Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_H10
(730 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009750-1|AAH09750.2| 469|Homo sapiens chromosome 20 open read... 76 2e-13
AL118502-2|CAH73078.2| 415|Homo sapiens chromosome 20 open read... 76 2e-13
AL118502-1|CAH73077.2| 469|Homo sapiens chromosome 20 open read... 76 2e-13
AK074650-1|BAC11113.1| 415|Homo sapiens protein ( Homo sapiens ... 76 2e-13
BC092473-1|AAH92473.1| 448|Homo sapiens GPR172B protein protein. 63 1e-09
BC060810-1|AAH60810.1| 448|Homo sapiens G protein-coupled recep... 63 1e-09
AY070775-1|AAL59883.1| 448|Homo sapiens PERV receptor A2 protein. 63 1e-09
AK000922-1|BAA91427.1| 448|Homo sapiens protein ( Homo sapiens ... 63 1e-09
BC002917-1|AAH02917.1| 445|Homo sapiens G protein-coupled recep... 62 2e-09
AY070774-1|AAL59882.1| 445|Homo sapiens PERV-A receptor 1 protein. 62 2e-09
AK027888-1|BAB55433.1| 445|Homo sapiens protein ( Homo sapiens ... 62 2e-09
AK021918-1|BAB13936.1| 445|Homo sapiens protein ( Homo sapiens ... 62 2e-09
AK124803-1|BAC85953.1| 180|Homo sapiens protein ( Homo sapiens ... 31 5.6
>BC009750-1|AAH09750.2| 469|Homo sapiens chromosome 20 open reading
frame 54 protein.
Length = 469
Score = 75.8 bits (178), Expect = 2e-13
Identities = 34/55 (61%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Frame = +1
Query: 562 LLIC-WGIGTWLGVNGLYVQLPLLVERLPEGWALPSSLVLAVQLANIGPXLYGLL 723
LL+C +G+G+W+ +NGL+V+LPLLV LPEGW LPS L + +QLANIGP L LL
Sbjct: 7 LLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYLTVVIQLANIGPLLVTLL 61
>AL118502-2|CAH73078.2| 415|Homo sapiens chromosome 20 open reading
frame 54 protein.
Length = 415
Score = 75.8 bits (178), Expect = 2e-13
Identities = 34/55 (61%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Frame = +1
Query: 562 LLIC-WGIGTWLGVNGLYVQLPLLVERLPEGWALPSSLVLAVQLANIGPXLYGLL 723
LL+C +G+G+W+ +NGL+V+LPLLV LPEGW LPS L + +QLANIGP L LL
Sbjct: 7 LLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYLTVVIQLANIGPLLVTLL 61
>AL118502-1|CAH73077.2| 469|Homo sapiens chromosome 20 open reading
frame 54 protein.
Length = 469
Score = 75.8 bits (178), Expect = 2e-13
Identities = 34/55 (61%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Frame = +1
Query: 562 LLIC-WGIGTWLGVNGLYVQLPLLVERLPEGWALPSSLVLAVQLANIGPXLYGLL 723
LL+C +G+G+W+ +NGL+V+LPLLV LPEGW LPS L + +QLANIGP L LL
Sbjct: 7 LLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYLTVVIQLANIGPLLVTLL 61
>AK074650-1|BAC11113.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ90169 fis, clone MAMMA1000226. ).
Length = 415
Score = 75.8 bits (178), Expect = 2e-13
Identities = 34/55 (61%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Frame = +1
Query: 562 LLIC-WGIGTWLGVNGLYVQLPLLVERLPEGWALPSSLVLAVQLANIGPXLYGLL 723
LL+C +G+G+W+ +NGL+V+LPLLV LPEGW LPS L + +QLANIGP L LL
Sbjct: 7 LLVCVFGMGSWVTINGLWVELPLLVMELPEGWYLPSYLTVVIQLANIGPLLVTLL 61
>BC092473-1|AAH92473.1| 448|Homo sapiens GPR172B protein protein.
Length = 448
Score = 62.9 bits (146), Expect = 1e-09
Identities = 26/54 (48%), Positives = 40/54 (74%)
Frame = +1
Query: 541 RRVTLDVLLICWGIGTWLGVNGLYVQLPLLVERLPEGWALPSSLVLAVQLANIG 702
R V +L+ +G+G+W VNG++V+LP++V+ LPEGW+LPS L + V L N+G
Sbjct: 8 RLVLTHLLVALFGMGSWAAVNGIWVELPVVVKDLPEGWSLPSYLSVVVALGNLG 61
>BC060810-1|AAH60810.1| 448|Homo sapiens G protein-coupled receptor
172B protein.
Length = 448
Score = 62.9 bits (146), Expect = 1e-09
Identities = 26/54 (48%), Positives = 40/54 (74%)
Frame = +1
Query: 541 RRVTLDVLLICWGIGTWLGVNGLYVQLPLLVERLPEGWALPSSLVLAVQLANIG 702
R V +L+ +G+G+W VNG++V+LP++V+ LPEGW+LPS L + V L N+G
Sbjct: 8 RLVLTHLLVALFGMGSWAAVNGIWVELPVVVKDLPEGWSLPSYLSVVVALGNLG 61
>AY070775-1|AAL59883.1| 448|Homo sapiens PERV receptor A2 protein.
