Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_I18
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 36 0.023
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 33 0.28
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 33 0.28
Z74043-12|CAA98548.1| 503|Caenorhabditis elegans Hypothetical p... 31 0.66
Z74040-7|CAA98515.1| 503|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z81464-2|CAB03859.1| 249|Caenorhabditis elegans Hypothetical pr... 31 0.87
AL110499-3|CAE18038.1| 437|Caenorhabditis elegans Hypothetical ... 23 2.4
U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical pr... 29 3.5
U50308-6|AAG24025.2| 936|Caenorhabditis elegans Dispatched fami... 29 3.5
Z78416-6|CAD44098.2| 624|Caenorhabditis elegans Hypothetical pr... 29 4.6
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 4.6
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 4.6
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 4.6
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 4.6
AF016444-6|AAB65933.1| 330|Caenorhabditis elegans Serpentine re... 29 4.6
Z92829-5|CAB07345.1| 324|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr... 28 6.1
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 28 6.1
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ... 28 6.1
AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical ... 28 6.1
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 28 8.1
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical pr... 28 8.1
U41995-1|AAA83459.1| 301|Caenorhabditis elegans Serpentine rece... 28 8.1
AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein. 28 8.1
AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like ... 28 8.1
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 36.3 bits (80), Expect = 0.023
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +2
Query: 401 ETKRLKIDLIAAKAQI-TKLESRVNHQHTIRKEMQIL---FEEEKASLIEQHKRDERAVS 568
E R+KID + + ++ +KLE V + +E+++ FEE +A L ++E
Sbjct: 631 ELSRVKIDELQSSIEVLSKLEREVQSSNLQNEELKLSLRNFEELQADLAMSKAKNEELEQ 690
Query: 569 DMEDXXXXXXXXXXXXKDEFNTAAKEHKDLKANWDKEKTDLHKQIADL 712
+ED EF+ + K++K WD + + + IA L
Sbjct: 691 QIEDSSR-----------EFSVITEASKEMKLKWDSSEAQMSEMIASL 727
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 33.1 bits (72), Expect = 0.21
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Frame = +2
Query: 407 KRLKIDLIAAKAQITKLESRVNHQHTIRKEMQILFEEEKASLIEQHKRDERAVSDMEDXX 586
++L++ Q K+ S QH + E+ + E S IE K+D++ + E
Sbjct: 66 QKLQLAFAELDEQSEKINSLETQQHKLVAELSKMEIERSNSAIEIMKKDKQLRTTEEQLI 125
Query: 587 XXXXXXXXXXKD------EFNTAAKEHKDLKANWDKEKTDLHKQIADLXDKLLEAN 736
D E +A +E +DKEK+DL + I + KL E+N
Sbjct: 126 MMANLGEELGNDAKRYRSELESAHEELYQTYTIFDKEKSDLCELIEEQTKKLTESN 181
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/87 (22%), Positives = 39/87 (44%)
Frame = +2
Query: 458 ESRVNHQHTIRKEMQILFEEEKASLIEQHKRDERAVSDMEDXXXXXXXXXXXXKDEFNTA 637
E +VNH IR ++ E++ L E R++R+ D+E ++ +
Sbjct: 1027 EDKVNHLEKIRNKL----EQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQENIDEI 1082
Query: 638 AKEHKDLKANWDKEKTDLHKQIADLXD 718
K+ D++ +++ DLH A L +
Sbjct: 1083 TKQKHDVETTLKRKEEDLHHTNAKLAE 1109
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/87 (22%), Positives = 39/87 (44%)
Frame = +2
Query: 458 ESRVNHQHTIRKEMQILFEEEKASLIEQHKRDERAVSDMEDXXXXXXXXXXXXKDEFNTA 637
E +VNH IR ++ E++ L E R++R+ D+E ++ +
Sbjct: 1027 EDKVNHLEKIRNKL----EQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQENIDEI 1082
Query: 638 AKEHKDLKANWDKEKTDLHKQIADLXD 718
K+ D++ +++ DLH A L +
Sbjct: 1083 TKQKHDVETTLKRKEEDLHHTNAKLAE 1109
>Z74043-12|CAA98548.1| 503|Caenorhabditis elegans Hypothetical
protein T19B10.1 protein.
