Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_I14
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     24   1.9  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   7.5  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   7.5  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   7.5  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   7.5  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   7.5  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    21   9.9  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    21   9.9  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    21   9.9  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    21   9.9  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 785 IIYLKCFIFIHRIKILFFTYLIVFRKV 705
           II  K   F+  I +LF  + + FRK+
Sbjct: 221 IILKKTVCFVIPIMLLFLAFFVSFRKI 247


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 365 NFSLLVHSNKNVLSYKCTQFYNRNH 291
           N++   ++N N  +YK  Q+YN N+
Sbjct: 93  NYNNYNNNNYNNNNYKKLQYYNINY 117


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 365 NFSLLVHSNKNVLSYKCTQFYNRNH 291
           N++   ++N N  +YK  Q+YN N+
Sbjct: 93  NYNNYNNNNYNNNNYKKLQYYNINY 117


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 365 NFSLLVHSNKNVLSYKCTQFYNRNH 291
           N++   ++N N  +YK  Q+YN N+
Sbjct: 93  NYNNYNNNNYNNNNYKKLQYYNINY 117


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 365 NFSLLVHSNKNVLSYKCTQFYNRNH 291
           N++   ++N N  +YK  Q+YN N+
Sbjct: 93  NYNNYNNNNYNNNNYKKLQYYNINY 117


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
 Frame = -2

Query: 697 VQQISINSKYY----YIAYNTQCQYEYYKNIVMKNYFI 596
           +  +S N KY     Y  YN      Y K +  KNY I
Sbjct: 315 ISSLSNNYKYSNYNNYNNYNNNNYNNYNKKLYYKNYII 352


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 350 VHSNKNVLSYKCTQFYNRNH 291
           +H+N N   YK  Q+YN N+
Sbjct: 312 IHNNNN---YKKLQYYNINY 328


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 350 VHSNKNVLSYKCTQFYNRNH 291
           +H+N N   YK  Q+YN N+
Sbjct: 323 IHNNNN---YKKLQYYNINY 339


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 350 VHSNKNVLSYKCTQFYNRNH 291
           +H+N N   YK  Q+YN N+
Sbjct: 323 IHNNNN---YKKLQYYNINY 339


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 350 VHSNKNVLSYKCTQFYNRNH 291
           +H+N N   YK  Q+YN N+
Sbjct: 312 IHNNNN---YKKLQYYNINY 328


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,070
Number of Sequences: 438
Number of extensions: 5413
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)