Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_I14
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical p... 46 3e-05
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 40 0.003
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 38 0.006
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical pr... 37 0.019
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 35 0.077
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 35 0.077
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 35 0.077
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 34 0.10
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 34 0.13
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 34 0.13
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 34 0.13
AF491488-1|AAM09770.1| 88|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491487-1|AAM09769.1| 88|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491486-1|AAM09768.1| 88|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491485-1|AAM09767.1| 88|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491484-1|AAM09766.1| 82|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491483-1|AAM09765.1| 88|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491482-1|AAM09764.1| 88|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491481-1|AAM09763.1| 88|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491480-1|AAM09762.1| 87|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491479-1|AAM09761.1| 88|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491478-1|AAM09760.1| 88|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491477-1|AAM09759.1| 88|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491476-1|AAM09758.1| 88|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491475-1|AAM09757.1| 88|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491474-1|AAM09756.1| 88|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491473-1|AAM09755.1| 88|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491472-1|AAM09754.1| 88|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491471-1|AAM09753.1| 86|Caenorhabditis elegans GLP-1 protein. 33 0.18
AF491470-1|AAM09752.1| 88|Caenorhabditis elegans GLP-1 protein. 33 0.18
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical pr... 33 0.23
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 33 0.23
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 33 0.23
AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein. 33 0.23
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 32 0.41
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 31 0.94
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 31 0.94
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 31 0.94
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 31 0.94
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 31 0.94
Z78064-10|CAB01510.3| 299|Caenorhabditis elegans Hypothetical p... 30 2.2
Z68316-2|CAA92681.1| 352|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z93374-3|CAB07558.2| 363|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL110479-5|CAB60314.2| 397|Caenorhabditis elegans Hypothetical ... 29 2.9
AF273815-1|AAG15164.1| 365|Caenorhabditis elegans nuclear recep... 29 2.9
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 29 3.8
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 29 3.8
AL024499-6|CAA19709.1| 326|Caenorhabditis elegans Hypothetical ... 29 3.8
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z49889-6|CAA90069.2| 435|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z49887-7|CAA90060.2| 435|Caenorhabditis elegans Hypothetical pr... 28 6.7
AC024826-11|AAF60802.1| 246|Caenorhabditis elegans Hypothetical... 28 6.7
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 8.8
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 8.8
