Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_H13
(834 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 389 e-108
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 389 e-108
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 389 e-108
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 389 e-108
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 389 e-108
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 389 e-108
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 389 e-108
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 389 e-108
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 389 e-108
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 389 e-108
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 389 e-108
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 389 e-108
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 389 e-108
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 389 e-108
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 388 e-107
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 386 e-107
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 381 e-105
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 266 7e-71
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 258 2e-68
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 121 4e-27
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 61 4e-09
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 61 4e-09
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 61 4e-09
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 61 4e-09
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 61 4e-09
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 60 7e-09
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 41 0.006
AF152479-1|AAD43740.1| 807|Homo sapiens protocadherin alpha 1 s... 33 0.96
AF152305-1|AAD43699.1| 950|Homo sapiens protocadherin alpha 1 p... 33 0.96
AC005609-13|AAC34325.1| 807|Homo sapiens KIAA0345-like 13 protein. 33 0.96
BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring comp... 32 2.2
BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring comp... 32 2.2
AK127306-1|BAC86926.1| 254|Homo sapiens protein ( Homo sapiens ... 32 2.2
BC104804-1|AAI04805.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.9
BC104802-1|AAI04803.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.9
BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein. 32 2.9
AJ007610-1|CAC22257.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.9
AF152487-1|AAD43748.1| 842|Homo sapiens protocadherin alpha 9 s... 32 2.9
AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5 s... 32 2.9
AF152317-1|AAD43711.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.9
AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5 p... 32 2.9
AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein. 32 2.9
AC005609-5|AAC34313.1| 842|Homo sapiens KIAA0345-like 5 protein. 32 2.9
AB002343-1|BAA20803.2| 845|Homo sapiens KIAA0345 protein. 32 2.9
BC129807-1|AAI29808.1| 824|Homo sapiens protocadherin alpha 3 p... 31 5.1
BC069064-1|AAH69064.1| 824|Homo sapiens PCDHA3 protein protein. 31 5.1
BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein. 31 5.1
BC036674-1|AAH36674.1| 950|Homo sapiens PCDHA6 protein protein. 31 5.1
AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo pr... 31 5.1
AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens ... 31 5.1
AF152485-1|AAD43746.1| 789|Homo sapiens protocadherin alpha 7 s... 31 5.1
AF152484-1|AAD43745.1| 803|Homo sapiens protocadherin alpha 6 s... 31 5.1
AF152481-1|AAD43742.1| 824|Homo sapiens protocadherin alpha 3 s... 31 5.1
AF152315-1|AAD43709.1| 937|Homo sapiens protocadherin alpha 7 p... 31 5.1
AF152314-1|AAD43708.1| 950|Homo sapiens protocadherin alpha 6 p... 31 5.1
AF152311-1|AAD43705.1| 950|Homo sapiens protocadherin alpha 3 p... 31 5.1
AC005609-11|AAC34323.1| 824|Homo sapiens KIAA0345-like 11 protein. 31 5.1
AC005609-8|AAC34320.1| 803|Homo sapiens KIAA0345-like 8 protein. 31 5.1
AC005609-7|AAC34319.1| 789|Homo sapiens KIAA0345-like 7 protein. 31 5.1
AB209205-1|BAD92442.1| 430|Homo sapiens protocadherin alpha 6 i... 31 5.1
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 6.8
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 6.8
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 6.8
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 6.8
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 6.8
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 6.8
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 389 bits (958), Expect = e-108
Identities = 181/245 (73%), Positives = 213/245 (86%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NV ++ L IGYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 389 bits (958), Expect = e-108
Identities = 181/245 (73%), Positives = 213/245 (86%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NV ++ L IGYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 389 bits (958), Expect = e-108
