Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_I07
         (857 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0297 - 20578031-20578080,20578162-20578236,20578317-205784...    29   4.7  
03_05_0717 + 27097367-27097621,27097744-27097866,27098136-270983...    28   8.3  

>01_05_0297 -
           20578031-20578080,20578162-20578236,20578317-20578416,
           20578476-20578535,20578833-20578907,20578989-20579069,
           20579596-20579665,20579769-20579833,20580008-20580116,
           20580812-20580876,20580964-20581023,20582008-20582134,
           20582215-20582315,20583209-20583316,20583429-20583464,
           20583569-20583714,20585555-20585564
          Length = 445

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +1

Query: 562 QDAGACWTQNFTSNVKDLISAIDYAHAEEATSDTFDFEKVYELIRH 699
           QDA  CWTQ     +   +++    H  E+  ++ + E VY L  H
Sbjct: 196 QDAEECWTQ-LVYTLSQTLTSETRVHCAESGEESLERESVYSLKCH 240


>03_05_0717 +
           27097367-27097621,27097744-27097866,27098136-27098303,
           27098393-27100072
          Length = 741

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 505 FFHTKHAISKKTEFALITLQDAGACWTQ 588
           FF TK+ I+ + + A    +DAG  W Q
Sbjct: 133 FFETKNPITSQGDIAAAVSEDAGVTWQQ 160


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,416,333
Number of Sequences: 37544
Number of extensions: 390716
Number of successful extensions: 888
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)