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 28 8.8
>Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical
protein Y69H2.11 protein.
Length = 887
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/81 (29%), Positives = 41/81 (50%)
Frame = +2
Query: 236 CEPNQAQNGCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIRGICTQT 415
C + Q C + + + GY C + ++ T R+C N + E C+ +PC+ G C
Sbjct: 260 CSADLGQGLCINWQSDFTDGYACICKPLW-TGRNCENPVPEA----CTPSPCLNGTCVLN 314
Query: 416 IQDPGFTCKCEGTGYYGKRCE 478
Q FTC C+ G++G +C+
Sbjct: 315 DQYNKFTCVCD-DGFFGDKCQ 334
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 365 SNICSRTPCI-RGICTQTIQDPGFTCKCEGTGYYGKRCERI 484
S+IC+ C+ G CT+ + + + C C Y+GK CE I
Sbjct: 336 SDICTSATCLYGGTCTE-LNNGDYKCDCL-LQYFGKNCEVI 374
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +2
Query: 236 CEPNQAQNGCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIRGICTQT 415
C N Q C + + GY C ++ T C + ++ C+ +PC GIC
Sbjct: 322 CNANLGQGICINLSSDVTNGYQCICGPLW-TDTDCETPV----ASACTPSPCWNGICVLN 376
Query: 416 IQDPGFTCKCEGTGYYGKRCE 478
Q +TC C+ GY+G C+
Sbjct: 377 EQYNTYTCACD-DGYFGDLCQ 396
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 368 NICSRTPCI-RGICTQTIQDPGFTCKCEGTGYYGKRCERI 484
++C+ + C+ G CT+T G+TC C + Y+G CE I
Sbjct: 399 DVCTSSTCLYGGTCTET-SSGGYTCSCL-SQYFGTNCEEI 436
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 356 ERSSNICSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCERI 484
+R N C+ C RG C T+ P C+CE GY G+ CE++
Sbjct: 1328 QRDVNECNHYDCNRGHCVMTVSGP--ACQCE-MGYTGRFCEKL 1367
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 362 SSNICSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCERI 484
S +CS + C G C++T D FTC+C G GK C+++
Sbjct: 943 SDPMCSSSTCKHGECSETFND--FTCRC-SDGSTGKLCDKV 980
Score = 31.5 bits (68), Expect = 0.71
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 374 CSRTPCIRGI-CTQTIQDPGFTCKCEGTGYYGKRCERICPATAIPGTFFPHEC 529
C+ C G C I D + C C+GTG+ G+ C A P EC
Sbjct: 1523 CALEFCKNGAKCRDKIND--YECVCDGTGFEGRNCTTDINECANPNNCINGEC 1573
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 362 SSNICSRTPCIR-GICTQTIQDPGFTCKCEGTGYYGKRCERICPATAIP 505
+SN+C C+ G C T D + C+CE G+ GK CE+ P P
Sbjct: 343 ASNVCQNHNCVNAGKCKPT-SDTEYKCECE-AGFLGKFCEKTSPCQTNP 389
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +2
Query: 221 LGVWACEPNQAQNGCKIYGNSCSCGYGCKTEYI---YRTRRSCLNALRERSSNICSRTPC 391
+ + AC+PN+ N G +C +G K + + T +C + E S + C
Sbjct: 72 IAINACDPNKCSN-----GGTCIPSFGAKFTCLCPPHFTGTTCEADIDECSVYNGTTAGC 126
Query: 392 -IRGICTQTIQDPGFTCKCEGTGYYGKRCE 478
G C GF C+C+ +GY+G C+
Sbjct: 127 QNNGTCIN--NRGGFECQCQ-SGYHGSLCQ 153
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 362 SSNICSRTPCIR-GICTQTIQDPGFTCKCEGTGYYGKRCERICPATAIP 505
+SN+C C+ G C T D + C+CE G+ GK CE+ P P
Sbjct: 343 ASNVCQNHNCVNAGKCKPT-SDTEYKCECE-AGFLGKFCEKTSPCQTNP 389
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +2
Query: 221 LGVWACEPNQAQNGCKIYGNSCSCGYGCKTEYI---YRTRRSCLNALRERSSNICSRTPC 391
+ + AC+PN+ N G +C +G K + + T +C + E S + C
Sbjct: 72 IAINACDPNKCSN-----GGTCIPSFGAKFTCLCPPHFTGTTCEADIDECSVYNGTTAGC 126
Query: 392 -IRGICTQTIQDPGFTCKCEGTGYYGKRCE 478
G C GF C+C+ +GY+G C+
Sbjct: 127 QNNGTCIN--NRGGFECQCQ-SGYHGSLCQ 153
>Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical
protein Y69H2.2 protein.
Length = 907
Score = 36.7 bits (81), Expect = 0.019
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Frame = +2
Query: 233 ACEPNQAQNGCKIYGNSC-------SCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPC 391
ACE N G ++ C + G+ C E ++ T C N + ++ C+ PC
Sbjct: 298 ACEDNSTLCGAELGHGMCINWQSDVTDGFACICEPLW-TGPDCENPV----ASACTPNPC 352
Query: 392 IRGICTQTIQDPGFTCKCEGTGYYGKRCERICPATA 499
+ G C Q + C C+ G+ G CE TA
Sbjct: 353 VNGTCVLNEQYNKYKCDCD-DGFSGDNCEYSKTCTA 387
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical
protein C29A12.4 protein.