Length = 448
Score = 62.9 bits (146), Expect = 1e-09
Identities = 26/54 (48%), Positives = 40/54 (74%)
Frame = +1
Query: 541 RRVTLDVLLICWGIGTWLGVNGLYVQLPLLVERLPEGWALPSSLVLAVQLANIG 702
R V +L+ +G+G+W VNG++V+LP++V+ LPEGW+LPS L + V L N+G
Sbjct: 8 RLVLTHLLVALFGMGSWAAVNGIWVELPVVVKDLPEGWSLPSYLSVVVALGNLG 61
>AK000922-1|BAA91427.1| 448|Homo sapiens protein ( Homo sapiens
cDNA FLJ10060 fis, clone HEMBA1001407. ).
Length = 448
Score = 62.9 bits (146), Expect = 1e-09
Identities = 26/54 (48%), Positives = 40/54 (74%)
Frame = +1
Query: 541 RRVTLDVLLICWGIGTWLGVNGLYVQLPLLVERLPEGWALPSSLVLAVQLANIG 702
R V +L+ +G+G+W VNG++V+LP++V+ LPEGW+LPS L + V L N+G
Sbjct: 8 RLVLTHLLVALFGMGSWAAVNGIWVELPVVVKDLPEGWSLPSYLSVVVALGNLG 61
>BC002917-1|AAH02917.1| 445|Homo sapiens G protein-coupled receptor
172A protein.
Length = 445
Score = 62.1 bits (144), Expect = 2e-09
Identities = 25/54 (46%), Positives = 40/54 (74%)
Frame = +1
Query: 541 RRVTLDVLLICWGIGTWLGVNGLYVQLPLLVERLPEGWALPSSLVLAVQLANIG 702
R V +L+ +G+G+W VNG++V+LP++V+ LPEGW+LPS + + V L N+G
Sbjct: 8 RPVLTHLLVALFGMGSWAAVNGIWVELPVVVKELPEGWSLPSYVSVLVALGNLG 61
>AY070774-1|AAL59882.1| 445|Homo sapiens PERV-A receptor 1 protein.
Length = 445
Score = 62.1 bits (144), Expect = 2e-09
Identities = 25/54 (46%), Positives = 40/54 (74%)
Frame = +1
Query: 541 RRVTLDVLLICWGIGTWLGVNGLYVQLPLLVERLPEGWALPSSLVLAVQLANIG 702
R V +L+ +G+G+W VNG++V+LP++V+ LPEGW+LPS + + V L N+G
Sbjct: 8 RPVLTHLLVALFGMGSWAAVNGIWVELPVVVKELPEGWSLPSYVSVLVALGNLG 61
>AK027888-1|BAB55433.1| 445|Homo sapiens protein ( Homo sapiens
cDNA FLJ14982 fis, clone Y79AA1000258. ).
Length = 445
Score = 62.1 bits (144), Expect = 2e-09
Identities = 25/54 (46%), Positives = 40/54 (74%)
Frame = +1
Query: 541 RRVTLDVLLICWGIGTWLGVNGLYVQLPLLVERLPEGWALPSSLVLAVQLANIG 702
R V +L+ +G+G+W VNG++V+LP++V+ LPEGW+LPS + + V L N+G
Sbjct: 8 RPVLTHLLVALFGMGSWAAVNGIWVELPVVVKELPEGWSLPSYVSVLVALGNLG 61
>AK021918-1|BAB13936.1| 445|Homo sapiens protein ( Homo sapiens
cDNA FLJ11856 fis, clone HEMBA1006789. ).
Length = 445
Score = 62.1 bits (144), Expect = 2e-09
Identities = 25/54 (46%), Positives = 40/54 (74%)
Frame = +1
Query: 541 RRVTLDVLLICWGIGTWLGVNGLYVQLPLLVERLPEGWALPSSLVLAVQLANIG 702
R V +L+ +G+G+W VNG++V+LP++V+ LPEGW+LPS + + V L N+G
Sbjct: 8 RPVLTHLLVALFGMGSWAAVNGIWVELPVVVKELPEGWSLPSYVSVLVALGNLG 61
>AK124803-1|BAC85953.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ42813 fis, clone BRCAN2012355. ).
Length = 180
Score = 30.7 bits (66), Expect = 5.6
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -2
Query: 381 HLCSFTK-YFFLHHHSILF*TF*VHILTR-HIFITV*CF--FFIKLIRCITIYLYLFIQY 214
+LC +T Y H H ++ V+I T HI + + + ++ + CI IY+Y++ Y
Sbjct: 78 YLCMYTHTYMCAHIHMCVYTYIYVYIYTHIHICVHINMYVSIYVYIYTCIQIYIYMYTLY 137
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,883,374
Number of Sequences: 237096
Number of extensions: 2011472
Number of successful extensions: 8095
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8092
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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