Identities = 181/245 (73%), Positives = 213/245 (86%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NV ++ L IGYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 389 bits (958), Expect = e-108
Identities = 181/245 (73%), Positives = 213/245 (86%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NV ++ L IGYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 389 bits (958), Expect = e-108
Identities = 181/245 (73%), Positives = 213/245 (86%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NV ++ L IGYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 389 bits (958), Expect = e-108
Identities = 181/245 (73%), Positives = 213/245 (86%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NV ++ L IGYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 389 bits (958), Expect = e-108
Identities = 181/245 (73%), Positives = 213/245 (86%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NV ++ L IGYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 389 bits (958), Expect = e-108
Identities = 181/245 (73%), Positives = 213/245 (86%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NV ++ L IGYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 389 bits (958), Expect = e-108
Identities = 181/245 (73%), Positives = 213/245 (86%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NV ++ L IGYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 389 bits (958), Expect = e-108
Identities = 181/245 (73%), Positives = 213/245 (86%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NV ++ L IGYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 389 bits (958), Expect = e-108
Identities = 181/245 (73%), Positives = 213/245 (86%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NV ++ L IGYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 389 bits (958), Expect = e-108
Identities = 181/245 (73%), Positives = 213/245 (86%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NV ++ L IGYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 389 bits (958), Expect = e-108
Identities = 181/245 (73%), Positives = 213/245 (86%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NV ++ L IGYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 389 bits (958), Expect = e-108
Identities = 181/245 (73%), Positives = 213/245 (86%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NV ++ L IGYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 388 bits (955), Expect = e-107
Identities = 180/245 (73%), Positives = 213/245 (86%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMG+NTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NV ++ L IGYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 386 bits (950), Expect = e-107
Identities = 180/245 (73%), Positives = 212/245 (86%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSF QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NV ++ L IGYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 381 bits (938), Expect = e-105
Identities = 179/245 (73%), Positives = 209/245 (85%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG +VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 637
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 638 SPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALSLAIGYPTIASAPXS 817
SPFS+GLV++QV+D+G+I+ PE+LD E L ++F GV NV ++ L GYPT+AS P S
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHS 240
Query: 818 IANGF 832
I NG+
Sbjct: 241 IINGY 245
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 266 bits (652), Expect = 7e-71
Identities = 124/155 (80%), Positives = 139/155 (89%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 562
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
Score = 40.7 bits (91), Expect = 0.006
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +2
Query: 749 GVANVXALSLAIGYPTIASAPXSIANGF 832
GV NV ++ L IGYPT+AS P SI NG+
Sbjct: 156 GVRNVASVCLQIGYPTVASVPHSIINGY 183
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 258 bits (631), Expect = 2e-68
Identities = 122/155 (78%), Positives = 138/155 (89%)
Frame = +2
Query: 98 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 277
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 278 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 457
MRKAI+ HL+NNPALEKLLP ++GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 119
Query: 458 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 562
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 120 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
Score = 40.7 bits (91), Expect = 0.006
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +2
Query: 749 GVANVXALSLAIGYPTIASAPXSIANGF 832
GV NV ++ L IGYPT+AS P SI NG+
Sbjct: 155 GVRNVASVCLQIGYPTVASVPHSIINGY 182
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 121 bits (291), Expect = 4e-27
Identities = 55/84 (65%), Positives = 69/84 (82%)
Frame = +2
Query: 581 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVAN 760
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV N
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRN 61
Query: 761 VXALSLAIGYPTIASAPXSIANGF 832
V ++ L IGYPT+AS P SI NG+
Sbjct: 62 VASVCLQIGYPTVASVPHSIINGY 85