Length = 1560
Score = 34.7 bits (76), Expect = 0.077
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 3/97 (3%)
Frame = +2
Query: 227 VWACEPNQAQNGC--KIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIR- 397
VW+ + GC I N S G + E T L +IC PC
Sbjct: 606 VWSIALQKGYTGCIKNIRMNGVSTKIGQEFEASNSTGIE-LGCSLSNELDICEPNPCQNF 664
Query: 398 GICTQTIQDPGFTCKCEGTGYYGKRCERICPATAIPG 508
G C++ + F C C T + GK+CE A + G
Sbjct: 665 GKCSKNLNS--FDCDCSNTNFEGKQCELEQTAVEVNG 699
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
F40E10.4 protein.
Length = 1410
Score = 34.7 bits (76), Expect = 0.077
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +2
Query: 236 CEPNQAQNG--CK--IYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIRGI 403
C+ + QNG C I C C G +Y + + + ++ C ++ C +G
Sbjct: 1029 CKNVECQNGGSCVDGILSYDCLCRPGYAGQYC---EIPPMMDMEYQKTDACQQSACGQGE 1085
Query: 404 CTQTIQDPGFTCKCEGTGYYGKRCER 481
C + FTCKC G+ G C+R
Sbjct: 1086 CVASQNSSDFTCKCH-EGFSGPSCDR 1110
Score = 32.3 bits (70), Expect = 0.41
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 368 NICSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCE 478
++C +PC +T +TC C G+YG CE
Sbjct: 871 DLCLNSPCKNNAICETTSSRKYTCNCT-PGFYGVHCE 906
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +2
Query: 239 EPNQAQ-NGCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIRGICTQT 415
EP+ A+ ++ N +C C+ ++ R L ++ +C+ ++G +
Sbjct: 181 EPSNARFRQLDLFNNPWNCD--CRLRWM----RKWLEKAEGQNKTVCATPLNLQGSSIEI 234
Query: 416 IQDPGFTCKCEGTGYYGKRCE--RICP 490
+QD TC Y K CE ICP
Sbjct: 235 LQDKFMTCSGNRKRRYKKTCETAEICP 261
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +2
Query: 356 ERSSNICSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER 481
E + C +PC+ + Q F C C G+ G CE+
Sbjct: 906 ENQIDACYGSPCLNNATCKVAQAGRFNCYC-NKGFEGDYCEK 946
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 34.7 bits (76), Expect = 0.077
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +2
Query: 236 CEPNQAQNG--CK--IYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIRGI 403
C+ + QNG C I C C G +Y + + + ++ C ++ C +G
Sbjct: 1029 CKNVECQNGGSCVDGILSYDCLCRPGYAGQYC---EIPPMMDMEYQKTDACQQSACGQGE 1085
Query: 404 CTQTIQDPGFTCKCEGTGYYGKRCER 481
C + FTCKC G+ G C+R
Sbjct: 1086 CVASQNSSDFTCKCH-EGFSGPSCDR 1110
Score = 32.3 bits (70), Expect = 0.41
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 368 NICSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCE 478
++C +PC +T +TC C G+YG CE
Sbjct: 871 DLCLNSPCKNNAICETTSSRKYTCNCT-PGFYGVHCE 906
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +2
Query: 239 EPNQAQ-NGCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIRGICTQT 415
EP+ A+ ++ N +C C+ ++ R L ++ +C+ ++G +
Sbjct: 181 EPSNARFRQLDLFNNPWNCD--CRLRWM----RKWLEKAEGQNKTVCATPLNLQGSSIEI 234
Query: 416 IQDPGFTCKCEGTGYYGKRCE--RICP 490
+QD TC Y K CE ICP
Sbjct: 235 LQDKFMTCSGNRKRRYKKTCETAEICP 261
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +2
Query: 356 ERSSNICSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER 481
E + C +PC+ + Q F C C G+ G CE+
Sbjct: 906 ENQIDACYGSPCLNNATCKVAQAGRFNCYC-NKGFEGDYCEK 946
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 34.3 bits (75), Expect = 0.10
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
Frame = +2
Query: 236 CEPNQAQNGCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIR-GICTQ 412
C+ + N C+ SC C + + R R + + C + PC G C
Sbjct: 721 CDCHNHSNSCEAESGSCICEHNTAGDTCERCARGYYGDALQGTEEDCQKCPCPNDGPCIL 780
Query: 413 TIQDPGFTCKCEGTGYYGKRCE 478
