Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_F21
         (787 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    26   1.1  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   4.6  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   4.6  
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    24   6.1  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   8.1  

>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = +2

Query: 527 RTYQQTINPPLRKNGEELPLERRPCITYLDCIIKGAVECELPEYYIEELKKIPH---NGQ 697
           R  ++ +   L K+G E+  E    + YL+C+I   +    P   I  +   P+   NG+
Sbjct: 327 RKARKCVRSTLAKHGNEMTYEAIKDMYYLECVIHETLRLYPPVASIHRMTSQPYQLPNGE 386

Query: 698 I 700
           +
Sbjct: 387 V 387


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = -2

Query: 549 LIVC*YVRH*TETPSEVITFTDLAKYQFVSTPSCLSNDGK-S*SCSLH 409
           L  C Y  + T T + +  FT+ A  +   +PS LS  G    SC +H
Sbjct: 377 LHACFYPYYSTTTLNRIARFTNRAPSKEDLSPSSLSGTGPFGGSCQIH 424


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = -2

Query: 549 LIVC*YVRH*TETPSEVITFTDLAKYQFVSTPSCLSNDGK-S*SCSLH 409
           L  C Y  + T T + +  FT+ A  +   +PS LS  G    SC +H
Sbjct: 377 LHACFYPYYSTTTLNRIARFTNRAPSKEDLSPSSLSGTGPFGGSCQIH 424


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 519 TETPSEVITFTDLAKYQFV 463
           TE P E +TF ++A   FV
Sbjct: 281 TENPEEALTFNEVAAQAFV 299


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 428 LDHVVSILLPKHGHVQW 378
           L+H+VS L P+H  + W
Sbjct: 379 LEHIVSDLFPQHPPLVW 395


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,693
Number of Sequences: 2352
Number of extensions: 15187
Number of successful extensions: 40
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)