Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_G06
(821 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19711-1|AAA81779.1| 895|Homo sapiens dystroglycan protein. 47 7e-05
BC014616-1|AAH14616.1| 895|Homo sapiens dystroglycan 1 (dystrop... 47 7e-05
BC012740-1|AAH12740.1| 895|Homo sapiens dystroglycan 1 (dystrop... 47 7e-05
Y16718-1|CAA76349.1| 519|Homo sapiens filensin protein. 33 1.2
Y16717-1|CAA76348.1| 665|Homo sapiens filensin protein. 33 1.2
BC041483-1|AAH41483.1| 540|Homo sapiens BFSP1 protein protein. 33 1.2
AL132765-1|CAH74032.1| 540|Homo sapiens beaded filament structu... 33 1.2
AL031664-6|CAB89430.1| 665|Homo sapiens beaded filament structu... 33 1.2
AL031664-1|CAI21689.1| 540|Homo sapiens beaded filament structu... 33 1.2
AF039655-1|AAB94939.1| 665|Homo sapiens filensin protein. 33 1.2
>L19711-1|AAA81779.1| 895|Homo sapiens dystroglycan protein.
Length = 895
Score = 47.2 bits (107), Expect = 7e-05
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = +3
Query: 546 GVPDTLAYVGHLFRMEIPKEAFSGKVVAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQD 725
G+PD A VG FR+ IP + + KV + P+WL DS+ + G+P D
Sbjct: 66 GIPDGTAVVGRSFRVTIPTDLIASSGDIIKVSAAGKEALPSWLHWDSQSHTLEGLPLDTD 125
Query: 726 IGTHTFTVTA 755
G H +V+A
Sbjct: 126 KGVHYISVSA 135
Score = 37.5 bits (83), Expect = 0.058
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Frame = +3
Query: 564 AYVGHLFRMEIPKEAF-------SGKV-VAYKVRSDHGRRTPNWLAVDSRHGLISGIPQY 719
A+VG F ++IP + F + K+ + K+R +W+ +S L+ G+P
Sbjct: 508 AWVGTYFEVKIPSDTFYDHEDTTTDKLKLTLKLREQQLVGEKSWVQFNSNSQLMYGLPDS 567
Query: 720 QDIGTHTFTVTAQGTTK-GLTATDSFTIEVKR 812
+G H + + A T K GL+A D+F I V R
Sbjct: 568 SHVGKHEYFMHA--TDKGGLSAVDAFEIHVHR 597
>BC014616-1|AAH14616.1| 895|Homo sapiens dystroglycan 1
(dystrophin-associated glycoprotein 1) protein.
Length = 895
Score = 47.2 bits (107), Expect = 7e-05
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = +3
Query: 546 GVPDTLAYVGHLFRMEIPKEAFSGKVVAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQD 725
G+PD A VG FR+ IP + + KV + P+WL DS+ + G+P D
Sbjct: 66 GIPDGTAVVGRSFRVTIPTDLIASSGDIIKVSAAGKEALPSWLHWDSQSHTLEGLPLDTD 125
Query: 726 IGTHTFTVTA 755
G H +V+A
Sbjct: 126 KGVHYISVSA 135
Score = 37.5 bits (83), Expect = 0.058
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Frame = +3
Query: 564 AYVGHLFRMEIPKEAF-------SGKV-VAYKVRSDHGRRTPNWLAVDSRHGLISGIPQY 719
A+VG F ++IP + F + K+ + K+R +W+ +S L+ G+P
Sbjct: 508 AWVGTYFEVKIPSDTFYDHEDTTTDKLKLTLKLREQQLVGEKSWVQFNSNSQLMYGLPDS 567
Query: 720 QDIGTHTFTVTAQGTTK-GLTATDSFTIEVKR 812
+G H + + A T K GL+A D+F I V R
Sbjct: 568 SHVGKHEYFMHA--TDKGGLSAVDAFEIHVHR 597
>BC012740-1|AAH12740.1| 895|Homo sapiens dystroglycan 1
(dystrophin-associated glycoprotein 1) protein.