+C GY G+RC+
Sbjct: 781 HADGDVICTECP-NGYTGRRCD 801
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 NGCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNI--CSRTPCIRGICTQTIQDPG 430
NG C G+ C E Y R +N + +I C PC+ +++ G
Sbjct: 333 NGTCYNDGRCINGF-CVCEPDYIGDRCEINRKDFKFPDIQSCKYNPCVNNATCIDLKNSG 391
Query: 431 FTCKCEGTGYYGKRCER--IC-PATAIPG 508
++C C G+YG CE+ +C P T G
Sbjct: 392 YSCHCP-LGFYGLNCEQHLLCTPTTCANG 419
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 NGCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNI--CSRTPCIRGICTQTIQDPG 430
NG C G+ C E Y R +N + +I C PC+ +++ G
Sbjct: 333 NGTCYNDGRCINGF-CVCEPDYIGDRCEINRKDFKFPDIQSCKYNPCVNNATCIDLKNSG 391
Query: 431 FTCKCEGTGYYGKRCER--IC-PATAIPG 508
++C C G+YG CE+ +C P T G
Sbjct: 392 YSCHCP-LGFYGLNCEQHLLCTPTTCANG 419
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical
protein R107.8 protein.
Length = 1429
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 368 NICSRTPCIR-GICTQTIQDPGFTCKCEGTGYYGKRCERICP 490
N+C C G C T D C+C+ G+ GKRCE+ CP
Sbjct: 406 NMCQDFHCENDGTCMHT-SDHSPVCQCKN-GFIGKRCEKECP 445
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCE 478
C+ PC G+C GF C C+ GY G C+
Sbjct: 254 CASNPCSHGVCISF--SGGFQCICD-DGYSGSYCQ 285
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 NGCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNI--CSRTPCIRGICTQTIQDPG 430
NG C G+ C E Y R +N + +I C PC+ +++ G
Sbjct: 333 NGTCYNDGRCINGF-CVCEPDYIGDRCEINRKDFKFPDIQSCKYNPCVNNATCIDLKNSG 391
Query: 431 FTCKCEGTGYYGKRCER--IC-PATAIPG 508
++C C G+YG CE+ +C P T G
Sbjct: 392 YSCHCP-LGFYGLNCEQHLLCTPTTCANG 419
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein (
C.elegans homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 368 NICSRTPCIR-GICTQTIQDPGFTCKCEGTGYYGKRCERICP 490
N+C C G C T D C+C+ G+ GKRCE+ CP
Sbjct: 406 NMCQDFHCENDGTCMHT-SDHSPVCQCKN-GFIGKRCEKECP 445
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCE 478
C+ PC G+C GF C C+ GY G C+
Sbjct: 254 CASNPCSHGVCISF--SGGFQCICD-DGYSGSYCQ 285
>AF491488-1|AAM09770.1| 88|Caenorhabditis elegans GLP-1 protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 38 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 84
>AF491487-1|AAM09769.1| 88|Caenorhabditis elegans GLP-1 protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 38 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 84
>AF491486-1|AAM09768.1| 88|Caenorhabditis elegans GLP-1 protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 38 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 84
>AF491485-1|AAM09767.1| 88|Caenorhabditis elegans GLP-1 protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 38 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 84
>AF491484-1|AAM09766.1| 82|Caenorhabditis elegans GLP-1 protein.
Length = 82
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 32 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 78
>AF491483-1|AAM09765.1| 88|Caenorhabditis elegans GLP-1 protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 38 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 84
>AF491482-1|AAM09764.1| 88|Caenorhabditis elegans GLP-1 protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 38 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 84
>AF491481-1|AAM09763.1| 88|Caenorhabditis elegans GLP-1 protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 38 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 84
>AF491480-1|AAM09762.1| 87|Caenorhabditis elegans GLP-1 protein.
