Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_H12
         (763 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0019 + 124594-126477                                             31   1.3  
11_06_0738 - 26807046-26807129,26807720-26807957,26809374-268115...    29   3.1  
02_04_0067 - 19425019-19425288,19425393-19425647,19425766-194259...    29   5.3  

>07_01_0019 + 124594-126477
          Length = 627

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = -2

Query: 114 CSYVTETIFAINGCFSEKLAKINNTFRFGLVTAII 10
           C   TE +FA  GCFS  +  I  +F FGLV A++
Sbjct: 92  CFTGTEALFADLGCFS--IRSIQLSFAFGLVPAVL 124


>11_06_0738 -
           26807046-26807129,26807720-26807957,26809374-26811509,
           26812145-26813253
          Length = 1188

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/33 (42%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
 Frame = +2

Query: 368 QRRESTD-LCSLKLDAEGETRLMSCLDELRNIL 463
           Q RE TD +CS+ +DA+G    ++ L++L+N+L
Sbjct: 170 QFREHTDNVCSVGIDADGMEAALNDLNKLKNLL 202


>02_04_0067 -
           19425019-19425288,19425393-19425647,19425766-19425937,
           19426069-19426302,19426523-19426656,19427663-19427746,
           19428355-19428645,19428788-19429120,19429317-19429390,
           19429464-19429644,19429993-19430096,19430232-19430392,
           19430727-19431040,19431583-19431864,19432431-19432732,
           19433176-19433266,19433368-19433421,19438917-19438993,
           19439081-19439240,19439410-19439494,19439574-19440130
          Length = 1404

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 19/62 (30%), Positives = 33/62 (53%)
 Frame = +2

Query: 362 GPQRRESTDLCSLKLDAEGETRLMSCLDELRNILGDTVSENTMIQSVLKHNFDYNKALDD 541
           GP R    D  S  LD+    +++SCL ++ +I     SE+T++ S+L+   +     DD
Sbjct: 347 GPSRALFMDEISTGLDSSTTFQIVSCLQQVAHI-----SESTILVSLLQPAPETYDLFDD 401

Query: 542 IL 547
           I+
Sbjct: 402 II 403


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,052,698
Number of Sequences: 37544
Number of extensions: 301672
Number of successful extensions: 990
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)