Length = 503
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 350 LRRDSSGNGTTAPPSPWETKRLKIDLIAAKAQITKLESRVNHQH 481
L D S +G T P+ KR +D+I+ A K+++++NH H
Sbjct: 165 LLSDFSASGETVDIFPY-VKRCALDIISETAMGIKIDAQINHDH 207
>Z74040-7|CAA98515.1| 503|Caenorhabditis elegans Hypothetical
protein T19B10.1 protein.
Length = 503
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 350 LRRDSSGNGTTAPPSPWETKRLKIDLIAAKAQITKLESRVNHQH 481
L D S +G T P+ KR +D+I+ A K+++++NH H
Sbjct: 165 LLSDFSASGETVDIFPY-VKRCALDIISETAMGIKIDAQINHDH 207
>Z81464-2|CAB03859.1| 249|Caenorhabditis elegans Hypothetical
protein C08E8.3 protein.
Length = 249
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -2
Query: 610 LFSPTYQLQPIFHITDSSFISLVLFYKRCLLFFKQYLHLFTYSMLVVYSRF*FG 449
+FS + L PI + SSF S VL K + + L ++ML++ + F FG
Sbjct: 53 IFSSIFNLNPIHKTSTSSFTSKVLIIKVSINTDTKTSFLEKHTMLIILALFCFG 106
>AL110499-3|CAE18038.1| 437|Caenorhabditis elegans Hypothetical
protein Y62F5A.10 protein.
Length = 437
Score = 23.0 bits (47), Expect(3) = 2.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 381 QHHHHHGKQ 407
QHHHHH Q
Sbjct: 12 QHHHHHHHQ 20
Score = 22.6 bits (46), Expect(3) = 2.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 384 HHHHHGKQNV 413
HHHHH K +V
Sbjct: 15 HHHHHQKGSV 24
Score = 20.6 bits (41), Expect(3) = 2.4
Identities = 6/15 (40%), Positives = 8/15 (53%)
Frame = +3
Query: 354 EETQVVMEPQHHHHH 398
+E + HHHHH
Sbjct: 4 QEKKPKKHQHHHHHH 18
>U70845-1|AAB09098.1| 79|Caenorhabditis elegans Hypothetical
protein F22H10.3 protein.
Length = 79
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 294 LVKESRVSVA*MM*HQIRGLEETQVVME-PQHHHHH 398
+V V VA MM + G+ VV+E P HHHHH
Sbjct: 34 MVAPMPVPVAPMMAAPMYGMPPPVVVIEEPYHHHHH 69
>U50308-6|AAG24025.2| 936|Caenorhabditis elegans Dispatched family
protein 2 protein.
Length = 936
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 116 SQYKKMAKESDMSLYS---DVLEPFRRVINTEPPKDKLSASTNLNFSDSTQSIKE 271
S Y K +K + YS D L+ +RR++N E K +L T+++++D E
Sbjct: 609 SPYNKPSKNFSQAHYSLDTDKLDFYRRIVNLESKKYQLVNYTHVSWADKILQANE 663
>Z78416-6|CAD44098.2| 624|Caenorhabditis elegans Hypothetical
protein C23H4.7 protein.