Length = 87
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 37 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 83
>AF491479-1|AAM09761.1| 88|Caenorhabditis elegans GLP-1 protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 38 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 84
>AF491478-1|AAM09760.1| 88|Caenorhabditis elegans GLP-1 protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 38 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 84
>AF491477-1|AAM09759.1| 88|Caenorhabditis elegans GLP-1 protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 38 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 84
>AF491476-1|AAM09758.1| 88|Caenorhabditis elegans GLP-1 protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 38 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 84
>AF491475-1|AAM09757.1| 88|Caenorhabditis elegans GLP-1 protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 38 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 84
>AF491474-1|AAM09756.1| 88|Caenorhabditis elegans GLP-1 protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 38 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 84
>AF491473-1|AAM09755.1| 88|Caenorhabditis elegans GLP-1 protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 38 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 84
>AF491472-1|AAM09754.1| 88|Caenorhabditis elegans GLP-1 protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 38 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 84
>AF491471-1|AAM09753.1| 86|Caenorhabditis elegans GLP-1 protein.
Length = 86
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 36 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 82
>AF491470-1|AAM09752.1| 88|Caenorhabditis elegans GLP-1 protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER--IC-PATAIPG 508
C PC+ +++ G++C C G+YG CE+ +C P T G
Sbjct: 38 CKYNPCVNNATCIDLKNSGYSCHCP-LGFYGLNCEQHLLCTPTTCANG 84
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 359 RSSNICSRTPCIR-GICTQTIQDPGFTCKCEGTGYYGKRCE 478
R+ C + C G+C T +PGF C+C G G RC+
Sbjct: 2245 RAPPACQHSLCHNDGVCHNT--NPGFFCECRNDGLKGARCQ 2283
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 359 RSSNICSRTPCIR-GICTQTIQDPGFTCKCEGTGYYGKRCE 478
R+ C + C G+C T +PGF C+C G G RC+
Sbjct: 2245 RAPPACQHSLCHNDGVCHNT--NPGFFCECRNDGLKGARCQ 2283
>Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical
protein W02B9.1a protein.
Length = 1223
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 359 RSSNICSRTPCIR-GICTQTIQDPGFTCKCEGTGYYGKRCE 478
R+ C + C G+C T +PGF C+C G G RC+
Sbjct: 548 RAPPACQHSLCHNDGVCHNT--NPGFFCECRNDGLKGARCQ 586
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 359 RSSNICSRTPCIR-GICTQTIQDPGFTCKCEGTGYYGKRCE 478
R+ C + C G+C T +PGF C+C G G RC+
Sbjct: 2245 RAPPACQHSLCHNDGVCHNT--NPGFFCECRNDGLKGARCQ 2283
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 359 RSSNICSRTPCIR-GICTQTIQDPGFTCKCEGTGYYGKRCE 478
R+ C + C G+C T +PGF C+C G G RC+
Sbjct: 2245 RAPPACQHSLCHNDGVCHNT--NPGFFCECRNDGLKGARCQ 2283
>AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein.
Length = 1223
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 359 RSSNICSRTPCIR-GICTQTIQDPGFTCKCEGTGYYGKRCE 478
R+ C + C G+C T +PGF C+C G G RC+
Sbjct: 548 RAPPACQHSLCHNDGVCHNT--NPGFFCECRNDGLKGARCQ 586
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
protein T01D3.7 protein.
