Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_H12
         (763 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81039-5|CAB02770.1|  812|Caenorhabditis elegans Hypothetical pr...    32   0.51 
Z50044-1|CAA90353.2|  184|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U39648-3|AAM15603.1|  434|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U23179-11|AAN63447.1|  293|Caenorhabditis elegans Hypothetical p...    28   6.3  
U23179-10|AAN63446.1|  329|Caenorhabditis elegans Hypothetical p...    28   6.3  
Z32681-5|CAA83606.1|  341|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>Z81039-5|CAB02770.1|  812|Caenorhabditis elegans Hypothetical
           protein C25D7.6 protein.
          Length = 812

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 17/39 (43%), Positives = 27/39 (69%)
 Frame = +2

Query: 398 LKLDAEGETRLMSCLDELRNILGDTVSENTMIQSVLKHN 514
           +K+  +GE+RL+  LDE+R IL +  +E  + QSVL+ N
Sbjct: 43  VKMMNDGESRLVMNLDEIREILPER-AEGLLTQSVLEMN 80


>Z50044-1|CAA90353.2|  184|Caenorhabditis elegans Hypothetical
           protein F22B5.1 protein.
          Length = 184

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 377 ESTDLCSLKLDAEGETRLMSCLDELRNILGD 469
           ESTD     +D+    RL+ C +EL+ +LG+
Sbjct: 82  ESTDALIWVVDSSDRERLLQCSEELKKLLGE 112


>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
            F54B3.1b protein.
          Length = 3394

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 581  WMNLYFYSYHY*VYRLKLCCNQNYV*AHS 495
            +M +YFY+YHY +++  + C    V  H+
Sbjct: 2579 FMTIYFYNYHYSIHKEAVDCTNKIVGFHN 2607


>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
            F54B3.1a protein.
          Length = 3396

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 581  WMNLYFYSYHY*VYRLKLCCNQNYV*AHS 495
            +M +YFY+YHY +++  + C    V  H+
Sbjct: 2579 FMTIYFYNYHYSIHKEAVDCTNKIVGFHN 2607


>U39648-3|AAM15603.1|  434|Caenorhabditis elegans Hypothetical
           protein T13C5.2 protein.
          Length = 434

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = -3

Query: 230 NNYPLPLNVHKNH--RHHSHQSNFCSECYD 147
           NNY    N H N+   +H+H  N C + YD
Sbjct: 182 NNYDYNYNYHHNNCCNYHNHSCNACPKVYD 211


>U23179-11|AAN63447.1|  293|Caenorhabditis elegans Hypothetical
           protein C27D6.4c protein.
          Length = 293

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 287 SPVGFVIGRRSIATHHLEINNY-PLPLNVHKNHRHH 183
           S  G + G  S+A+H L      PLP   H +H HH
Sbjct: 71  SSYGMMHGSHSMASHQLHQQQLSPLPSVAHFSHSHH 106


>U23179-10|AAN63446.1|  329|Caenorhabditis elegans Hypothetical
           protein C27D6.4b protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 287 SPVGFVIGRRSIATHHLEINNY-PLPLNVHKNHRHH 183
           S  G + G  S+A+H L      PLP   H +H HH
Sbjct: 107 SSYGMMHGSHSMASHQLHQQQLSPLPSVAHFSHSHH 142


>Z32681-5|CAA83606.1|  341|Caenorhabditis elegans Hypothetical
           protein F56F3.4 protein.
          Length = 341

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +2

Query: 602 VITNTVKTTTALVAPKVIATSVDQKSAVIKGF-KVDQEPKPNS 727
           ++TN   T   L+ P +  T+ DQ    IKG   V ++PK  S
Sbjct: 99  IVTNPTTTDILLMMPPIFPTNQDQLRKEIKGMHTVHRKPKKMS 141


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,186,301
Number of Sequences: 27780
Number of extensions: 289842
Number of successful extensions: 944
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)