Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_I16
         (883 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    27   0.76 
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    25   2.3  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    25   2.3  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    25   2.3  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   3.1  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   5.3  

>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 27.1 bits (57), Expect = 0.76
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +1

Query: 214 VEKAERFLLKAERLYPTTRAKELLTRVR 297
           V K  RF+L+  R  PTTR K  L  VR
Sbjct: 53  VSKEPRFILRVLRSLPTTRRKLALVVVR 80


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 451 KDYYEILGVTKEATDSDIKKAYKKLALQLHPDKNRAPGAAE 573
           KD + ++ V K  T+ +++  +  +A+   P     PGAAE
Sbjct: 162 KDDHTVVAVMKNQTERELRAKHVVIAVGGRPRYPDIPGAAE 202


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 451 KDYYEILGVTKEATDSDIKKAYKKLALQLHPDKNRAPGAAE 573
           KD + ++ V K  T+ +++  +  +A+   P     PGAAE
Sbjct: 138 KDDHTVVAVMKNQTERELRAKHVVIAVGGRPRYPDIPGAAE 178


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 451 KDYYEILGVTKEATDSDIKKAYKKLALQLHPDKNRAPGAAE 573
           KD + ++ V K  T+ +++  +  +A+   P     PGAAE
Sbjct: 135 KDDHTVVAVMKNQTERELRAKHVVIAVGGRPRYPDIPGAAE 175


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 349 NDDLRKRKTPTHQPQHREYTTEQLEAVRRIKTK 447
           NDD    +   ++P HR++ ++QLEAV+ +  K
Sbjct: 83  NDDYSFLQIEKNEP-HRDFDSQQLEAVQIMPQK 114


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
 Frame = +1

Query: 514 YKKLALQLHPDKNRAPGAAEAFKAI---GNAAAILTDPEKRKQYDIRGDEPAPATHTHQY 684
           +KK  L L P   + PG A +F+ I    N   +       +  D+  D  +P    +QY
Sbjct: 475 WKKQKLALIPKPGKPPGLASSFRPILLLNNPGKVYERLLLSRINDVIEDPESPRLAENQY 534

Query: 685 YARGFESDFTAEEL 726
             R   S   A +L
Sbjct: 535 GFRRGRSTVQAIQL 548


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,668
Number of Sequences: 2352
Number of extensions: 12069
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)