Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_H02
(529 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457016-1|CAG33297.1| 99|Homo sapiens CD14 protein. 95 1e-19
BC003674-1|AAH03674.1| 99|Homo sapiens NADH dehydrogenase (ubi... 95 1e-19
AF047185-1|AAC04270.1| 99|Homo sapiens NADH-ubiquinone oxidore... 95 1e-19
AB054976-1|BAB21453.1| 99|Homo sapiens NADH dehydrogenase (ubi... 95 1e-19
BC053373-1|AAH53373.1| 202|Homo sapiens mitochondrial ribosomal... 35 0.20
BC052639-1|AAH52639.1| 164|Homo sapiens MRPL43 protein protein. 35 0.20
BC041165-1|AAH41165.1| 215|Homo sapiens mitochondrial ribosomal... 35 0.20
BC015905-1|AAH15905.1| 159|Homo sapiens mitochondrial ribosomal... 35 0.20
AL133215-9|CAI10923.1| 159|Homo sapiens mitochondrial ribosomal... 35 0.20
AL133215-8|CAI10922.1| 164|Homo sapiens mitochondrial ribosomal... 35 0.20
AL133215-7|CAI10921.1| 168|Homo sapiens mitochondrial ribosomal... 35 0.20
AL133215-6|CAI10920.1| 202|Homo sapiens mitochondrial ribosomal... 35 0.20
AL133215-5|CAI10919.1| 215|Homo sapiens mitochondrial ribosomal... 35 0.20
AL133215-4|CAI10918.1| 261|Homo sapiens mitochondrial ribosomal... 35 0.20
AL133215-3|CAI10917.1| 184|Homo sapiens mitochondrial ribosomal... 35 0.20
AK095556-1|BAC04572.1| 215|Homo sapiens protein ( Homo sapiens ... 35 0.20
AB049656-1|BAB40861.1| 197|Homo sapiens mitochondrial ribosomal... 35 0.20
BC031287-1|AAH31287.1| 145|Homo sapiens MRPL43 protein protein. 31 2.5
>CR457016-1|CAG33297.1| 99|Homo sapiens CD14 protein.
Length = 99
Score = 95.5 bits (227), Expect = 1e-19
Identities = 41/72 (56%), Positives = 53/72 (73%)
Frame = +2
Query: 161 IHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLT 340
IHLCQ S S+GVR+FI+ YV +KK NP+ PILIRECS +QP++WARY G E + PL
Sbjct: 21 IHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQETNVPLN 80
Query: 341 NLSANDVLSAIK 376
N SA+ V A++
Sbjct: 81 NFSADQVTRALE 92
>BC003674-1|AAH03674.1| 99|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 2, 8kDa protein.
Length = 99
Score = 95.5 bits (227), Expect = 1e-19
Identities = 41/72 (56%), Positives = 53/72 (73%)
Frame = +2
Query: 161 IHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLT 340
IHLCQ S S+GVR+FI+ YV +KK NP+ PILIRECS +QP++WARY G E + PL
Sbjct: 21 IHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQETNVPLN 80
Query: 341 NLSANDVLSAIK 376
N SA+ V A++
Sbjct: 81 NFSADQVTRALE 92
>AF047185-1|AAC04270.1| 99|Homo sapiens NADH-ubiquinone
oxidoreductase subunit CI-B8 protein.
Length = 99
Score = 95.5 bits (227), Expect = 1e-19
Identities = 41/72 (56%), Positives = 53/72 (73%)
Frame = +2
Query: 161 IHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLT 340
IHLCQ S S+GVR+FI+ YV +KK NP+ PILIRECS +QP++WARY G E + PL
Sbjct: 21 IHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQETNVPLN 80
Query: 341 NLSANDVLSAIK 376
N SA+ V A++
Sbjct: 81 NFSADQVTRALE 92
>AB054976-1|BAB21453.1| 99|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex 2 protein.