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 61.3 bits (142), Expect = 4e-09
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Frame = +2
Query: 125 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 292
K N ++ + +D Y FI N+ + +++ IR + + S + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRM-FFGKNKVMMVALGRSP 81
Query: 293 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 472
D +N L ++ ++G VG +FT EV + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 473 HNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 649
P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAE 199
Query: 650 YGLVVKQVYDSGTIFAPEILDIKPE 724
+ + +K ++DS + ++ D PE
Sbjct: 200 FKVTIKYMWDSQSGRFQQMGDDLPE 224
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 61.3 bits (142), Expect = 4e-09
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Frame = +2
Query: 125 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 292
K N ++ + +D Y FI N+ + +++ IR + + S + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRM-FFGKNKVMMVALGRSP 81
Query: 293 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 472
D +N L ++ ++G VG +FT EV + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 473 HNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 649
P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAE 199
Query: 650 YGLVVKQVYDSGTIFAPEILDIKPE 724
+ + +K ++DS + ++ D PE
Sbjct: 200 FKVTIKYMWDSQSGRFQQMGDDLPE 224
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 61.3 bits (142), Expect = 4e-09
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Frame = +2
Query: 125 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 292
K N ++ + +D Y FI N+ + +++ IR + + S + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRM-FFGKNKVMMVALGRSP 81
Query: 293 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 472
D +N L ++ ++G VG +FT EV + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 473 HNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 649
P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAE 199
Query: 650 YGLVVKQVYDSGTIFAPEILDIKPE 724
+ + +K ++DS + ++ D PE
Sbjct: 200 FKVTIKYMWDSQSGRFQQMGDDLPE 224
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 61.3 bits (142), Expect = 4e-09
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Frame = +2
Query: 125 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 292
K N ++ + +D Y FI N+ + +++ IR + + S + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRM-FFGKNKVMMVALGRSP 81
Query: 293 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 472
D +N L ++ ++G VG +FT EV + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 473 HNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 649
P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAE 199
Query: 650 YGLVVKQVYDSGTIFAPEILDIKPE 724
+ + +K ++DS + ++ D PE
Sbjct: 200 FKVTIKYMWDSQSGRFQQMGDDLPE 224
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 61.3 bits (142), Expect = 4e-09
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Frame = +2
Query: 125 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 292
K N ++ + +D Y FI N+ + +++ IR + + S + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRM-FFGKNKVMMVALGRSP 81
Query: 293 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 472
D +N L ++ ++G VG +FT EV + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 473 HNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 649
P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAE 199
Query: 650 YGLVVKQVYDSGTIFAPEILDIKPE 724
+ + +K ++DS + ++ D PE
Sbjct: 200 FKVTIKYMWDSQSGRFQQMGDDLPE 224
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 60.5 bits (140), Expect = 7e-09
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 5/205 (2%)
Frame = +2
Query: 125 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI---- 292
K N ++ + +D Y FI N+ + +++ IR + + S + GKN +M A+
Sbjct: 23 KQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAWKHSRM-FFGKNKVMMVALGRSP 81
Query: 293 KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 472
D +N L ++ ++G VG +FT EV + + AR G A +V +
Sbjct: 82 SDEYKDN--LHQVSKTLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDP 139
Query: 473 HNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFS 649
P + L +PT + +G + +++D + K GD + +A +L +
Sbjct: 140 GPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAE 199
Query: 650 YGLVVKQVYDSGTIFAPEILDIKPE 724
+ + +K ++DS + ++ D PE
Sbjct: 200 FKVTIKYMWDSQSGRFQQMGDDLPE 224
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 40.7 bits (91), Expect = 0.006
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +2
Query: 749 GVANVXALSLAIGYPTIASAPXSIANGF 832
GV NV ++ L IGYPT+AS P SI NG+
Sbjct: 1 GVRNVASVCLQIGYPTVASVPHSIINGY 28
>AF152479-1|AAD43740.1| 807|Homo sapiens protocadherin alpha 1
short form protein protein.
Length = 807
Score = 33.5 bits (73), Expect = 0.96
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>AF152305-1|AAD43699.1| 950|Homo sapiens protocadherin alpha 1
protein.
Length = 950
Score = 33.5 bits (73), Expect = 0.96
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>AC005609-13|AAC34325.1| 807|Homo sapiens KIAA0345-like 13 protein.
