Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_I18
(746 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0473 - 3478660-3480338,3480507-3480609 40 0.003
03_06_0326 + 33150599-33150907,33151013-33151104,33151961-331520... 32 0.42
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 30 1.7
05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818 29 3.9
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 29 3.9
01_01_0472 - 3473096-3474288,3474833-3474938 29 3.9
03_06_0212 + 32400982-32402055 24 4.8
08_02_1120 + 24440589-24440619,24441217-24441268,24442551-244427... 29 5.2
06_03_1122 - 27775141-27775333,27775414-27775604,27775907-277770... 29 5.2
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 28 6.9
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 23 6.9
01_05_0080 - 17957276-17957676,17957810-17957921,17958001-179581... 28 9.1
>01_01_0473 - 3478660-3480338,3480507-3480609
Length = 593
Score = 39.5 bits (88), Expect = 0.003
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +2
Query: 344 KRLRRDSSGNGTTAPPSPWETKRLKIDLIAAKAQITKLESRVNH-QHTIRKEMQILFEEE 520
+++R++ G+ T LK DL A + ++LESR+N +HTI ++ F +E
Sbjct: 353 EQVRKELEGSRTEVAELQATINNLKADLGRALEEKSQLESRINDLEHTIACNLE-EFSQE 411
Query: 521 KASLIEQHKRDERAVSDMEDXXXXXXXXXXXXKDEFNTAAKEHKDLKANWDKEKTDLHKQ 700
K+SL + ++ + A + +E + + E + + +K+ +DL++
Sbjct: 412 KSSLGAEIQKLKEANASLE-------GKLTSTESQLQQLHAEKSEASISSEKQISDLNQA 464
Query: 701 IADLXDKL 724
IADL KL
Sbjct: 465 IADLETKL 472
>03_06_0326 +
33150599-33150907,33151013-33151104,33151961-33152057,
33152585-33152656,33152750-33152812,33152905-33153045,
33153603-33153698,33154120-33154404,33154692-33154851,
33154947-33155089,33155688-33155861,33156386-33156652,
33156737-33156856
Length = 672
Score = 32.3 bits (70), Expect = 0.42
Identities = 39/172 (22%), Positives = 76/172 (44%), Gaps = 6/172 (3%)
Frame = +2
Query: 83 LKINQEYKLNASQYKKMAKESDMSLYS----DVLEPFRRVINTEPPKDKLSASTNLNFSD 250
L +++E ++N ++ + D L D L+ RV EPP D L+ L+
Sbjct: 276 LDLDRESQINVKYWEALMVVCDWELGEARKRDALDR-ARVRGEEPPPDVLAEERGLH--- 331
Query: 251 STQSIKEGLSNLLTFGKRKSSIGSVDDVTPDKRLRRDSSGNGTTAPPSPWETKRLKIDLI 430
SI+ + +LL GK + + + + ++R +GT WE ++ +
Sbjct: 332 --ASIEGDVKDLLE-GKTSTELEEMQSQI-ESQMR-----SGTAKVVEYWEAILKRLHIY 382
Query: 431 AAKAQITKLESRVNHQHTIRKEMQILFEEEKAS--LIEQHKRDERAVSDMED 580
AKA + ++ + + +H R E E++K S I+ ++D + D +D
Sbjct: 383 KAKACLREIHASILRKHLHRLEHPDSIEQDKESEDEIDAKEKDATHIDDDDD 434
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +2
Query: 458 ESRVNHQHTIRKEMQILFEEEKASLIEQHKRDERAVSDMED 580
E R+ Q T +K+ + F+E++ASL++Q ++ V+ + +
Sbjct: 244 EKRLLDQQTAQKKQAMKFQEQEASLLDQLSSTKKTVTSLSE 284
>05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818
Length = 743
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/41 (26%), Positives = 27/41 (65%)
Frame = +2
Query: 458 ESRVNHQHTIRKEMQILFEEEKASLIEQHKRDERAVSDMED 580
E ++ ++H +K+ +F+E++ASL++Q +R V+ + +
Sbjct: 174 EKQIWNEHAEQKKQARMFQEKEASLLDQLTLTKRTVTSLNE 214
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +2
Query: 218 LSASTNLNFSDSTQSIKEGLSNLLTFGKRKSSIGSVDDVTPDKRL------RRDSSGNGT 379
+S+ + + + Q K G+ + G +S G VD T ++ R +SSG
Sbjct: 437 VSSQQSQSSNQFLQQEKPGIGTMPVDGGMPNSFGGVDQTTKKRKKPGSSSGRANSSGTAN 496
Query: 380 TAPPSP 397
TA PSP
Sbjct: 497 TAGPSP 502
>01_01_0472 - 3473096-3474288,3474833-3474938
Length = 432
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/98 (22%), Positives = 49/98 (50%)
Frame = +2
Query: 452 KLESRVNHQHTIRKEMQILFEEEKASLIEQHKRDERAVSDMEDXXXXXXXXXXXXKDEFN 631
KL+S + I+ +++L EE + L+ Q+K+ E + ++ K+E
Sbjct: 239 KLQSSQEEINNIKNSLEVL-SEEHSRLLGQNKKLEAEIVNL--------------KEEIA 283
Query: 632 TAAKEHKDLKANWDKEKTDLHKQIADLXDKLLEANVSN 745
