Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_I19
         (790 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    55   9e-10
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   5.7  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.7  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   7.5  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   7.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   7.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.5  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 54.8 bits (126), Expect = 9e-10
 Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
 Frame = +1

Query: 217 LSRTRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVE----SLGHFDALVNNAAVAVCEPF 384
           + + ++ +E L+S+   +  +  D+ +     KV+E    +LG  D L+NNA + +    
Sbjct: 41  VDKMKTLVEELKSKPGKLVPLQCDLSNQNDILKVIEWVEKNLGAIDILINNATINIDVTL 100

Query: 385 LDCSPSNFDKTFDVNVKAVLNISQVVARKMIENK--THGAIVNISSQASKAAL---KDHT 549
            +    ++ K FD+N+  +  + Q V  K+++ K   +G IVNI+  +    L   ++  
Sbjct: 101 QNDEVLDWKKIFDINLLGLTCMIQEVL-KLMKKKGINNGIIVNINDASGLNLLPMNRNRP 159

Query: 550 IYSASKAALDALTRAMALELG--PYGIRVNAINPTVIMTEMAKVGWSDPIKANEMLSKIP 723
            Y ASK AL  LT  +  EL      I+V +I+P ++ T+M    W   +K N  L+  P
Sbjct: 160 AYLASKCALTTLTDCLRSELAQCESNIKVISISPDLVETDMT-AQW---LKENSRLALKP 215

Query: 724 LGRFGEISEVXNAVVFLL 777
                   +V N V+F L
Sbjct: 216 -------KDVSNCVLFAL 226


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 321 NNLPRLLPISYINVYNVYRGVFT 253
           N LP  + I+  N Y V +G FT
Sbjct: 52  NILPNNISIAGQNTYKVAKGAFT 74


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 752 TSDISPNLPSGILESISLAFIGSDQPT 672
           +S  SP+ PS    S+S   +GS+  T
Sbjct: 88  SSSPSPSSPSSFFSSVSPTSLGSENYT 114


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 3/19 (15%)
 Frame = -1

Query: 580 HPK---QLLKHCRWCGLSE 533
           HP+   +L K C+W G+ E
Sbjct: 340 HPRYRQELQKRCKWMGIHE 358


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 3/19 (15%)
 Frame = -1

Query: 580 HPK---QLLKHCRWCGLSE 533
           HP+   +L K C+W G+ E
Sbjct: 340 HPRYRQELQKRCKWMGIHE 358


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -1

Query: 385 KMVHIQQQLRCSPTHQSDLKIQQPSSSSPNLLYQRL 278
           K+   Q+QL+     +S  K+ +    +  LLYQ +
Sbjct: 364 KLALDQEQLKSKKLEESMRKLDEEMKRTDELLYQMI 399


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 758 FXTSDISPNLPSGILESISLAFIGSDQPT 672
           F T+  SP    G+LE  S AF G+  PT
Sbjct: 911 FATAASSP----GLLERASPAFSGTSSPT 935


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,525
Number of Sequences: 438
Number of extensions: 3412
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)