Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_I10
         (863 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006762-4|AAU20835.1|  484|Caenorhabditis elegans Hypothetical ...    55   8e-08
AC006762-3|AAU20834.1|  614|Caenorhabditis elegans Hypothetical ...    55   8e-08
AC006762-2|AAF60558.2|  607|Caenorhabditis elegans Hypothetical ...    55   8e-08
AC006762-1|AAU87813.1|  514|Caenorhabditis elegans Hypothetical ...    55   8e-08
Z81570-5|CAB04605.2|  321|Caenorhabditis elegans Hypothetical pr...    31   0.80 
AF078787-4|AAC26952.2|  274|Caenorhabditis elegans Hypothetical ...    30   1.9  
Z74032-2|CAA98466.2|  248|Caenorhabditis elegans Hypothetical pr...    29   5.7  
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical...    29   5.7  
AC006762-8|AAP31426.1|  295|Caenorhabditis elegans Hypothetical ...    28   7.5  
AC006762-7|AAF60555.1|  375|Caenorhabditis elegans Hypothetical ...    28   7.5  

>AC006762-4|AAU20835.1|  484|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4c protein.
          Length = 484

 Score = 54.8 bits (126), Expect = 8e-08
 Identities = 28/66 (42%), Positives = 46/66 (69%)
 Frame = +1

Query: 241 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 420
           VSAPGK+IL GEH+VVYG+TAIA S+ LR+ +    + T  +  +++ LP + +++T  L
Sbjct: 14  VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 70

Query: 421 EPTVKS 438
           +  +K+
Sbjct: 71  KDLLKA 76


>AC006762-3|AAU20834.1|  614|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4b protein.
          Length = 614

 Score = 54.8 bits (126), Expect = 8e-08
 Identities = 28/66 (42%), Positives = 46/66 (69%)
 Frame = +1

Query: 241 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 420
           VSAPGK+IL GEH+VVYG+TAIA S+ LR+ +    + T  +  +++ LP + +++T  L
Sbjct: 144 VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 200

Query: 421 EPTVKS 438
           +  +K+
Sbjct: 201 KDLLKA 206


>AC006762-2|AAF60558.2|  607|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4a protein.
          Length = 607

 Score = 54.8 bits (126), Expect = 8e-08
 Identities = 28/66 (42%), Positives = 46/66 (69%)
 Frame = +1

Query: 241 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 420
           VSAPGK+IL GEH+VVYG+TAIA S+ LR+ +    + T  +  +++ LP + +++T  L
Sbjct: 44  VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 100

Query: 421 EPTVKS 438
           +  +K+
Sbjct: 101 KDLLKA 106


>AC006762-1|AAU87813.1|  514|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4d protein.
          Length = 514

 Score = 54.8 bits (126), Expect = 8e-08
 Identities = 28/66 (42%), Positives = 46/66 (69%)
 Frame = +1

Query: 241 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQETIPL 420
           VSAPGK+IL GEH+VVYG+TAIA S+ LR+ +    + T  +  +++ LP + +++T  L
Sbjct: 44  VSAPGKIILFGEHAVVYGRTAIAGSIDLRTYV---SLYTSADGRIYLSLPDLGVEKTWML 100

Query: 421 EPTVKS 438
           +  +K+
Sbjct: 101 KDLLKA 106


>Z81570-5|CAB04605.2|  321|Caenorhabditis elegans Hypothetical
           protein K12G11.5 protein.
          Length = 321

 Score = 31.5 bits (68), Expect = 0.80
 Identities = 20/49 (40%), Positives = 25/49 (51%)
 Frame = +2

Query: 626 IFGSTYLPVKSMDISMGSELTIGAGTGSSASFAVCLAGALIQLLKLKSS 772
           I+ S YL   SMD+S G  + +GA     A FA  +    I L  LKSS
Sbjct: 163 IYSSQYLMFSSMDVSGGGIVIMGALMFGIALFANLMTFIRISLFYLKSS 211


>AF078787-4|AAC26952.2|  274|Caenorhabditis elegans Hypothetical
           protein T17A3.6 protein.
          Length = 274

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
 Frame = +2

Query: 389 RAWIYRRPFHWSRQSKVCSI----LNWHQGITGKFSWRLPHKIDHDYHLRRVEEYLHLIK 556
           + + ++ P    R   VCSI    L +H+ I  K+S R  +K+  DYH  + +E+  ++ 
Sbjct: 85  KVFYWKPPGFTFRTVHVCSIFMEDLKFHRDILMKYS-RQFNKLTLDYHSLKSQEFHSILS 143

Query: 557 PNFDSLPNNQKNSLRSFL 610
            N+D     +   L   L
Sbjct: 144 LNYDRFCLEKATKLEDLL 161


>Z74032-2|CAA98466.2|  248|Caenorhabditis elegans Hypothetical
           protein F35B12.3 protein.
          Length = 248

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = +2

Query: 710 SASFAVCLAGALIQLLKLKSSSGNFDAYYDQSSQDFTDTEKEIYRNG 850
           S +  V   G L          GN+D  Y Q SQ +  + ++ YR G
Sbjct: 3   SVTLLVVSCGILAAAYPYSQQYGNYDQQYSQQSQYYPSSGQQGYRGG 49


>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
            protein Y75B8A.13 protein.
          Length = 1420

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = -3

Query: 777  PEELFNFNSCINAPARQTAKDAE-LPVPAPMVSSD---PIEISID 655
            PE + +FN    AP  Q ++D E +P   P    D   P+EI+ D
Sbjct: 1179 PESMESFNEASEAPPDQRSEDQEAIPAEEPEEEQDPEEPVEINYD 1223


>AC006762-8|AAP31426.1|  295|Caenorhabditis elegans Hypothetical
           protein Y42G9A.3b protein.
          Length = 295

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +2

Query: 509 HDYHLRRVEEYLHLIKPNFDSLPNNQK--NSLRSFLYVFSGIFGSTYLPVKSMDISMGSE 682
           HDY L  +    H+ +P  D  P N K  +   +   +  G+  +T+  V  +D+S  S 
Sbjct: 38  HDYGLEEIPMRYHIEQPEEDYDPQNVKKLDLTHNSFVILRGL--TTFNNVSVLDVSFNSL 95

Query: 683 LTIGAGTGSSASFAVCLA 736
             +    G+ +S    +A
Sbjct: 96  SALPEDIGTLSSLTTLIA 113


>AC006762-7|AAF60555.1|  375|Caenorhabditis elegans Hypothetical
           protein Y42G9A.3a protein.
          Length = 375

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
 Frame = +2

Query: 509 HDYHLRRVEEYLHLIKPNFDSLPNNQK--NSLRSFLYVFSGIFGSTYLPVKSMDISMGSE 682
           HDY L  +    H+ +P  D  P N K  +   +   +  G+  +T+  V  +D+S  S 
Sbjct: 38  HDYGLEEIPMRYHIEQPEEDYDPQNVKKLDLTHNSFVILRGL--TTFNNVSVLDVSFNSL 95

Query: 683 LTIGAGTGSSASFAVCLA 736
             +    G+ +S    +A
Sbjct: 96  SALPEDIGTLSSLTTLIA 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,231,314
Number of Sequences: 27780
Number of extensions: 489900
Number of successful extensions: 1521
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1521
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)