Length = 2882
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 374 CSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCE-RICPATAIPG 508
CS T CI CT CKCE G+ G RC+ +C + ++ G
Sbjct: 854 CSVTSCIDSQCTHGHCGTNGLCKCE-DGWQGSRCQIPLCNSCSLNG 898
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 31.5 bits (68), Expect = 0.71
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 368 NICSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCER 481
N+C+ +PC+ G+C + C C+ G+ G+ C++
Sbjct: 67 NLCASSPCVHGLCIDKLYSR--QCLCQ-PGWTGENCDQ 101
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 31.1 bits (67), Expect = 0.94
Identities = 25/100 (25%), Positives = 36/100 (36%), Gaps = 5/100 (5%)
Frame = +2
Query: 212 CFQLGV-WACEPNQAQNGCKIYGNSCSCGYGCKTEYIYRTRRSC----LNALRERSSNIC 376
C+ G + C P QA Y + SCG Y T R+C N S+N
Sbjct: 502 CYYDGTTYGCCPTQAYTCSLSYKSGASCGPAVTRWYYDSTTRTCQTYSFNGCDGNSNNFA 561
Query: 377 SRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCERICPAT 496
++ C ++ D G K + R CP+T
Sbjct: 562 TQQDCKDYCRVESCPDGGEVWKEQNGAARACTTNRQCPST 601
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 31.1 bits (67), Expect = 0.94
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +2
Query: 239 EPNQAQNGCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRT-PCIRGICTQT 415
E + + C C C G K R C +A E+ CS+T C+R
Sbjct: 340 EFSDSNASCDAKTGQCQCESGYKGPKC--DERKC-DA--EQYGADCSKTCTCVRENTLMC 394
Query: 416 IQDPGFTCKCEGTGYYGKRCERIC 487
+ GF C+C+ G+YG CE C
Sbjct: 395 APNTGF-CRCK-PGFYGDNCELAC 416
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 31.1 bits (67), Expect = 0.94
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +2
Query: 239 EPNQAQNGCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRT-PCIRGICTQT 415
E + + C C C G K R C +A E+ CS+T C+R
Sbjct: 340 EFSDSNASCDAKTGQCQCESGYKGPKC--DERKC-DA--EQYGADCSKTCTCVRENTLMC 394
Query: 416 IQDPGFTCKCEGTGYYGKRCERIC 487
+ GF C+C+ G+YG CE C
Sbjct: 395 APNTGF-CRCK-PGFYGDNCELAC 416
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 31.1 bits (67), Expect = 0.94
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +2
Query: 239 EPNQAQNGCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRT-PCIRGICTQT 415
E + + C C C G K R C +A E+ CS+T C+R
Sbjct: 340 EFSDSNASCDAKTGQCQCESGYKGPKC--DERKC-DA--EQYGADCSKTCTCVRENTLMC 394
Query: 416 IQDPGFTCKCEGTGYYGKRCERIC 487
+ GF C+C+ G+YG CE C
Sbjct: 395 APNTGF-CRCK-PGFYGDNCELAC 416
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 31.1 bits (67), Expect = 0.94
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +2
Query: 239 EPNQAQNGCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRT-PCIRGICTQT 415
E + + C C C G K R C +A E+ CS+T C+R
Sbjct: 340 EFSDSNASCDAKTGQCQCESGYKGPKC--DERKC-DA--EQYGADCSKTCTCVRENTLMC 394
Query: 416 IQDPGFTCKCEGTGYYGKRCERIC 487
+ GF C+C+ G+YG CE C
Sbjct: 395 APNTGF-CRCK-PGFYGDNCELAC 416
>Z78064-10|CAB01510.3| 299|Caenorhabditis elegans Hypothetical
protein F57B1.1 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = -2
Query: 790 NLLFI*NVSFLFIESKSYFLHT*LCFAK---LCWVQQISINSKYYYIAY-NTQCQYEYYK 623
NL+ + F+F K HT + F K W+ + + S + ++ CQYEY +
Sbjct: 88 NLIIAIHRMFVFFFKK----HTDIAFEKPITYFWMGMVWVLSAFVVVSMIMNNCQYEYDE 143
Query: 622 NIVMKNYFI 596
I+MK+Y +
Sbjct: 144 RILMKHYVL 152
>Z68316-2|CAA92681.1| 352|Caenorhabditis elegans Hypothetical
protein K08E4.3 protein.