Length = 895
Score = 47.2 bits (107), Expect = 7e-05
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = +3
Query: 546 GVPDTLAYVGHLFRMEIPKEAFSGKVVAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQD 725
G+PD A VG FR+ IP + + KV + P+WL DS+ + G+P D
Sbjct: 66 GIPDGTAVVGRSFRVTIPTDLIASSGDIIKVSAAGKEALPSWLHWDSQSHTLEGLPLDTD 125
Query: 726 IGTHTFTVTA 755
G H +V+A
Sbjct: 126 KGVHYISVSA 135
Score = 37.5 bits (83), Expect = 0.058
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Frame = +3
Query: 564 AYVGHLFRMEIPKEAF-------SGKV-VAYKVRSDHGRRTPNWLAVDSRHGLISGIPQY 719
A+VG F ++IP + F + K+ + K+R +W+ +S L+ G+P
Sbjct: 508 AWVGTYFEVKIPSDTFYDHEDTTTDKLKLTLKLREQQLVGEKSWVQFNSNSQLMYGLPDS 567
Query: 720 QDIGTHTFTVTAQGTTK-GLTATDSFTIEVKR 812
+G H + + A T K GL+A D+F I V R
Sbjct: 568 SHVGKHEYFMHA--TDKGGLSAVDAFEIHVHR 597
>Y16718-1|CAA76349.1| 519|Homo sapiens filensin protein.
Length = 519
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +3
Query: 624 VAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQDIGTHTFTVTAQGTTKGLTATDS 791
V KVRS TP L RH L++G Y D + ++TA+G A DS
Sbjct: 302 VKEKVRSPKEPETPTELYTKERHVLVTGDANYVDPRFYVSSITAKGGVAVSVAEDS 357
>Y16717-1|CAA76348.1| 665|Homo sapiens filensin protein.
Length = 665
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +3
Query: 624 VAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQDIGTHTFTVTAQGTTKGLTATDS 791
V KVRS TP L RH L++G Y D + ++TA+G A DS
Sbjct: 448 VKEKVRSPKEPETPTELYTKERHVLVTGDANYVDPRFYVSSITAKGGVAVSVAEDS 503
>BC041483-1|AAH41483.1| 540|Homo sapiens BFSP1 protein protein.
Length = 540
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +3
Query: 624 VAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQDIGTHTFTVTAQGTTKGLTATDS 791
V KVRS TP L RH L++G Y D + ++TA+G A DS
Sbjct: 323 VKEKVRSPKEPETPTELYTKERHVLVTGDANYVDPRFYVSSITAKGGVAVSVAEDS 378
>AL132765-1|CAH74032.1| 540|Homo sapiens beaded filament structural
protein 1, filensin protein.
Length = 540
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +3
Query: 624 VAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQDIGTHTFTVTAQGTTKGLTATDS 791
V KVRS TP L RH L++G Y D + ++TA+G A DS
Sbjct: 323 VKEKVRSPKEPETPTELYTKERHVLVTGDANYVDPRFYVSSITAKGGVAVSVAEDS 378
>AL031664-6|CAB89430.1| 665|Homo sapiens beaded filament structural
protein 1, filensin protein.
Length = 665
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +3
Query: 624 VAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQDIGTHTFTVTAQGTTKGLTATDS 791
V KVRS TP L RH L++G Y D + ++TA+G A DS
Sbjct: 448 VKEKVRSPKEPETPTELYTKERHVLVTGDANYVDPRFYVSSITAKGGVAVSVAEDS 503
>AL031664-1|CAI21689.1| 540|Homo sapiens beaded filament structural
protein 1, filensin protein.
Length = 540
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +3
Query: 624 VAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQDIGTHTFTVTAQGTTKGLTATDS 791
V KVRS TP L RH L++G Y D + ++TA+G A DS
Sbjct: 323 VKEKVRSPKEPETPTELYTKERHVLVTGDANYVDPRFYVSSITAKGGVAVSVAEDS 378
>AF039655-1|AAB94939.1| 665|Homo sapiens filensin protein.
Length = 665
Score = 33.1 bits (72), Expect = 1.2
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +3
Query: 624 VAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQDIGTHTFTVTAQGTTKGLTATDS 791
V KVRS TP L RH L++G Y D + ++TA+G A DS
Sbjct: 448 VKEKVRSPKEPETPTELYTKERHVLVTGDANYVDPRFYVSSITAKGGVAVSVAEDS 503
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,538,499
Number of Sequences: 237096
Number of extensions: 2228792
Number of successful extensions: 8105
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8102
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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