Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_G01
(795 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 359 e-99
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 333 7e-92
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 64 1e-10
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 49 4e-06
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 49 4e-06
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 45 7e-05
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 30 1.7
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 29 3.8
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 28 6.7
AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical ... 28 8.9
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 359 bits (884), Expect = e-99
Identities = 172/210 (81%), Positives = 190/210 (90%)
Frame = +1
Query: 166 SQPRLTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFE 345
+ PRL Y+TV GVNGPLVIL++VKFP+FSEIV++ L DG+ RSGQVLE+S +KAVVQVFE
Sbjct: 23 TNPRLIYQTVCGVNGPLVILNDVKFPQFSEIVKITLPDGSKRSGQVLEISKNKAVVQVFE 82
Query: 346 GTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQPINP 525
GTSGIDAKNT+CEFTGDILRTPVSEDMLGR+FNGSGKPIDKGPP+LAEDFLDI GQPINP
Sbjct: 83 GTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAEDFLDINGQPINP 142
Query: 526 WSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICXQAGLVKVPGKSV 705
WSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSA+GLPHNEIAAQI Q GLV++P +
Sbjct: 143 WSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSASGLPHNEIAAQIVRQGGLVQLPDR-- 200
Query: 706 LDDHEDNFAIVFAAMGVNMETAXFFKQDFE 795
+ NFAIVFAAMGVNMETA FFKQDFE
Sbjct: 201 -PHEQTNFAIVFAAMGVNMETARFFKQDFE 229
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 333 bits (819), Expect = 7e-92
Identities = 160/212 (75%), Positives = 185/212 (87%)
Frame = +1
Query: 160 FISQPRLTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQV 339
+ ++P+LTY+TV GVNGPLVI+ VKFP F+EIV++ L +G +R GQVLE S +KAVVQV
Sbjct: 33 YSTKPKLTYQTVFGVNGPLVIVHNVKFPMFNEIVKITLPNGQIRMGQVLESSKNKAVVQV 92
Query: 340 FEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQPI 519
FEGT+G+DAK T CEFTGDI R+PVS DMLGR+FNGSGKPIDKGPP+L ED+LDI GQPI
Sbjct: 93 FEGTTGVDAKFTTCEFTGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPI 152
Query: 520 NPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQICXQAGLVKVPGK 699
NP++RIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQI Q GLV++PG+
Sbjct: 153 NPFNRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGLPHNEIAAQIVRQGGLVQLPGR 212
Query: 700 SVLDDHEDNFAIVFAAMGVNMETAXFFKQDFE 795
++ NFAIVFAAMGVNMETA FFKQDFE
Sbjct: 213 ---NNETVNFAIVFAAMGVNMETARFFKQDFE 241
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 63.7 bits (148), Expect = 1e-10
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 4/116 (3%)
Frame = +1
Query: 301 VLEVS---GSKAVVQV-FEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDK 468
+LEVS G V + +GT G+ + + TGD ++ PV + LGR+ N G+PID+
Sbjct: 105 ILEVSQHLGDNVVRCIAMDGTEGLVRGQPVAD-TGDPIKIPVGPETLGRIMNVIGEPIDE 163
Query: 469 GPPILAEDFLDIQGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSAAGL 636
PI +++F I + +E++ TGI +D++ A+G KI +F AG+
Sbjct: 164 RGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGV 219
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 48.8 bits (111), Expect = 4e-06
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +1
Query: 295 GQVLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPID-KG 471
G + + V VF G + + + + TG I+ PV + +LGRV + G PID KG
Sbjct: 62 GMAMNLDVDNVGVVVF-GNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKG 120
Query: 472 PPILA-EDFLDIQGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQK 609
P A ++++ I P R+ E + TG+ A+D + I RGQ+
Sbjct: 121 PIANARRSRVEVKAPGIIP--RLSVREPMVTGVKAVDSLVPIGRGQR 165
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 48.8 bits (111), Expect = 4e-06
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 2/107 (1%)
Frame = +1
Query: 295 GQVLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPID-KG 471
G + + V VF G + + + + TG I+ PV + +LGRV + G PID KG
Sbjct: 89 GMAMNLDVDNVGVVVF-GNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKG 147
Query: 472 PPILA-EDFLDIQGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQK 609
P A ++++ I P R+ E + TG+ A+D + I RGQ+
Sbjct: 148 PIANARRSRVEVKAPGIIP--RLSVREPMVTGVKAVDSLVPIGRGQR 192
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 44.8 bits (101), Expect = 7e-05
Identities = 25/94 (26%), Positives = 51/94 (54%)
Frame = +1
Query: 181 TYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFEGTSGI 360
+Y V GV+GP+V +++ E+V++ + G+++ + G A +QV+E TSG+
Sbjct: 6 SYGFVYGVSGPVVTAEKMAGSAMYELVRVGHQELV---GEIIRLEGDYATIQVYEETSGV 62
Query: 361 DAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPI 462
+ + TG L + ++G +F+G +P+
Sbjct: 63 TIGDPVLR-TGKPLSVELGPGIMGSIFDGIQRPL 95
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 30.3 bits (65), Expect = 1.7
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +1
Query: 292 SGQVLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPID-K 468
+G+VL + + +V+ G I A+ + EF I ++ D+ G PID K
Sbjct: 56 TGKVLSIGDG--IARVY-GLKNIQAEE-MVEFDSGIKGMAMNLDVDNVGVVVLGNPIDGK 111
Query: 469 GPPILAE-DFLDIQGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQK 609
GP A ++++ I P R+ E + TG+ A+D + I RGQ+
Sbjct: 112 GPIANARRSRVEVKAPGIIP--RLSVREPMVTGVKAVDSLVPIGRGQR 157
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/89 (21%), Positives = 39/89 (43%)
Frame = -2
Query: 491 SSAKIGGPLSMGLPEPLNTRPNMSSETGVRRMSPVNSQSVFFASIPDVPSNTWTTALEPL 312
SS+ +G P+P + ++ S TG S ++ +PS+T T
Sbjct: 743 SSSTMGSTAGSSSPQPTASSTSVPSSTGATSSGSTVGSSTMGSTQSSLPSSTMTNT--GS 800
Query: 311 TSST*PERRVPSASFSCTISENLGNLTSS 225
T ST + S+++ + +E + + T++
Sbjct: 801 TGSTVTNQLASSSTYGASSTEPIASSTAN 829
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 344 SNTWTTALEPLTSST*PERRVPSASFSCTISENLGNLTSS--KMTRGPFTP 198
S+T +T E TSST P ++ + T+S TSS TRG F P
Sbjct: 877 SSTGSTTSESTTSSTEPPTTQEESNTTTTLSSTTPFTTSSTESFTRGGFIP 927
>AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical
protein Y47D3B.9 protein.
Length = 761
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 226 DEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFEGTSGIDAKNTL 378
D+ F +FSE + S V++ S SK FEG+SG DA +T+
Sbjct: 231 DDGIFNRFSEKLAKMARRKQQESTLVIDPSHSKDDSAFFEGSSGSDAPSTI 281
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,138,872
Number of Sequences: 27780
Number of extensions: 484143
Number of successful extensions: 1543
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1525
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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