Length = 352
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = +2
Query: 185 ILGILAAVACFQLGVWACEPNQAQNGCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERS 364
+ G++ A + + P ++ GC+ +G + C + C ++Y Y R +
Sbjct: 175 VTGMIGMTAKTVAELTSFNPRLSEGGCEWFGTAPLCNFPCPSDYDY-IRANNGRCSSWWL 233
Query: 365 SNICSRTPCIRGICTQTIQD---PGFTCKCE 448
S CS P C+ + D F CK +
Sbjct: 234 SGFCSPDPSFGKPCSTILGDYFSKRFCCKSD 264
>Z93374-3|CAB07558.2| 363|Caenorhabditis elegans Hypothetical
protein C06C6.4 protein.
Length = 363
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = -1
Query: 425 DPGLSACICHECKAYESICLNFSLLVHSNKNVLSYKCTQFYNRNHNCTSYRI 270
+P C C A+ F HS K+V+S C Y +H C RI
Sbjct: 15 EPHFGGVSCRACAAF------FRRYFHSKKSVISCTCQIRYQNSHPCRECRI 60
>AL110479-5|CAB60314.2| 397|Caenorhabditis elegans Hypothetical
protein Y105C5B.7 protein.
Length = 397
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 700 WVQQISINSKYYYIAYNTQCQYEY 629
W++ I+INS+YY A +T+ Q +Y
Sbjct: 208 WIRFIAINSEYYAEAMSTETQAQY 231
>AF273815-1|AAG15164.1| 365|Caenorhabditis elegans nuclear receptor
NHR-63 protein.
Length = 365
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = -1
Query: 425 DPGLSACICHECKAYESICLNFSLLVHSNKNVLSYKCTQFYNRNHNCTSYRI 270
+P C C A+ F HS K+V+S C Y +H C RI
Sbjct: 17 EPHFGGVSCRACAAF------FRRYFHSKKSVISCTCQIRYQNSHPCRECRI 62
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/53 (24%), Positives = 21/53 (39%)
Frame = +2
Query: 329 RRSCLNALRERSSNICSRTPCIRGICTQTIQDPGFTCKCEGTGYYGKRCERIC 487
RR +R ++N ++ C+ T+T+ D CK Y IC
Sbjct: 265 RRFLYKGIRGNANNFVTKAQCVDACETETVTDEANPCKFSNAAKYKNGSRIIC 317
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +2
Query: 338 CLNALRERSSNICSRTPCIRGICTQTIQDPGFT-CKCEGTGYYGKRCERICP-ATAIPGT 511
C + N+ R C G C DP F C C G YG+ CE+ CP T
Sbjct: 664 CPDGFYGSQCNLKCRMDCPNGRC-----DPVFGYCTCPD-GLYGQSCEKPCPHFTFGKNC 717
Query: 512 FFPHEC 529
FP +C
Sbjct: 718 RFPCKC 723
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Frame = +2
Query: 260 GCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIRGI-CTQTIQDPGFT 436
GC C C G Y + +R C L + + C GI C D T
Sbjct: 730 GCDEITGKCRCKPGY---YGHHCKRMCSPGLF--GAGCAMKCSCPAGIRCDPVTGD--CT 782
Query: 437 CKCEGTGYYGKRCERICPA 493
KC GY G C++ CPA
Sbjct: 783 KKCPA-GYQGNLCDQPCPA 800
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +2
Query: 338 CLNALRERSSNICSRTPCIRGICTQTIQDPGFT-CKCEGTGYYGKRCERICP-ATAIPGT 511
C + N+ R C G C DP F C C G YG+ CE+ CP T
Sbjct: 664 CPDGFYGSQCNLKCRMDCPNGRC-----DPVFGYCTCPD-GLYGQSCEKPCPHFTFGKNC 717
Query: 512 FFPHEC 529
FP +C
Sbjct: 718 RFPCKC 723
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Frame = +2
Query: 260 GCKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIRGI-CTQTIQDPGFT 436
GC C C G Y + +R C L + + C GI C D T
Sbjct: 730 GCDEITGKCRCKPGY---YGHHCKRMCSPGLF--GAGCAMKCSCPAGIRCDPVTGD--CT 782
Query: 437 CKCEGTGYYGKRCERICPA 493
KC GY G C++ CPA
Sbjct: 783 KKCPA-GYQGNLCDQPCPA 800
>AL024499-6|CAA19709.1| 326|Caenorhabditis elegans Hypothetical
protein H38K22.3 protein.
