Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_F13
         (741 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24I06 Cluster: Putative uncharacterized protein; n=1; ...    39   0.11 
UniRef50_Q94GM8 Cluster: Putative uncharacterized protein OSJNBb...    36   0.79 
UniRef50_Q20760 Cluster: Putative uncharacterized protein; n=2; ...    35   2.4  
UniRef50_Q0E4A0 Cluster: Os02g0129000 protein; n=9; Oryza sativa...    34   3.2  
UniRef50_Q4C725 Cluster: Putative uncharacterized protein; n=8; ...    33   9.7  
UniRef50_A3UNY4 Cluster: Zinc protease; n=6; Vibrionales|Rep: Zi...    33   9.7  
UniRef50_Q8I471 Cluster: 50S ribosomal subunit protein L28, puta...    33   9.7  

>UniRef50_Q24I06 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 943

 Score = 39.1 bits (87), Expect = 0.11
 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
 Frame = +2

Query: 77  GVINASPKVNDVHXKQQNCENSPQGHVFNEAQVIGTWHPQQHKS-KKTYAFGDSECVQLT 253
           G ++ S + N+ + KQQ C  S Q  V NE+QV  + +  + KS    Y        + +
Sbjct: 105 GALSRSIEENE-YKKQQKCGQSNQQSVLNESQVGKSKNISKQKSFLNDYKSSQQTLTKSS 163

Query: 254 SVNEQERNELKEMIGNYVDKMKWEN 328
             +EQ+ +++K  I N +D +K +N
Sbjct: 164 KKDEQQHSKVKFSIDNQIDSIKIKN 188


>UniRef50_Q94GM8 Cluster: Putative uncharacterized protein
           OSJNBb0052C09.3; n=2; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBb0052C09.3 - Oryza sativa subsp. japonica (Rice)
          Length = 643

 Score = 36.3 bits (80), Expect = 0.79
 Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
 Frame = +2

Query: 74  VGVINASPKVNDVHXKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGD-SECVQL 250
           V V    P     H +Q+N   + Q HV +E +   T H   HK+K+T+   D  + +++
Sbjct: 490 VKVYGDGPLQEICHVEQENIVMNSQSHVQDEDKTPPTKHATAHKNKRTFGLNDHGKQMEI 549

Query: 251 TSVNEQERNELKEMIGNYVD 310
               +Q+ N++  +  N ++
Sbjct: 550 ICAKKQQCNKMDFITDNSME 569


>UniRef50_Q20760 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 740

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = +1

Query: 235 RMCSINFGQRTGKKRIKRNDRELRRQNEMGELNSENANT 351
           R+ SI+FG   GKK +KR   + + + EM E+N +N NT
Sbjct: 594 RILSIDFG---GKKSLKRKMEDEQMEKEMAEMNDQNDNT 629


>UniRef50_Q0E4A0 Cluster: Os02g0129000 protein; n=9; Oryza
           sativa|Rep: Os02g0129000 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 750

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = +2

Query: 74  VGVINASPKVNDVHXKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGD-SECVQL 250
           V V    P     H +Q+N   + Q H  +E +   T H   HK+K+T+   D  + +++
Sbjct: 575 VKVYGDGPLQEICHVEQENIVMNSQSHAQDEDKTPPTKHATAHKNKRTFGLNDHGKQMEI 634

Query: 251 TSVNEQERNELKEMIGNYVD 310
               EQ+ +++  +  N ++
Sbjct: 635 ICAKEQQCSKMDFITDNSME 654


>UniRef50_Q4C725 Cluster: Putative uncharacterized protein; n=8;
           Cyanobacteria|Rep: Putative uncharacterized protein -
           Crocosphaera watsonii
          Length = 320

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +2

Query: 293 IGNYV--DKMKWENLTLRMQIPCPSDKHNVTKDYYLERLEGDGFYRT 427
           + NYV  DK+ WEN      +    +K+  T  YY E +  D  YRT
Sbjct: 138 VDNYVFLDKISWENFNESCHLKEQVEKYKKTFGYYPESVHVDKIYRT 184


>UniRef50_A3UNY4 Cluster: Zinc protease; n=6; Vibrionales|Rep: Zinc
           protease - Vibrio splendidus 12B01
          Length = 926

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 20/79 (25%), Positives = 35/79 (44%)
 Frame = +2

Query: 89  ASPKVNDVHXKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGDSECVQLTSVNEQ 268
           ASP     +   QN   +   HV  +++ + T   ++ KS     FG     QL  V + 
Sbjct: 641 ASPTGQFAYAMNQNTYQADSDHVLLDSKSVETVSVEEIKSVHQQLFGQFRNNQLVIVGDI 700

Query: 269 ERNELKEMIGNYVDKMKWE 325
           + +ELK ++  Y+  +  E
Sbjct: 701 DPSELKPLVRQYLASIPLE 719


>UniRef50_Q8I471 Cluster: 50S ribosomal subunit protein L28,
           putative; n=6; Plasmodium|Rep: 50S ribosomal subunit
           protein L28, putative - Plasmodium falciparum (isolate
           3D7)
          Length = 302

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 23/103 (22%), Positives = 45/103 (43%)
 Frame = +1

Query: 37  PQRRCXLIVLLGSGSXKRVSESQRCTRQAAKL*KFSARPRLQRSPGYWHMAPATTQIKEN 216
           P RRC ++  + + + +++S+S   T +  +L   + R   +    +  M  +   +K  
Sbjct: 166 PIRRCAILGKMDNWNARKISKSGVRTHRIQRLNLINKRIFFEEENRFIKMKVSAKGLK-T 224

Query: 217 LRIRGLRMCSINFGQRTGKKRIKRNDRELRRQNEMGELNSENA 345
           ++  GL  C   F     KK+        RR+ +  ELN  N+
Sbjct: 225 IKKYGLAYCIKKFNLDFSKKKYDAGYSSRRRKKKTQELNQTNS 267


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,558,272
Number of Sequences: 1657284
Number of extensions: 14735654
Number of successful extensions: 36517
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 35171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36503
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)