Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_H21
         (538 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y12065-1|CAA72789.1|  602|Homo sapiens hNop56 protein.                 30   4.5  
BC104793-1|AAI04794.1|  594|Homo sapiens nucleolar protein 5A pr...    30   4.5  
BC104791-1|AAI04792.1|  594|Homo sapiens nucleolar protein 5A (5...    30   4.5  
BC018421-1|AAH18421.1|  447|Homo sapiens Unknown (protein for IM...    30   4.5  
AL049712-4|CAC01444.2|  594|Homo sapiens nucleolar protein 5A (5...    30   4.5  
AL049712-3|CAI22416.1|  218|Homo sapiens nucleolar protein 5A (5...    30   4.5  

>Y12065-1|CAA72789.1|  602|Homo sapiens hNop56 protein.
          Length = 602

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 216 KTKGRSSTELVKYCSVDRRSQCFSELVYMLF 124
           K KGR S  L   CS+  R  CFSE+   +F
Sbjct: 369 KNKGRISRYLANKCSIASRIDCFSEVPTSVF 399


>BC104793-1|AAI04794.1|  594|Homo sapiens nucleolar protein 5A
           protein.
          Length = 594

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 216 KTKGRSSTELVKYCSVDRRSQCFSELVYMLF 124
           K KGR S  L   CS+  R  CFSE+   +F
Sbjct: 363 KNKGRISRYLANKCSIASRIDCFSEVPTSVF 393


>BC104791-1|AAI04792.1|  594|Homo sapiens nucleolar protein 5A
           (56kDa with KKE/D repeat) protein.
          Length = 594

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 216 KTKGRSSTELVKYCSVDRRSQCFSELVYMLF 124
           K KGR S  L   CS+  R  CFSE+   +F
Sbjct: 363 KNKGRISRYLANKCSIASRIDCFSEVPTSVF 393


>BC018421-1|AAH18421.1|  447|Homo sapiens Unknown (protein for
           IMAGE:4448930) protein.
          Length = 447

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 216 KTKGRSSTELVKYCSVDRRSQCFSELVYMLF 124
           K KGR S  L   CS+  R  CFSE+   +F
Sbjct: 359 KNKGRISRYLANKCSIASRIDCFSEVPTSVF 389


>AL049712-4|CAC01444.2|  594|Homo sapiens nucleolar protein 5A
           (56kDa with KKE/D repeat) protein.
          Length = 594

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 216 KTKGRSSTELVKYCSVDRRSQCFSELVYMLF 124
           K KGR S  L   CS+  R  CFSE+   +F
Sbjct: 363 KNKGRISRYLANKCSIASRIDCFSEVPTSVF 393


>AL049712-3|CAI22416.1|  218|Homo sapiens nucleolar protein 5A
           (56kDa with KKE/D repeat) protein.
          Length = 218

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 216 KTKGRSSTELVKYCSVDRRSQCFSELVYMLF 124
           K KGR S  L   CS+  R  CFSE+   +F
Sbjct: 103 KNKGRISRYLANKCSIASRIDCFSEVPTSVF 133


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,214,631
Number of Sequences: 237096
Number of extensions: 1764984
Number of successful extensions: 7487
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7468
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)