E+
Sbjct: 168 AYFSAMGVGAYSSSKAALVSLHETLEEEV 196
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 37.5 bits (83), Expect = 0.002
Identities = 32/170 (18%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Frame = +1
Query: 193 RAGANIVALSR---TRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVESLGH----FDALV 351
R G + A +R + L+ +P++ V++D+ + + +S+ D L
Sbjct: 28 REGTTVFASARKPEAATELQEWSKSHPNVKTVELDVTSQQSANEAAQSVAKAVDGIDVLW 87
Query: 352 NNAAVAVCEPF---LDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQA 522
N+ + C+ + ++ ++ + NV +++ + + + KT I S
Sbjct: 88 LNSGI--CQSYYTVMEAPEEVWNAHYQTNVLGPIHVFKAFYPLLTKKKTRQVIFTSSECG 145
Query: 523 SKAALK--DHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEM 666
S + + Y SKAA++ + +++EL +I+P V+ T+M
Sbjct: 146 SMGDFRATGFSAYGQSKAAINFTMKELSVELADEHFTFISIHPGVVKTDM 195
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 37.1 bits (82), Expect = 0.003
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 18/182 (9%)
Frame = +1
Query: 184 ELWRAGANIVALSRTRSHLESLQSEYPSIDIV---DVDIGDWEKTRKVVESLGHFD---- 342
+L +G N+V +SRT+ L++L E ++ V + I + T + E L H D
Sbjct: 76 QLAMSGFNVVLISRTQEKLDALAKELETVAKVKTRTIAIDYTKTTAETFEKL-HQDLVGT 134
Query: 343 ---ALVNNAAVAVCEP--FLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHG---- 495
L+NN + P F + + D +N L+ ++ V M+ +
Sbjct: 135 PITVLINNVGQSHYMPTSFAETTVKEMDDIMHINCFGTLHTTKAVLSIMLRERQKNEKGP 194
Query: 496 --AIVNISSQASKAALKDHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMA 669
I+ + S A + Y+ SKA L + ++ E+ GI V N ++++ M+
Sbjct: 195 RCLILTMGSFAGLLPSPYLSTYAGSKAFLSNWSASLGEEVKKQGIDVWCFNSYLVVSAMS 254
Query: 670 KV 675
KV
Sbjct: 255 KV 256
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 36.3 bits (80), Expect = 0.005
Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 10/170 (5%)
Frame = +1
Query: 193 RAGANIVALSR---TRSHLESLQSEYPSIDIVDVDIGDWEKT----RKVVESLGHFDAL- 348
R G + A +R + L+ + ++ I+ +D+ E ++V + + D L
Sbjct: 28 RKGTVVFASARKPGAATKLQEWSKSHSNVHIIKLDVSSLESANEAAQEVTKVVDAVDVLW 87
Query: 349 VNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASK 528
VN+A P ++ ++ + NV +++ Q + + ++ + S S
Sbjct: 88 VNSAVFHSFGPVVNTPDDVWNSHYKTNVLGPIHVYQAFYPLIKKGRSKIIVFTSSLAGSM 147
Query: 529 AAL--KDHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAK 672
A + Y SKAAL+ + ++ EL G V +I+P + T+ A+
Sbjct: 148 GAFFPSSQSAYGQSKAALNYTMKEISFELQDEGFIVISIHPGAVRTDSAQ 197
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 35.9 bits (79), Expect = 0.007
Identities = 36/170 (21%), Positives = 75/170 (44%), Gaps = 10/170 (5%)
Frame = +1
Query: 193 RAGANIVALSR---TRSHLESLQSEYPSIDIVDVDIGDWEKT----RKVVESLGHFDAL- 348
R G + A +R + L+ + ++ I+ +DI E ++V +++G D L
Sbjct: 28 REGTVVFASARKPEAATELQEWSKSHSNVHIIKLDISSLESANEAAQEVAKAVGKVDVLW 87
Query: 349 VNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASK 528
VN+ L+ ++ + NV +++ Q + + ++ + S S
Sbjct: 88 VNSGIFHSFNTVLNTPDDVWNSHYKTNVLGPIHVYQAFYPLVKKGESKIIVFTSSLVGSM 147
Query: 529 AALK--DHTIYSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAK 672
A + + Y SKAAL+ + ++ EL G V +I+P ++ T+ A+
Sbjct: 148 GAFFPFNQSGYGQSKAALNFTMKEISFELQDEGFIVISIHPGMVRTDSAQ 197
>SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr
2|||Manual
Length = 482
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -3
Query: 737 PNLPSGILESISLAFIGSDQPTLAISVIITVGLIAFTLIPYGPSSKAIA 591
PN P L IS A Q ++ +GL+ L+PY PS + A
Sbjct: 334 PN-PMNFLRRISKADFYDIQTRTVAKYLVEIGLLDHKLLPYPPSQQCAA 381
>SPBC17D1.02 |||diphthamide biosynthesis protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 503
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = -3
Query: 782 SLRRKTTAFXTSDISPNLPSGI-LESISLAFIGSDQPTLAISVIITVGLIAFTLIPYGPS 606
+L +T++ + +LP + L+ ++L +IG D PTL+ S++++ + + + P
Sbjct: 188 NLEEASTSYTIPGRTYSLPKSLSLQDMTLLYIGPDSPTLS-SILMSHYSLVNQFLSFDPL 246
Query: 605 SKAI 594
S I
Sbjct: 247 SNKI 250
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 553 YSASKAALDALTRAMALELGPYGIRVNAINPTVIMTEMAK 672
Y SK A + A+A L YGI +++P VI TE+ +
Sbjct: 213 YGQSKYAQILYSIALAKRLEKYGIYSVSLHPGVIRTELTR 252
>SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 997
Score = 26.6 bits (56), Expect = 4.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 274 IVDVDIGDWEKTRKVVESLGHFDALVNNAAVAVCE 378
++ VDI D T + + ++GH L N AV C+
Sbjct: 586 VIPVDICDIRLTFQSMSAMGHLTFLDNRIAVVSCD 620
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +1
Query: 361 AVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQV 459
++++ E +DCSPS D+ D ++A+ I ++
Sbjct: 1122 SLSILEKLVDCSPSIIDEQVDTILEALRKIIEL 1154
>SPAC664.03 |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 457
Score = 25.8 bits (54), Expect = 7.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 322 ESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVN 429
E+ A VN+A+ V EPF+ NFD + VN
Sbjct: 259 ETAEEIQAKVNDASADVHEPFVYNHFRNFDASMHVN 294
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 25.8 bits (54), Expect = 7.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 259 YPSIDIVDVDIGDWEKTRKVVESLGHFDALVNNA 360
+P+ ++G W R +E+L +FDA N A
Sbjct: 593 FPNSGKTPTEVGVWSIVRGALETLQNFDARNNTA 626
>SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase
Rdh54|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 25.4 bits (53), Expect = 9.4
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = -1
Query: 376 HIQQQLRCSPTHQSDLKIQQPSSSSPNLLYQRLQCL*RGIHSEDFLSA---NEFVTMQLY 206
HI LR H ++K + PN +YQ + L + H L A + T
Sbjct: 133 HIDDSLR--DVHMPEMKRKFKPPLRPNTMYQTISALPKPRHDPTVLGALVMSRPKTWDPR 190
Query: 205 LHLHAIIQSQFLCRYLARHR 146
H+ +I FL ++L H+
Sbjct: 191 THVDVVI-DPFLSKHLYSHQ 209
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,880,670
Number of Sequences: 5004
Number of extensions: 54645
Number of successful extensions: 178
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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