Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_I12
         (546 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    26   0.29 
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    24   1.2  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    22   4.7  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    22   4.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.2  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   8.2  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 25   YWHLRRSYIKARPRFGLATVDLFFCSTYNNMIL 123
            +WH R + IK RP      V LFF     N+ L
Sbjct: 983  FWHHRLAEIKRRPDLEYGKVWLFFGCRQRNLDL 1015



 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 354 FSLKLIHRALLAHMKLKILFPHSTVTNSM 440
           F+ KL  RAL   +K  +LF   T T+ M
Sbjct: 455 FTSKLFGRALSRRIKATVLFATETGTSQM 483


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +1

Query: 250 KDLAGRNVESCFSLAVKQSK-PAVLNVLGSVT 342
           + L  +N E CFSL  K  K P  L  +  VT
Sbjct: 535 RTLGNQNSEMCFSLKFKNKKLPVFLAEIWDVT 566


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 299 NNPSLLCLMFLAV*RFDLLFAEIN 370
           N PS+ C M+  +  F L+  E N
Sbjct: 66  NEPSITCYMYCLLEAFSLVDDEAN 89


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 299 NNPSLLCLMFLAV*RFDLLFAEIN 370
           N PS+ C M+  +  F L+  E N
Sbjct: 66  NEPSITCYMYCLLEAFSLVDDEAN 89


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 14/62 (22%), Positives = 23/62 (37%)
 Frame = -1

Query: 408 KFLISYELTVLYGLISAKSKSNRYTAKNIKHSRLGLFHRETETRLHITPSQIFASI*VNI 229
           +F   +  TV+Y  +  K+          KHS          ++L I    +F  I +N 
Sbjct: 725 RFAAGFCFTVVYAALLTKTNRISRIFNASKHSAKRPSFISPRSQLIICSGLVFVQILING 784

Query: 228 TW 223
            W
Sbjct: 785 VW 786


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +1

Query: 229 YVHSNRSKDLAGRNVESCFSLAVKQSKPAVLNVLGSVTIR 348
           Y    RSK LAG  + + + LA   + P +L      T R
Sbjct: 146 YSRRRRSKRLAGLMIVAVWVLAGAITSPPLLGCFPRATNR 185


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,627
Number of Sequences: 438
Number of extensions: 2507
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)