Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_F21
         (787 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28928-6|AAA68338.1|  188|Caenorhabditis elegans Hypothetical pr...    71   9e-13
AC025715-3|AAU87815.1|  534|Caenorhabditis elegans Hypothetical ...    29   2.9  
AL023835-7|CAA19482.1|  175|Caenorhabditis elegans Hypothetical ...    29   3.8  
M77697-3|AAA27898.3|  616|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical pr...    28   8.7  

>U28928-6|AAA68338.1|  188|Caenorhabditis elegans Hypothetical
           protein C44B7.7 protein.
          Length = 188

 Score = 70.9 bits (166), Expect = 9e-13
 Identities = 53/145 (36%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
 Frame = +2

Query: 314 NHQLDFIKYSEHWRGASATIIPTEHAHVWGAIWRLHDQDLPSLDRQEGVDTNWYFAKSVN 493
           N +L+F  YSE W+GA ATI   E   VWG +W++ ++   SLD QE      Y    V 
Sbjct: 55  NFRLEFANYSERWQGALATIKEAEGKEVWGCVWKMPNEYSDSLDEQE----FGYHRLMVP 110

Query: 494 VMTSDGVSVQCRTYQQTINPPLRKNGEELPLERRPCITYLDCIIKGAVECELPEYYIEEL 673
           V T  GV + CRTYQ +    L+ +    P+   P   Y   I +GA E +LP  YI++L
Sbjct: 111 VQTPKGV-ITCRTYQFS---DLKAD----PMAPSP--HYKLVITEGAKENKLPADYIQKL 160

Query: 674 KKIPHNGQIASA----KMLEKLNSQ 736
           + I  NG   +      +L KLN++
Sbjct: 161 EAIEDNGFAGAVDVDIPLLAKLNAK 185



 Score = 33.1 bits (72), Expect = 0.23
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = +3

Query: 207 FLYFAYGSNLFKKRIRINNPTAEFLGVGRLD 299
           F YFA+GSNL   RIR     AE+   G+LD
Sbjct: 24  FYYFAFGSNLLGDRIRYRQKGAEYDCNGKLD 54


>AC025715-3|AAU87815.1|  534|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.5 protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/69 (26%), Positives = 28/69 (40%)
 Frame = +2

Query: 431 LPSLDRQEGVDTNWYFAKSVNVMTSDGVSVQCRTYQQTINPPLRKNGEELPLERRPCITY 610
           +P   + +GVD  W+    +       V V       TI+ PL       P++R  CI Y
Sbjct: 51  MPPQPQYDGVDRGWFMTLDLLAALPLSVFVLTNYVPNTIDRPLLLTYLNDPVKRHLCIGY 110

Query: 611 LDCIIKGAV 637
           L   I+  +
Sbjct: 111 LPDSIRDPI 119


>AL023835-7|CAA19482.1|  175|Caenorhabditis elegans Hypothetical
           protein Y37A1B.7 protein.
          Length = 175

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 605 TYLDCIIKGAVECELPEYYIEELKKIP-HNGQIASAKMLEKL 727
           TY++  +K + EC+LP  ++  ++ IP  N  +     LEKL
Sbjct: 125 TYVNMYMKRSSECKLPIAHLSSIEMIPADNSSLKRRAKLEKL 166


>M77697-3|AAA27898.3|  616|Caenorhabditis elegans Hypothetical
           protein B0303.4 protein.
          Length = 616

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +2

Query: 461 DTNWYFAKSVNVMT-SDGVSVQCRTYQQTINPPLRKNGEELPLERRP 598
           D+ +  A ++ ++   D  S+  RTY+  + PP  ++G     E RP
Sbjct: 144 DSQYAAAAAIAILARGDDASLMSRTYRPQLRPPTERSGNTRVDESRP 190


>U23176-6|AAC46718.1| 1374|Caenorhabditis elegans Hypothetical protein
            F21H12.6 protein.
          Length = 1374

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +2

Query: 368  TIIPTEHAHVWGAIWRLHDQDLPSLDRQEGVDTNWYFAKSVNVMTSDGVSV 520
            TI+PT  + + G    L D DL  +D+ E +    YF    +   + G+S+
Sbjct: 1019 TIVPTSGSFLAGTFSALKDSDLSDVDKSEVI----YFLSEYSTRPTKGLSM 1065


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,594,076
Number of Sequences: 27780
Number of extensions: 348316
Number of successful extensions: 664
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)