Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_I08
         (793 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011543-1|AAS15679.1|  746|Drosophila melanogaster LD44281p pro...    30   4.2  
AY069823-1|AAL39968.1|  950|Drosophila melanogaster SD07261p pro...    30   4.2  
AE014297-2132|AAN13692.3|  746|Drosophila melanogaster CG3992-PD...    30   4.2  
AE014297-2131|AAF55261.2| 1264|Drosophila melanogaster CG3992-PA...    30   4.2  
AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB...    30   4.2  
AE014297-2703|AAF55695.1|  454|Drosophila melanogaster CG7535-PA...    29   7.3  

>BT011543-1|AAS15679.1|  746|Drosophila melanogaster LD44281p
           protein.
          Length = 746

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 13/48 (27%), Positives = 29/48 (60%)
 Frame = +2

Query: 533 STSTPDLLFHHFSMKSRVYSNYNKLHSTRIYNLNNHGGINSQQSARRM 676
           S STP  +F+  S   ++++N N  +++ I+N NN+   +S ++  ++
Sbjct: 487 SPSTPTSIFNTPSPTHQLHNNNNNNNNSSIFNNNNNNNSSSNENNNKL 534


>AY069823-1|AAL39968.1|  950|Drosophila melanogaster SD07261p
           protein.
          Length = 950

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 13/48 (27%), Positives = 29/48 (60%)
 Frame = +2

Query: 533 STSTPDLLFHHFSMKSRVYSNYNKLHSTRIYNLNNHGGINSQQSARRM 676
           S STP  +F+  S   ++++N N  +++ I+N NN+   +S ++  ++
Sbjct: 691 SPSTPTSIFNTPSPTHQLHNNNNNNNNSSIFNNNNNNNSSSNENNNKL 738


>AE014297-2132|AAN13692.3|  746|Drosophila melanogaster CG3992-PD,
           isoform D protein.
          Length = 746

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 13/48 (27%), Positives = 29/48 (60%)
 Frame = +2

Query: 533 STSTPDLLFHHFSMKSRVYSNYNKLHSTRIYNLNNHGGINSQQSARRM 676
           S STP  +F+  S   ++++N N  +++ I+N NN+   +S ++  ++
Sbjct: 487 SPSTPTSIFNTPSPTHQLHNNNNNNNNSSIFNNNNNNNSSSNENNNKL 534


>AE014297-2131|AAF55261.2| 1264|Drosophila melanogaster CG3992-PA,
            isoform A protein.
          Length = 1264

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 13/48 (27%), Positives = 29/48 (60%)
 Frame = +2

Query: 533  STSTPDLLFHHFSMKSRVYSNYNKLHSTRIYNLNNHGGINSQQSARRM 676
            S STP  +F+  S   ++++N N  +++ I+N NN+   +S ++  ++
Sbjct: 1005 SPSTPTSIFNTPSPTHQLHNNNNNNNNSSIFNNNNNNNSSSNENNNKL 1052


>AE014297-2130|AAN13691.1| 1249|Drosophila melanogaster CG3992-PB,
            isoform B protein.
          Length = 1249

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 13/48 (27%), Positives = 29/48 (60%)
 Frame = +2

Query: 533  STSTPDLLFHHFSMKSRVYSNYNKLHSTRIYNLNNHGGINSQQSARRM 676
            S STP  +F+  S   ++++N N  +++ I+N NN+   +S ++  ++
Sbjct: 990  SPSTPTSIFNTPSPTHQLHNNNNNNNNSSIFNNNNNNNSSSNENNNKL 1037


>AE014297-2703|AAF55695.1|  454|Drosophila melanogaster CG7535-PA,
           isoform A protein.
          Length = 454

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = -3

Query: 713 KFLAAYANSTNSSSFLQTVDYLFPHGCLSYISWYCVICCNL---STLCFSLKSGEIAGQV 543
           KFL  Y NS  ++     VD LF      Y+    + CC L   S + F L  G +  +V
Sbjct: 216 KFLTDYCNSKTNTGTCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARV 275


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,481,061
Number of Sequences: 53049
Number of extensions: 655390
Number of successful extensions: 1348
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)