Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_F18
         (811 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...   102   3e-22
L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...    94   1e-19
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr...    28   6.9  
AF016451-12|AAB65994.1|  317|Caenorhabditis elegans Hypothetical...    28   6.9  
AC025727-10|AAK66029.1|  707|Caenorhabditis elegans Hypothetical...    28   6.9  
Z70718-11|CAA94680.1|  590|Caenorhabditis elegans Hypothetical p...    28   9.1  
Z68301-10|CAA92629.1|  590|Caenorhabditis elegans Hypothetical p...    28   9.1  

>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score =  102 bits (245), Expect = 3e-22
 Identities = 63/152 (41%), Positives = 76/152 (50%)
 Frame = +3

Query: 351 NTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLEXXXXXXXXXXXXEKPAAAST 530
           N E    V  L  E+  L K +DDL +LV  LQ+++ TL               PAAA  
Sbjct: 72  NKEGGEDVSKLREEHSALAKKVDDLASLVAELQLQLSTLRQGQTSSVAAPAAA-PAAAKE 130

Query: 531 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAAYNAKKAKKPVLIAKSNIILDVKPWDDE 710
                                        RLAAY AKKA K   IAKS++ILDVKPWDDE
Sbjct: 131 EAAGDDDFDLFGSEDEEEDEEKKKVVEE-RLAAYAAKKATKAGPIAKSSVILDVKPWDDE 189

Query: 711 TDMAALEQAVRSIXTDGLLWGAAKLXPLAYGI 806
           TD+  +E+ VRSI  DGL+WG AKL P+ YGI
Sbjct: 190 TDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGI 221


>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 43/63 (68%), Positives = 50/63 (79%)
 Frame = +3

Query: 618 RLAAYNAKKAKKPVLIAKSNIILDVKPWDDETDMAALEQAVRSIXTDGLLWGAAKLXPLA 797
           RLAAY  KKAKK   IAKS++ILDVKPWDDETD+  +E+ VRSI  DGL+WG AKL P+ 
Sbjct: 109 RLAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIG 168

Query: 798 YGI 806
           YGI
Sbjct: 169 YGI 171


>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
           protein C08H9.2 protein.
          Length = 1220

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = +3

Query: 345 VPNTELSTKVISLENENKDLKKAIDDLRNLVISLQ 449
           +PN E ++  I +E + + +KKA+ ++R +V  ++
Sbjct: 454 IPNEETNSDEIVVEGKKEGVKKAVTEIRAIVTKIE 488


>AF016451-12|AAB65994.1|  317|Caenorhabditis elegans Hypothetical
           protein C03A7.13 protein.
          Length = 317

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 10/29 (34%), Positives = 21/29 (72%)
 Frame = -1

Query: 121 FELYLNTIKTLVHTIKLNFYVNKVNRANL 35
           F L+L+ + TLV+T  + F++N + +++L
Sbjct: 8   FILFLSLVSTLVNTSNVVFFINAIGKSHL 36


>AC025727-10|AAK66029.1|  707|Caenorhabditis elegans Hypothetical
           protein Y73E7A.8 protein.
          Length = 707

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 10/45 (22%), Positives = 26/45 (57%)
 Frame = +3

Query: 330 ATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVET 464
           A + G+  + +  + + ++ +  +L   I+DLR+L+  +  R+E+
Sbjct: 635 ARIFGIKTSSIPEETLKIQTKKSELTDEINDLRDLMEQMDERIES 679


>Z70718-11|CAA94680.1|  590|Caenorhabditis elegans Hypothetical
           protein W01B6.9 protein.
          Length = 590

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 16/65 (24%), Positives = 35/65 (53%)
 Frame = +3

Query: 273 EVAKARQHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQV 452
           ++ KA+ +++ +L     +     +  +E   K+    +EN+ ++K +DDL+N  I LQ 
Sbjct: 285 DIRKAKDYLEQNLHVKQHMEKELAMVKSEQEEKI----SENEKVQKMVDDLKN-KIELQK 339

Query: 453 RVETL 467
           ++  L
Sbjct: 340 QIHGL 344


>Z68301-10|CAA92629.1|  590|Caenorhabditis elegans Hypothetical
           protein W01B6.9 protein.
          Length = 590

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 16/65 (24%), Positives = 35/65 (53%)
 Frame = +3

Query: 273 EVAKARQHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQV 452
           ++ KA+ +++ +L     +     +  +E   K+    +EN+ ++K +DDL+N  I LQ 
Sbjct: 285 DIRKAKDYLEQNLHVKQHMEKELAMVKSEQEEKI----SENEKVQKMVDDLKN-KIELQK 339

Query: 453 RVETL 467
           ++  L
Sbjct: 340 QIHGL 344


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,422,052
Number of Sequences: 27780
Number of extensions: 277917
Number of successful extensions: 681
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)