Length = 624
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 140 ESDMSLYSDVLEPFRRVINTEPPKDKLSASTNLNFSDSTQSIKEGLSN 283
ES + +S ++EP ++ +S STN+ F+ + Q I N
Sbjct: 536 ESQLKYWSSIVEPRTTAHANNATQENISTSTNVLFTSTAQYISREFKN 583
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 28.7 bits (61), Expect = 4.6
Identities = 26/115 (22%), Positives = 49/115 (42%)
Frame = +2
Query: 401 ETKRLKIDLIAAKAQITKLESRVNHQHTIRKEMQILFEEEKASLIEQHKRDERAVSDMED 580
E +LK+D + + ++ +L+ ++ RKE++ L E+ E R S +
Sbjct: 836 EHDQLKVDHLHTEEEVERLKEKM------RKELEKLNEQNDGDRAEWSNERNRLESSKNE 889
Query: 581 XXXXXXXXXXXXKDEFNTAAKEHKDLKANWDKEKTDLHKQIADLXDKLLEANVSN 745
+D KE K++ D E D H++ DL DKL + +++
Sbjct: 890 AVTELQERVQKLEDVVKE--KEDKEIALRRDLE--DSHEKSRDLDDKLRKMELTD 940
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 28.7 bits (61), Expect = 4.6
Identities = 26/115 (22%), Positives = 49/115 (42%)
Frame = +2
Query: 401 ETKRLKIDLIAAKAQITKLESRVNHQHTIRKEMQILFEEEKASLIEQHKRDERAVSDMED 580
E +LK+D + + ++ +L+ ++ RKE++ L E+ E R S +
Sbjct: 836 EHDQLKVDHLHTEEEVERLKEKM------RKELEKLNEQNDGDRAEWSNERNRLESSKNE 889
Query: 581 XXXXXXXXXXXXKDEFNTAAKEHKDLKANWDKEKTDLHKQIADLXDKLLEANVSN 745
+D KE K++ D E D H++ DL DKL + +++
Sbjct: 890 AVTELQERVQKLEDVVKE--KEDKEIALRRDLE--DSHEKSRDLDDKLRKMELTD 940
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 28.7 bits (61), Expect = 4.6
Identities = 26/115 (22%), Positives = 49/115 (42%)
Frame = +2
Query: 401 ETKRLKIDLIAAKAQITKLESRVNHQHTIRKEMQILFEEEKASLIEQHKRDERAVSDMED 580
E +LK+D + + ++ +L+ ++ RKE++ L E+ E R S +
Sbjct: 596 EHDQLKVDHLHTEEEVERLKEKM------RKELEKLNEQNDGDRAEWSNERNRLESSKNE 649
Query: 581 XXXXXXXXXXXXKDEFNTAAKEHKDLKANWDKEKTDLHKQIADLXDKLLEANVSN 745
+D KE K++ D E D H++ DL DKL + +++
Sbjct: 650 AVTELQERVQKLEDVVKE--KEDKEIALRRDLE--DSHEKSRDLDDKLRKMELTD 700
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 28.7 bits (61), Expect = 4.6
Identities = 26/115 (22%), Positives = 49/115 (42%)
Frame = +2
Query: 401 ETKRLKIDLIAAKAQITKLESRVNHQHTIRKEMQILFEEEKASLIEQHKRDERAVSDMED 580
E +LK+D + + ++ +L+ ++ RKE++ L E+ E R S +
Sbjct: 836 EHDQLKVDHLHTEEEVERLKEKM------RKELEKLNEQNDGDRAEWSNERNRLESSKNE 889
Query: 581 XXXXXXXXXXXXKDEFNTAAKEHKDLKANWDKEKTDLHKQIADLXDKLLEANVSN 745
+D KE K++ D E D H++ DL DKL + +++
Sbjct: 890 AVTELQERVQKLEDVVKE--KEDKEIALRRDLE--DSHEKSRDLDDKLRKMELTD 940
>AF016444-6|AAB65933.1| 330|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 7 protein.
Length = 330
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = -2
Query: 577 FHITDSSFISLVLFYKRCLLFFKQYLHLFTYSMLVVYSRF*FGYLCFCSNQINLQT 410
F + S ++ L+ Q LF ++++++ FG+ CSN+I L T
Sbjct: 26 FQLASSLLALTMVIVASYSLWTAQVARLFHVNVIIIFQVHWFGFFLHCSNRIVLHT 81
>Z92829-5|CAB07345.1| 324|Caenorhabditis elegans Hypothetical
protein F10A3.5 protein.