Length = 807
Score = 33.5 bits (73), Expect = 0.96
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 226 PYLATWLQYRAHGKKHYDAQSHQRPPGQQSSPRETVAT 339
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 412 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 447
>BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 226 PYLATWLQYRAHGKKHYDAQSHQRPPGQQSSPRETVAT 339
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 412 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 447
>AK127306-1|BAC86926.1| 254|Homo sapiens protein ( Homo sapiens
cDNA FLJ45374 fis, clone BRHIP3019643, highly similar
to Homo sapiens gamma tubulin ring complex protein (76p
gene) (76P). ).
Length = 254
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 226 PYLATWLQYRAHGKKHYDAQSHQRPPGQQSSPRETVAT 339
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 34 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 69
>BC104804-1|AAI04805.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>BC104802-1|AAI04803.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein.
Length = 890
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AJ007610-1|CAC22257.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152487-1|AAD43748.1| 842|Homo sapiens protocadherin alpha 9
short form protein protein.
Length = 842
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5
short form protein protein.
Length = 816
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AF152317-1|AAD43711.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5
protein.
Length = 936
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein.
Length = 816
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AC005609-5|AAC34313.1| 842|Homo sapiens KIAA0345-like 5 protein.
Length = 842
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AB002343-1|BAA20803.2| 845|Homo sapiens KIAA0345 protein.
Length = 845
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 532 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 580
>BC129807-1|AAI29808.1| 824|Homo sapiens protocadherin alpha 3
protein.
Length = 824
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>BC069064-1|AAH69064.1| 824|Homo sapiens PCDHA3 protein protein.
Length = 824
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein.
Length = 568
Score = 31.1 bits (67), Expect = 5.1
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 599 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALS 775
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 282
>BC036674-1|AAH36674.1| 950|Homo sapiens PCDHA6 protein protein.
Length = 950
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo
protein.
Length = 571
Score = 31.1 bits (67), Expect = 5.1
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 599 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALS 775
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 282
>AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ40219 fis, clone TESTI2021637, moderately
similar to LIVER CARBOXYLESTERASE PRECURSOR (EC
3.1.1.1). ).
Length = 207
Score = 31.1 bits (67), Expect = 5.1
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 599 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVXALS 775
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 85 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 139
>AF152485-1|AAD43746.1| 789|Homo sapiens protocadherin alpha 7
short form protein protein.
Length = 789
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152484-1|AAD43745.1| 803|Homo sapiens protocadherin alpha 6
short form protein protein.
Length = 803
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152481-1|AAD43742.1| 824|Homo sapiens protocadherin alpha 3
short form protein protein.
Length = 824
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AF152315-1|AAD43709.1| 937|Homo sapiens protocadherin alpha 7
protein.
Length = 937
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152314-1|AAD43708.1| 950|Homo sapiens protocadherin alpha 6
protein.
Length = 950
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152311-1|AAD43705.1| 950|Homo sapiens protocadherin alpha 3
protein.
Length = 950
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AC005609-11|AAC34323.1| 824|Homo sapiens KIAA0345-like 11 protein.
Length = 824
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AC005609-8|AAC34320.1| 803|Homo sapiens KIAA0345-like 8 protein.
Length = 803
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AC005609-7|AAC34319.1| 789|Homo sapiens KIAA0345-like 7 protein.
Length = 789
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AB209205-1|BAD92442.1| 430|Homo sapiens protocadherin alpha 6
isoform 2 precursor variant protein.
Length = 430
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 212 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 364
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 178 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 226
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.7 bits (66), Expect = 6.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 681 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 562
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 30.7 bits (66), Expect = 6.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 681 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 562
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 276 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 30.7 bits (66), Expect = 6.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 681 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 562
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 30.7 bits (66), Expect = 6.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 681 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 562
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 30.7 bits (66), Expect = 6.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 681 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 562
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 30.7 bits (66), Expect = 6.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 681 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 562
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,745,998
Number of Sequences: 237096
Number of extensions: 3417161
Number of successful extensions: 11827
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 11367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11826
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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