+ +++++ + D E +++AD +KLL+ +SN
Sbjct: 284 SDRQQYEEKLSRSDAEIDKCRQELADASEKLLQEKLSN 321
>03_06_0212 + 32400982-32402055
Length = 357
Score = 24.2 bits (50), Expect(2) = 4.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 384 HHHHHGKQNV*RL 422
HHHHH +Q + RL
Sbjct: 297 HHHHHHQQQLQRL 309
Score = 23.0 bits (47), Expect(2) = 4.8
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 372 MEPQHHHHHGKQ 407
M HHHHH +Q
Sbjct: 294 MSGHHHHHHQQQ 305
>08_02_1120 +
24440589-24440619,24441217-24441268,24442551-24442731,
24442829-24443048,24443489-24443640,24443724-24443762,
24446699-24446705,24447081-24447099,24447100-24447399,
24448125-24448164,24448417-24448633,24448915-24449060,
24449131-24449169,24449707-24449805
Length = 513
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 146 DMSLYSDVLEPFRRVINTEPPKDKLSASTNLNFSDSTQ---SIKEGLSNLLTFGKRKSSI 316
D +L+ D+ + V++ + +DK +LNF+ T+ + G+ NL R+S
Sbjct: 83 DHNLFGDLAHMLQDVLHYQSVRDKFMGYYHLNFTTKTKEADDLDAGIDNLFFVEIRRSGR 142
Query: 317 GSVDDV 334
G +++
Sbjct: 143 GKHEEM 148
>06_03_1122 -
27775141-27775333,27775414-27775604,27775907-27777099,
27777206-27777353,27777534-27777609,27777696-27777818,
27777886-27778050,27778169-27778259,27778580-27778664,
27778745-27778900,27778992-27779048,27779138-27779236,
27779381-27779499,27780145-27780202
Length = 917
Score = 28.7 bits (61), Expect = 5.2
Identities = 27/124 (21%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Frame = +2
Query: 95 QEYKLNASQYKKMAKESDMSLYSDV---LEPFRRVINTEPPKDKLSASTNLNFSDSTQSI 265
Q + Q+++M ++ +M+ Y V L PF + +++ ++ T L FS
Sbjct: 548 QSQCMQVPQHQQMQQQKNMTNYQSVPNALSPFSQ-LSSPSQSSPMTLQTVLPFSQPQSYP 606
Query: 266 KEGLSNLLTFGKRKSSIGSVDDVTPDKRLRRDSSGNGTTAP-PSPWETKRLKID-LIAAK 439
+S+L S++ + + S T P P PW +KR+ ++ L+ ++
Sbjct: 607 DTSMSSLSP--SNTSTMHNALRPFSSEAPSHLSMPRPTAVPVPDPWSSKRVAVESLLPSR 664
Query: 440 AQIT 451
Q+T
Sbjct: 665 PQVT 668
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 28.3 bits (60), Expect = 6.9
Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 2/126 (1%)
Frame = +2
Query: 200 EPPKDKLSASTNLNFSDSTQSIKEGLSNLLTFGKRKSSIGSVDDVTPDKRLRRDSSGNGT 379
EP K + A L T+ K+G S + S D P K+++ DS+ +GT
Sbjct: 297 EPAKPTIPAKRPL-----TKDTKKGQSKDESEDSSDESSEESGDEPPQKKIK-DSTTSGT 350
Query: 380 TAPPSPWETKRLKIDLIAAK--AQITKLESRVNHQHTIRKEMQILFEEEKASLIEQHKRD 553
T P K + D + + + + V + T K++Q +E +S E + D
Sbjct: 351 TKPSPKATKKEISSDDESDEDDSSDESSDEDVKQKQTQAKKVQAPVAQESSSSDESSEED 410
Query: 554 ERAVSD 571
SD
Sbjct: 411 SDMESD 416
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 23.4 bits (48), Expect(2) = 6.9
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 381 QHHHHHGKQNV 413
QHHHHH Q +
Sbjct: 76 QHHHHHHHQQL 86
Score = 23.0 bits (47), Expect(2) = 6.9
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +3
Query: 378 PQHHHHH 398
P HHHHH
Sbjct: 60 PDHHHHH 66
>01_05_0080 -
17957276-17957676,17957810-17957921,17958001-17958126,
17958199-17958331,17960069-17960193,17960314-17960409,
17960430-17960621,17960694-17960800,17961318-17961426,
17961538-17961624,17963017-17963103,17964254-17964379
Length = 566
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/68 (26%), Positives = 28/68 (41%)
Frame = +2
Query: 194 NTEPPKDKLSASTNLNFSDSTQSIKEGLSNLLTFGKRKSSIGSVDDVTPDKRLRRDSSGN 373
N P + +N + S+K L ++ KRKSS P K++ D + N
Sbjct: 412 NLLSPSTRPLLRSNKRVVTNNPSVKVRLWSIQISDKRKSSTDLSTSQPPLKKMTTDGAMN 471
Query: 374 GTTAPPSP 397
T+ P P
Sbjct: 472 SMTSAPMP 479
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,365,640
Number of Sequences: 37544
Number of extensions: 284842
Number of successful extensions: 1210
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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