Length = 324
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = -2
Query: 625 LIF*LLFSPTYQLQPIFHITDSSFISLVLFYKRCLLFFKQYLHLFTYSMLVVYSRF*FGY 446
L+ L+F ++ + ++F + +F+ C + K +LH+ S +V GY
Sbjct: 27 LLLFLIFETPKKVFGSYKYLMAAFSVVGIFFSFCDFYMKPHLHITKTSFIVFTDLKLLGY 86
Query: 445 LCFCSNQINLQTFC 404
F + Q+ L T C
Sbjct: 87 SYF-TGQLALATLC 99
>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 38 YCYLKA-K*QLKFNR*LKINQEYKLNASQYKKMAKESDMSLYS 163
Y +L A +L NR K+NQ + +AS + KESD+ L+S
Sbjct: 596 YTFLHATNAELVLNRFDKLNQSWIRSASTSSTVLKESDLMLFS 638
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 28.3 bits (60), Expect = 6.1
Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Frame = +2
Query: 401 ETKRLKIDLIAAKAQITKLESRVNHQHTIRKEMQILFEEEKASL---IEQHKRDERAVSD 571
+ + L L+ +++++++ R + + R++++ E +A L IE+ +++ A
Sbjct: 1087 KAEELTNQLMRKESELSQISIRNDEELAARQQLEREIREIRAQLDDAIEETNKEQAARQK 1146
Query: 572 MEDXXXXXXXXXXXXKDEF---NTAAKEHKDLKANWDKEKTDLHKQIAD 709
E K E N H LKA D+E L KQ+ +
Sbjct: 1147 AEKARRDMAEELESYKQELEESNDKTVLHSQLKAKRDEEYAHLQKQLEE 1195
>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 38 YCYLKA-K*QLKFNR*LKINQEYKLNASQYKKMAKESDMSLYS 163
Y +L A +L NR K+NQ + +AS + KESD+ L+S
Sbjct: 596 YTFLHATNAELVLNRFDKLNQSWIRSASTSSTVLKESDLMLFS 638
>AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical
protein M03F8.3 protein.
Length = 744
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 86 KINQEYKLNASQYKKMAKESDMSLYSDVLEPFRRVINTEPPKDK-LSASTNLNFSDSTQS 262
K + ++ A Q + AKE ++ L + P + T+P + K F D +
Sbjct: 26 KAPAQLQITAEQLLREAKERELEL----IPPAPKTKITDPDELKEYQRKKRKEFEDGIRK 81
Query: 263 IKEGLSNLLTFGKRKSSIGSV 325
+ L+N + +GK + SIG +
Sbjct: 82 NRMQLANWIKYGKWEESIGEI 102
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Frame = +2
Query: 401 ETKRLKIDLIAAKAQITKLESRVNHQHTIRKEMQILFEEEKASL---IEQHKRDERAVSD 571
+ + L L+ +++++++ R + + R++++ E +A L IE+ +++ A
Sbjct: 1087 KAEELTNQLMRKESELSQISIRNDEELAARQQLEREIREIRAQLDDAIEETNKEKAARQK 1146
Query: 572 MEDXXXXXXXXXXXXKDEF---NTAAKEHKDLKANWDKEKTDLHKQIAD 709
E K E N H LKA D+E L KQ+ +
Sbjct: 1147 AEKARRDMAEELESYKQELEESNDKTVLHSQLKAKRDEEYAHLQKQLEE 1195
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Frame = +2
Query: 401 ETKRLKIDLIAAKAQITKLESRVNHQHTIRKEMQILFEEEKASL---IEQHKRDERAVSD 571
+ + L L+ +++++++ R + + R++++ E +A L IE+ +++ A
Sbjct: 1087 KAEELTNQLMRKESELSQISIRNDEELAARQQLEREIREIRAQLDDAIEETNKEKAARQK 1146
Query: 572 MEDXXXXXXXXXXXXKDEF---NTAAKEHKDLKANWDKEKTDLHKQIAD 709
E K E N H LKA D+E L KQ+ +
Sbjct: 1147 AEKARRDMAEELESYKQELEESNDKTVLHSQLKAKRDEEYAHLQKQLEE 1195
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical
protein F20C5.2b protein.