Length = 326
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -1
Query: 302 NRNHNCTSYRIFCTHS----EPDWAHTPKRPIESRRQQLRCRGYACF*LHGPG 156
N +N R++C+ E WA P++ IE ++ RC AC GPG
Sbjct: 239 NSEYNQNGGRVWCSTKSGGVERQWAGVPRKLIEPTTEKFRC---ACVKNFGPG 288
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 28.7 bits (61), Expect = 5.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 428 GFTCKCEGTGYYGKRCE 478
G C C GT + G+RCE
Sbjct: 2026 GAACDCSGTNFIGRRCE 2042
>Z49889-6|CAA90069.2| 435|Caenorhabditis elegans Hypothetical
protein T06H11.4 protein.
Length = 435
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 54 KNKYAYEFRDNTTVGLQRYVGRSLIGNAYQSSIK-PRAVQLET 179
K+ YA D +GL++ VG SL GN YQ +++ + V++ T
Sbjct: 66 KDGYAVIAHDG--IGLKKMVGVSLAGNIYQGAVEIGKCVRIST 106
>Z49887-7|CAA90060.2| 435|Caenorhabditis elegans Hypothetical
protein T06H11.4 protein.
Length = 435
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 54 KNKYAYEFRDNTTVGLQRYVGRSLIGNAYQSSIK-PRAVQLET 179
K+ YA D +GL++ VG SL GN YQ +++ + V++ T
Sbjct: 66 KDGYAVIAHDG--IGLKKMVGVSLAGNIYQGAVEIGKCVRIST 106
>AC024826-11|AAF60802.1| 246|Caenorhabditis elegans Hypothetical
protein Y55F3AM.10 protein.
Length = 246
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 431 IRDPGLSACICHECKAYESICLNFSLLVHS 342
I D G AC H K +E++C+NF L+ S
Sbjct: 215 IPDAG-HACYLHNPKCFENLCVNFFDLIRS 243
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical
protein F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.8
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = +2
Query: 236 CEPNQAQNGC--KIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIRGICT 409
C Q GC +G C+C G K + R R+C + N C+ +C
Sbjct: 302 CPSLGCQAGCHPSPHGGECTCPSGYKLDD--RFHRTCSDI------NECAEFGYCDQLCA 353
Query: 410 QTIQDPGFTCKCEG 451
PGFTC C G
Sbjct: 354 N--HRPGFTCSCLG 365
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL
receptor-related protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 8.8
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = +2
Query: 236 CEPNQAQNGC--KIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIRGICT 409
C Q GC +G C+C G K + R R+C + N C+ +C
Sbjct: 302 CPSLGCQAGCHPSPHGGECTCPSGYKLDD--RFHRTCSDI------NECAEFGYCDQLCA 353
Query: 410 QTIQDPGFTCKCEG 451
PGFTC C G
Sbjct: 354 N--HRPGFTCSCLG 365
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/87 (21%), Positives = 29/87 (33%), Gaps = 2/87 (2%)
Frame = +2
Query: 236 CEPNQAQNG-CKIYGNSCSCGYGCKTEYIYRTRRSCLNALRERSSNICSRTPCIR-GICT 409
C+ + +G C + G C C K + R C + C + C G
Sbjct: 799 CDATGSVSGICNVQGGQCEC----KPNVVGRRCDQCAIGTYGFGPSGCKKCDCDAVGSLG 854
Query: 410 QTIQDPGFTCKCEGTGYYGKRCERICP 490
C C G YG++C + P
Sbjct: 855 NDCDKQSGQCVCREKGIYGRQCNQCQP 881
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,882,127
Number of Sequences: 27780
Number of extensions: 403770
Number of successful extensions: 1183
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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