Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_H03
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.2
AF003740-9|AAC48140.1| 852|Caenorhabditis elegans Hypothetical ... 30 2.1
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 29 3.6
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 29 3.6
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 4.8
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 4.8
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 4.8
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 6.3
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 28 8.4
>Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical
protein K09B11.5b protein.
Length = 525
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 132 TTATDSLPTASEPTASQPTASEPTASQPTASQ 227
T + P S+P SQP S+P SQP SQ
Sbjct: 468 TVKSPMTPPVSQPPVSQPPVSQPPVSQPPVSQ 499
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 147 SLPTASEPTASQPTASEPTASQPTASQ 227
S P S+P SQP S+P SQP SQ
Sbjct: 478 SQPPVSQPPVSQPPVSQPPVSQPPVSQ 504
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 147 SLPTASEPTASQPTASEPTASQPTASQ 227
S P S+P SQP S+P SQP Q
Sbjct: 483 SQPPVSQPPVSQPPVSQPPVSQPPVPQ 509
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 132 TTATDSLPTASEPTASQPTASEPTASQPTASQ 227
T + ++ + P SQP S+P SQP SQ
Sbjct: 463 TAKSHTVKSPMTPPVSQPPVSQPPVSQPPVSQ 494
>Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical
protein K09B11.5a protein.
Length = 589
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 132 TTATDSLPTASEPTASQPTASEPTASQPTASQ 227
T + P S+P SQP S+P SQP SQ
Sbjct: 532 TVKSPMTPPVSQPPVSQPPVSQPPVSQPPVSQ 563
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 147 SLPTASEPTASQPTASEPTASQPTASQ 227
S P S+P SQP S+P SQP SQ
Sbjct: 542 SQPPVSQPPVSQPPVSQPPVSQPPVSQ 568
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 147 SLPTASEPTASQPTASEPTASQPTASQ 227
S P S+P SQP S+P SQP Q
Sbjct: 547 SQPPVSQPPVSQPPVSQPPVSQPPVPQ 573
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 132 TTATDSLPTASEPTASQPTASEPTASQPTASQ 227
T + ++ + P SQP S+P SQP SQ
Sbjct: 527 TAKSHTVKSPMTPPVSQPPVSQPPVSQPPVSQ 558
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/58 (36%), Positives = 24/58 (41%)
Frame = -1
Query: 691 GGMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGY 518
GG G A GG G G + SA S G + G GSG + G GGGY
Sbjct: 198 GGGGYAVAPSGGGGCGGGGSSGGGGYASAPSG-GGGYATSGGGGSGGYATGGSSGGGY 254
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/58 (36%), Positives = 24/58 (41%)
Frame = -1
Query: 691 GGMGLAQRLRDHSLAGGSGVRGMSEHWSAISCVSSGITSVGDNGSGAIGSVGDHGGGY 518
GG G A GG G G + SA S G + G GSG + G GGGY
Sbjct: 198 GGGGYAVAPSGGGGCGGGGSSGGGGYASAPSG-GGGYATSGGGGSGGYATGGSSGGGY 254
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 147 SLPTASEPTASQPTASEPTASQPTAS 224
S PT S PT S PT P S PT S
Sbjct: 410 SPPTGSPPTGSPPTGRPPRGSPPTGS 435
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 141 TDSLPTASEPTASQPTASEPTASQPT 218
T S PT S PT P S PT S PT
Sbjct: 413 TGSPPTGSPPTGRPPRGSPPTGSPPT 438
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 147 SLPTASEPTASQPTASEPTASQPTAS 224
S PT S PT S PT P S PT S
Sbjct: 431 SPPTGSPPTGSPPTGRPPRGSPPTGS 456
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 141 TDSLPTASEPTASQPTASEPTASQPT 218
T S PT S PT P S PT S PT
Sbjct: 434 TGSPPTGSPPTGRPPRGSPPTGSPPT 459
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 147 SLPTASEPTASQPTASEPTASQPTAS 224
S PT S PT S PT P S PT S
Sbjct: 416 SPPTGSPPTGSPPTGRPPRGSPPTGS 441
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +3
Query: 141 TDSLPTASEPTASQPTASEPTASQPT 218
T S PT S PT P S PT S PT
Sbjct: 419 TGSPPTGSPPTGRPPRGSPPTGSPPT 444
>AF003740-9|AAC48140.1| 852|Caenorhabditis elegans Hypothetical
protein C41D11.6 protein.
Length = 852
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 389 GQAVNAAVDHSWQAVDAVKTVEAKL 463
G V AAVDH+ Q+ DA+ T+E ++
Sbjct: 515 GTFVPAAVDHAVQSTDAITTIECRI 539
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 132 TTATDSLPTASEPTASQPTASEPTAS 209
TT + S T PT S+ T EPTAS
Sbjct: 187 TTTSTSTTTTETPTTSEATTHEPTAS 212
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 132 TTATDSLPTASEPTASQPTASEPTAS 209
TT + S T PT S+ T EPTAS
Sbjct: 137 TTTSTSTTTTETPTTSEATTHEPTAS 162
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 226 CDAVGCDAVGSEAVGCEAVGSEAV 155
C+ GCD GSE V C V + V
Sbjct: 1083 CEDCGCDPTGSEDVSCNLVTGQCV 1106
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 226 CDAVGCDAVGSEAVGCEAVGSEAV 155
C+ GCD GSE V C V + V
Sbjct: 1083 CEDCGCDPTGSEDVSCNLVTGQCV 1106
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 226 CDAVGCDAVGSEAVGCEAVGSEAV 155
C+ GCD GSE V C V + V
Sbjct: 1083 CEDCGCDPTGSEDVSCNLVTGQCV 1106
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 132 TTATDSLPTASEPTASQPTASEPTASQPTAS 224
TT T T SE T + PT + T ++PT +
Sbjct: 242 TTTTTPATTTSETTTTTPTTTTQTTTKPTTT 272
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 727 TVTGVGEQRRDLGGMGLAQRLRDH 656
TV GVG R LGG+ + RLRDH
Sbjct: 251 TVLGVGFDRT-LGGIEMTNRLRDH 273
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,664,048
Number of Sequences: 27780
Number of extensions: 104443
Number of successful extensions: 916
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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