Length = 1130
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Frame = +2
Query: 425 LIAAKAQITKLESRVNHQHT-IRKEMQILFEE-----EKASLIEQHKRD----ERAVSDM 574
LI + +LESR QH + K+ + L E+ E +E+ + D ++ SD+
Sbjct: 434 LIVGSEEDGRLESRTKEQHAQLEKKRRELAEQKRREREMVEALERQEEDTVDLKQTFSDL 493
Query: 575 EDXXXXXXXXXXXXKDEFNTAAKEHKDLKANWDKEKTDLHKQIADLXDKL 724
+ A E +D+ + E+ DL + IA++ +L
Sbjct: 494 RTEVEAKTKKLKKMLIKLRQARNEIRDVSGAYSDERQDLDQTIAEVSKEL 543
>Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical
protein F20C5.2a protein.
Length = 782
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Frame = +2
Query: 425 LIAAKAQITKLESRVNHQHT-IRKEMQILFEE-----EKASLIEQHKRD----ERAVSDM 574
LI + +LESR QH + K+ + L E+ E +E+ + D ++ SD+
Sbjct: 448 LIVGSEEDGRLESRTKEQHAQLEKKRRELAEQKRREREMVEALERQEEDTVDLKQTFSDL 507
Query: 575 EDXXXXXXXXXXXXKDEFNTAAKEHKDLKANWDKEKTDLHKQIADLXDKL 724
+ A E +D+ + E+ DL + IA++ +L
Sbjct: 508 RTEVEAKTKKLKKMLIKLRQARNEIRDVSGAYSDERQDLDQTIAEVSKEL 557
>U41995-1|AAA83459.1| 301|Caenorhabditis elegans Serpentine
receptor, class x protein47 protein.
Length = 301
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -2
Query: 610 LFSPTYQLQPIFHITDSSFISLVLFYKR-CLLFFKQYLHLFTYSMLVVYSRF*FGYLCFC 434
L+S + + +F +F S+++ Y C F+ LH+F Y + F F Y FC
Sbjct: 114 LYSQRFTIGMLFTANMYAFASIIVLYTSGCRYFWSSELHMFMYHVSNSCVNFSF-YGIFC 172
>AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein.
Length = 782
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Frame = +2
Query: 425 LIAAKAQITKLESRVNHQHT-IRKEMQILFEE-----EKASLIEQHKRD----ERAVSDM 574
LI + +LESR QH + K+ + L E+ E +E+ + D ++ SD+
Sbjct: 448 LIVGSEEDGRLESRTKEQHAQLEKKRRELAEQKRREREMVEALERQEEDTVDLKQTFSDL 507
Query: 575 EDXXXXXXXXXXXXKDEFNTAAKEHKDLKANWDKEKTDLHKQIADLXDKL 724
+ A E +D+ + E+ DL + IA++ +L
Sbjct: 508 RTEVEAKTKKLKKMLIKLRQARNEIRDVSGAYSDERQDLDQTIAEVSKEL 557
>AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like
protein (klp-11) protein.
Length = 607
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Frame = +2
Query: 425 LIAAKAQITKLESRVNHQHT-IRKEMQILFEE-----EKASLIEQHKRD----ERAVSDM 574
LI + +LESR QH + K+ + L E+ E +E+ + D ++ SD+
Sbjct: 397 LIVGSEEDGRLESRTKEQHAQLEKKRRELAEQKRREREMVEALERQEEDTVDLKQTFSDL 456
Query: 575 EDXXXXXXXXXXXXKDEFNTAAKEHKDLKANWDKEKTDLHKQIADLXDKL 724
+ A E +D+ + E+ DL + IA++ +L
Sbjct: 457 RTEVEAKTKKLKKMLIKLRQARNEIRDVSGAYSDERQDLDQTIAEVSKEL 506
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,330,881
Number of Sequences: 27780
Number of extensions: 268275
Number of successful extensions: 1308
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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