Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_G21
(705 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32F12.10 |||phosphoglucomutase |Schizosaccharomyces pombe|ch... 199 4e-52
SPCC1840.05c |||phosphomannomutase |Schizosaccharomyces pombe|ch... 34 0.017
SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase |Schizosacc... 29 0.86
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 28 1.5
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 27 3.5
SPCC965.12 |||dipeptidyl aminopeptidase |Schizosaccharomyces pom... 27 3.5
SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces pombe... 26 6.0
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 25 8.0
SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate reductase/... 25 8.0
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 25 8.0
>SPBC32F12.10 |||phosphoglucomutase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 199 bits (485), Expect = 4e-52
Identities = 101/181 (55%), Positives = 124/181 (68%), Gaps = 1/181 (0%)
Frame = +2
Query: 164 VDTKPYEGQKPGTSGLRKKVKVFVQENYTENFIQCILDVNKTSLIGSTLVVGGDGRYLVK 343
+ TKPYEGQ+PGTSGLRKKV VF Q NY ENF+Q +DV + S G+ LVVGGDGRY
Sbjct: 5 IPTKPYEGQRPGTSGLRKKVTVFEQPNYVENFVQATMDVVEPSAKGAHLVVGGDGRYFNF 64
Query: 344 EVVDKIIKISAXNGVSKLIVGQNGILSTPAVSYIIRKYKTLGGIVLTASHNPGGVDEDFG 523
+ I I+A NGV K+IVG NG LSTPA S+IIRKYK GGI+LTASHN GG DFG
Sbjct: 65 HAIQVIAAIAAGNGVEKIIVGTNGYLSTPAASHIIRKYKLTGGIILTASHNAGGPKNDFG 124
Query: 524 IKFNCSNGGPASDATTDAIYKLSTSIKQYKIVPDLNCAIDKIDVHNFKVXQ-RQFTVEVI 700
IK+N NGGPA ++ T+ IY ++ +I +YK+V I +D+ V + TVEVI
Sbjct: 125 IKYNLGNGGPAPESVTEKIYSITKTISEYKMV-----KIPPLDLTTTGVRRYGPLTVEVI 179
Query: 701 D 703
D
Sbjct: 180 D 180
>SPCC1840.05c |||phosphomannomutase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 587
Score = 34.3 bits (75), Expect = 0.017
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 8/125 (6%)
Frame = +2
Query: 197 GTSGLRKKVKV-FVQENY------TENFIQCILD-VNKTSLIGSTLVVGGDGRYLVKEVV 352
GTSGLR ++ F + N ++ F + +L V + +G +V+G D R+
Sbjct: 48 GTSGLRAEIGAGFARMNCLTVIQASQGFAEYLLQTVPSAAKLG--VVIGHDHRHKSNTFA 105
Query: 353 DKIIKISAXNGVSKLIVGQNGILSTPAVSYIIRKYKTLGGIVLTASHNPGGVDEDFGIKF 532
+ G ++ TP V + ++ T G+++TASHNP + G K
Sbjct: 106 RLTAAVFLQKGFKTYFFDH--LVHTPLVPFAVKTLGTAAGVMITASHNPAAYN---GYKV 160
Query: 533 NCSNG 547
NG
Sbjct: 161 YWGNG 165
>SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 518
Score = 28.7 bits (61), Expect = 0.86
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 452 KYKTLGGIVLTASHNPGGVDEDFGIKFNCSNGG 550
K KT+G +++TASHNP ED G+K ++GG
Sbjct: 40 KGKTIG-VMITASHNP---VEDNGVKIIDADGG 68
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 301 SYQRGFIHVQNALNKILRVVFLDENFNFFTQSTCARLLALIRFSVNHYTV 152
S QR + + AL + R+V LDE+ +T R+ ++R + H TV
Sbjct: 1327 SGQRQILALARALVRKSRIVILDESTASVDDTTDRRIQQMLRAAFKHATV 1376
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 26.6 bits (56), Expect = 3.5
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -3
Query: 679 PLXYLKIMYVDFVNGAI*IWDNLVLLYRGAEFVDGIGGSIGS--RAPVTAV 533
P YL + + F +GA+ IW NL + R EF + G I S +APV V
Sbjct: 169 PSTYLNKILLGFSDGALQIW-NLRVSKRVHEFQEFFGDGITSLTQAPVLDV 218
>SPCC965.12 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 416
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/69 (24%), Positives = 28/69 (40%)
Frame = +2
Query: 344 EVVDKIIKISAXNGVSKLIVGQNGILSTPAVSYIIRKYKTLGGIVLTASHNPGGVDEDFG 523
+ D I NG + +G G+ ++R+Y +LG +T +HN D F
Sbjct: 122 DCADDAIAAFRNNGKIAIALGVEGLHQVDTSLAVLRQYYSLGVRYITLTHN---CDNPFA 178
Query: 524 IKFNCSNGG 550
+ GG
Sbjct: 179 TAASSITGG 187
>SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 325
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +2
Query: 332 YLVKEVVDKIIKISAXNGVSKLIVGQNGILSTPAVSYIIRKYKTL 466
Y +K++ K +KI N + +V N +L + KYK L
Sbjct: 246 YDMKQIYRKNLKIIGCNSLLLSLVESNSLLKNMVAKFEAGKYKVL 290
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 573 SVVASEAGPPLLQLNFMPKSSSTPPGLWEAVRTIPPR 463
S V ++ PP Q N+ P +SS+ P + PP+
Sbjct: 200 SAVKAQPPPPPPQQNYPPAASSSAPPMQYQQTAYPPQ 236
>SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate
reductase/acetylglutamate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 885
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 331 PSVSSDNQRRSYQRGFIHVQNALNKILRVVFLDENFNFFT 212
PS S NQ+RSY + +N K+ R +FL FF+
Sbjct: 516 PSSSQINQKRSYSTSSLFSKN--KKMNRSLFLKGGKRFFS 553
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 25.4 bits (53), Expect = 8.0
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 449 RKYKTLGGIVLTASHNPGGVDEDFGIKFNCSNGGPASDATT 571
++Y L GI++T+++ + G N SN GP T
Sbjct: 475 KQYMKLSGIIVTSNYRKNVLHLVVGCGINVSNLGPTVSLNT 515
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,947,947
Number of Sequences: 5004
Number of extensions: 63524
Number of successful extensions: 177
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 327172622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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