Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_F24
         (840 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    24   2.0  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   6.1  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   6.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   6.1  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   8.1  
M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee homeobox-...    22   8.1  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   8.1  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +2

Query: 125 RTLSSTISPXKALGESQRLLLAYGGQEFEDNRISSENWPEFKPKTPFGQ--MPVLEIDGK 298
           R + S++SP   L E+  L        F++  I  +   EF+ +T  G+    V  +DG 
Sbjct: 31  RKVGSSVSPVVELTENNGLYTLKTTSPFKNTEIKFKLGEEFEEETVDGRKVKSVCTLDGN 90

Query: 299 QYAQ 310
           +  Q
Sbjct: 91  KLIQ 94


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 812 VFRYSGWFFYFVDKGTNXVFE 750
           V R   WF+Y+  KG + + E
Sbjct: 431 VNRQPVWFYYYTYKGAHSISE 451


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 13/59 (22%), Positives = 25/59 (42%)
 Frame = +3

Query: 186 WLTAARSSKTIAFHLKTGQNSNLRLRSVKCQCWKSTASSTLRALPSAGTSAASTDSPGP 362
           WL    S+     +    ++     +S+ C+C+    ++TLR   S G+  A  +   P
Sbjct: 49  WLGYCNSAINPCIYALFSKDFRFAFKSIICKCFCKRRTNTLRR-GSDGSQLAMRNDRSP 106


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 13/59 (22%), Positives = 25/59 (42%)
 Frame = +3

Query: 186 WLTAARSSKTIAFHLKTGQNSNLRLRSVKCQCWKSTASSTLRALPSAGTSAASTDSPGP 362
           WL    S+     +    ++     +S+ C+C+    ++TLR   S G+  A  +   P
Sbjct: 497 WLGYCNSAINPCIYALFSKDFRFAFKSIICKCFCKRRTNTLRR-GSDGSQLAMRNDRSP 554


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 812 VFRYSGWFFYFVDKGTNXVFE 750
           V R   WF+Y+  KG + + E
Sbjct: 431 VNRQPVWFYYYTYKGAHSISE 451


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 163 RREPEAAAGLRRP 201
           RREPEA  G  RP
Sbjct: 117 RREPEAEPGNNRP 129



 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 163 RREPEAAAGLRRP 201
           RREPEA  G  RP
Sbjct: 143 RREPEAEPGNNRP 155


>M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H17. ).
          Length = 79

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 239 PEFKPKTPFGQMPVLEIDGK 298
           P  KP+TPF    +L ++ K
Sbjct: 8   PNRKPRTPFTTQQLLSLEKK 27


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 91  NYSLLHNNPTMPNVKFYY 144
           ++ L HN+   PN+  YY
Sbjct: 302 HWQLPHNSTNPPNILLYY 319


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,352
Number of Sequences: 438
Number of extensions: 3573
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)