Length = 99
Score = 95.5 bits (227), Expect = 1e-19
Identities = 41/72 (56%), Positives = 53/72 (73%)
Frame = +2
Query: 161 IHLCQTSKQSEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLT 340
IHLCQ S S+GVR+FI+ YV +KK NP+ PILIRECS +QP++WARY G E + PL
Sbjct: 21 IHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQPKLWARYAFGQETNVPLN 80
Query: 341 NLSANDVLSAIK 376
N SA+ V A++
Sbjct: 81 NFSADQVTRALE 92
>BC053373-1|AAH53373.1| 202|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 202
Score = 34.7 bits (76), Expect = 0.20
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 188 SEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLTNLSANDVLS 367
S G REF++ ++ + NP I + PRV A Y GA + + S ++ +
Sbjct: 40 SRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVREESIHCKSVEEIST 99
Query: 368 AIKQ 379
+++
Sbjct: 100 LVQK 103
>BC052639-1|AAH52639.1| 164|Homo sapiens MRPL43 protein protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.20
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 188 SEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLTNLSANDVLS 367
S G REF++ ++ + NP I + PRV A Y GA + + S ++ +
Sbjct: 40 SRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVREESIHCKSVEEIST 99
Query: 368 AIKQ 379
+++
Sbjct: 100 LVQK 103
>BC041165-1|AAH41165.1| 215|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 215
Score = 34.7 bits (76), Expect = 0.20
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 188 SEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLTNLSANDVLS 367
S G REF++ ++ + NP I + PRV A Y GA + + S ++ +
Sbjct: 40 SRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVREESIHCKSVEEIST 99
Query: 368 AIKQ 379
+++
Sbjct: 100 LVQK 103
>BC015905-1|AAH15905.1| 159|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 159
Score = 34.7 bits (76), Expect = 0.20
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 188 SEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLTNLSANDVLS 367
S G REF++ ++ + NP I + PRV A Y GA + + S ++ +
Sbjct: 40 SRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVREESIHCKSVEEIST 99
Query: 368 AIKQ 379
+++
Sbjct: 100 LVQK 103
>AL133215-9|CAI10923.1| 159|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 159
Score = 34.7 bits (76), Expect = 0.20
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 188 SEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLTNLSANDVLS 367
S G REF++ ++ + NP I + PRV A Y GA + + S ++ +
Sbjct: 40 SRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVREESIHCKSVEEIST 99
Query: 368 AIKQ 379
+++
Sbjct: 100 LVQK 103
>AL133215-8|CAI10922.1| 164|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 164
Score = 34.7 bits (76), Expect = 0.20
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 188 SEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLTNLSANDVLS 367
S G REF++ ++ + NP I + PRV A Y GA + + S ++ +
Sbjct: 40 SRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVREESIHCKSVEEIST 99
Query: 368 AIKQ 379
+++
Sbjct: 100 LVQK 103
>AL133215-7|CAI10921.1| 168|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 168
Score = 34.7 bits (76), Expect = 0.20
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 188 SEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLTNLSANDVLS 367
S G REF++ ++ + NP I + PRV A Y GA + + S ++ +
Sbjct: 36 SRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVREESIHCKSVEEIST 95
Query: 368 AIKQ 379
+++
Sbjct: 96 LVQK 99
>AL133215-6|CAI10920.1| 202|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 202
Score = 34.7 bits (76), Expect = 0.20
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 188 SEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLTNLSANDVLS 367
S G REF++ ++ + NP I + PRV A Y GA + + S ++ +
Sbjct: 40 SRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVREESIHCKSVEEIST 99
Query: 368 AIKQ 379
+++
Sbjct: 100 LVQK 103
>AL133215-5|CAI10919.1| 215|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 215
Score = 34.7 bits (76), Expect = 0.20
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 188 SEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLTNLSANDVLS 367
S G REF++ ++ + NP I + PRV A Y GA + + S ++ +
Sbjct: 40 SRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVREESIHCKSVEEIST 99
Query: 368 AIKQ 379
+++
Sbjct: 100 LVQK 103
>AL133215-4|CAI10918.1| 261|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 261
Score = 34.7 bits (76), Expect = 0.20
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 188 SEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLTNLSANDVLS 367
S G REF++ ++ + NP I + PRV A Y GA + + S ++ +
Sbjct: 40 SRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVREESIHCKSVEEIST 99
Query: 368 AIKQ 379
+++
Sbjct: 100 LVQK 103
>AL133215-3|CAI10917.1| 184|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 184
Score = 34.7 bits (76), Expect = 0.20
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 188 SEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLTNLSANDVLS 367
S G REF++ ++ + NP I + PRV A Y GA + + S ++ +
Sbjct: 40 SRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVREESIHCKSVEEIST 99
Query: 368 AIKQ 379
+++
Sbjct: 100 LVQK 103
>AK095556-1|BAC04572.1| 215|Homo sapiens protein ( Homo sapiens
cDNA FLJ38237 fis, clone FCBBF2005637. ).
Length = 215
Score = 34.7 bits (76), Expect = 0.20
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 188 SEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLTNLSANDVLS 367
S G REF++ ++ + NP I + PRV A Y GA + + S ++ +
Sbjct: 40 SRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVREESIHCKSVEEIST 99
Query: 368 AIKQ 379
+++
Sbjct: 100 LVQK 103
>AB049656-1|BAB40861.1| 197|Homo sapiens mitochondrial ribosomal
protein bMRP36a protein.
Length = 197
Score = 34.7 bits (76), Expect = 0.20
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +2
Query: 188 SEGVREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLTNLSANDVLS 367
S G REF++ ++ + NP I + PRV A Y GA + + S ++ +
Sbjct: 40 SRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVREESIHCKSVEEIST 99
Query: 368 AIKQ 379
+++
Sbjct: 100 LVQK 103
>BC031287-1|AAH31287.1| 145|Homo sapiens MRPL43 protein protein.
Length = 145
Score = 31.1 bits (67), Expect = 2.5
Identities = 14/61 (22%), Positives = 29/61 (47%)
Frame = +2
Query: 197 VREFIKNNYVNIKKENPNFPILIRECSGIQPRVWARYERGAEKSTPLTNLSANDVLSAIK 376
+REF++ ++ + NP I + PRV A Y GA + + S ++ + ++
Sbjct: 29 LREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYINGAVREESIHCKSVEEISTLVQ 88
Query: 377 Q 379
+
Sbjct: 89 K 89
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,175,808
Number of Sequences: 237096
Number of extensions: 836014
Number of successful extensions: 1176
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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