Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_I07
         (857 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99277-2|CAB16487.1|  557|Caenorhabditis elegans Hypothetical pr...    31   1.4  
AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z92811-2|CAI46583.1|  299|Caenorhabditis elegans Hypothetical pr...    29   4.2  
U29537-6|AAO38648.1|  340|Caenorhabditis elegans Egg laying defe...    28   7.4  
U29537-5|AAO38650.1|  414|Caenorhabditis elegans Egg laying defe...    28   7.4  
U29537-4|AAO38647.1|  450|Caenorhabditis elegans Egg laying defe...    28   7.4  
U29537-3|AAO38646.1|  457|Caenorhabditis elegans Egg laying defe...    28   7.4  
U29537-2|AAK31508.1|  465|Caenorhabditis elegans Egg laying defe...    28   7.4  

>Z99277-2|CAB16487.1|  557|Caenorhabditis elegans Hypothetical
           protein Y53C12A.3 protein.
          Length = 557

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +1

Query: 373 PNVNVPEKIIVCLDVCYDNPNSLYRFGDGTTFSPINMLKRILDFFFHTKHAISKK 537
           P  NVPE  +  ++  Y +       G G  +S       +L +FFHTKH +  K
Sbjct: 489 PQHNVPETGLATIEAIYYSLREYQELGLGRKYS--GEFDDLLYWFFHTKHFVDGK 541


>AC006605-4|AAK85441.2| 1378|Caenorhabditis elegans Hypothetical
            protein C07H6.3 protein.
          Length = 1378

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 460  TTFSPINMLKRILDFFFHTKHAISKKTEFALI 555
            TTF P   LK + DF     H +S K+  AL+
Sbjct: 938  TTFDPTFQLKAVCDFMCDPVHLLSPKSRLALL 969


>Z92811-2|CAI46583.1|  299|Caenorhabditis elegans Hypothetical
           protein T01G1.4 protein.
          Length = 299

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +1

Query: 466 FSPINMLKRILDFFFHTKHAISKKTEFALITLQDAGACWTQNFTSNVKDLIS 621
           F   N+ K IL++ ++ +  ++K T   +    D    W  NF+ N +DLIS
Sbjct: 248 FGYFNLCKAILNYQYY-RTTVTKMTSSKVS--DDNATSWKMNFSGNDRDLIS 296


>U29537-6|AAO38648.1|  340|Caenorhabditis elegans Egg laying
           defective protein 44,isoform d protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 450 W*WHNIFSNQYVETNT*FLFS-YKTCNQ 530
           W +HN+FSN  + T    LFS Y  CN+
Sbjct: 123 WIYHNLFSNNPLPTKQFHLFSAYVKCNK 150


>U29537-5|AAO38650.1|  414|Caenorhabditis elegans Egg laying
           defective protein 44,isoform f protein.
          Length = 414

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 450 W*WHNIFSNQYVETNT*FLFS-YKTCNQ 530
           W +HN+FSN  + T    LFS Y  CN+
Sbjct: 197 WIYHNLFSNNPLPTKQFHLFSAYVKCNK 224


>U29537-4|AAO38647.1|  450|Caenorhabditis elegans Egg laying
           defective protein 44,isoform c protein.
          Length = 450

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 450 W*WHNIFSNQYVETNT*FLFS-YKTCNQ 530
           W +HN+FSN  + T    LFS Y  CN+
Sbjct: 233 WIYHNLFSNNPLPTKQFHLFSAYVKCNK 260


>U29537-3|AAO38646.1|  457|Caenorhabditis elegans Egg laying
           defective protein 44,isoform b protein.
          Length = 457

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 450 W*WHNIFSNQYVETNT*FLFS-YKTCNQ 530
           W +HN+FSN  + T    LFS Y  CN+
Sbjct: 240 WIYHNLFSNNPLPTKQFHLFSAYVKCNK 267


>U29537-2|AAK31508.1|  465|Caenorhabditis elegans Egg laying
           defective protein 44,isoform a protein.
          Length = 465

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 450 W*WHNIFSNQYVETNT*FLFS-YKTCNQ 530
           W +HN+FSN  + T    LFS Y  CN+
Sbjct: 248 WIYHNLFSNNPLPTKQFHLFSAYVKCNK 275


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,043,008
Number of Sequences: 27780
Number of extensions: 405701
Number of successful extensions: 1053
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)