Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_F13
         (741 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118502-1|AAM49871.1|  529|Drosophila melanogaster LD09783p pro...    29   5.0  
AE014134-908|AAF52239.3| 2267|Drosophila melanogaster CG14023-PA...    29   5.0  
DQ138908-1|ABA86514.1| 1412|Drosophila melanogaster CG11156 prot...    29   6.6  
BT010007-1|AAQ22476.1| 1425|Drosophila melanogaster RE28166p pro...    29   6.6  
AF257463-1|AAG27544.1| 1425|Drosophila melanogaster BRCT-domain ...    29   6.6  
AE014298-1949|AAF48306.1| 1425|Drosophila melanogaster CG11156-P...    29   6.6  
AY058441-1|AAL13670.1|  459|Drosophila melanogaster GH22016p pro...    29   8.8  
AE014134-3238|AAF53891.1|  459|Drosophila melanogaster CG10949-P...    29   8.8  

>AY118502-1|AAM49871.1|  529|Drosophila melanogaster LD09783p
           protein.
          Length = 529

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = +3

Query: 120 SSKTVKILRKATSSTKPRLLA----HGTRNNTNQRKLTHSGTPN 239
           +S TVK L +A+S+  PR++     H   NN  +R+ +  G+ N
Sbjct: 203 ASTTVKSLSRASSTASPRVVTPTPNHNNNNNKRRRQESECGSSN 246


>AE014134-908|AAF52239.3| 2267|Drosophila melanogaster CG14023-PA
            protein.
          Length = 2267

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = +3

Query: 120  SSKTVKILRKATSSTKPRLLA----HGTRNNTNQRKLTHSGTPN 239
            +S TVK L +A+S+  PR++     H   NN  +R+ +  G+ N
Sbjct: 1941 ASTTVKSLSRASSTASPRVVTPTPNHNNNNNKRRRQESECGSSN 1984


>DQ138908-1|ABA86514.1| 1412|Drosophila melanogaster CG11156
           protein.
          Length = 1412

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +2

Query: 161 NEAQVIGTWHPQQHKSKKTYAFGDSECVQLTSVNEQERNELKEMI 295
           N  QV+    P+Q  +KK  AF D  CV L+    +ER +L  ++
Sbjct: 371 NYQQVLAEIEPRQ--AKKAGAFLDGCCVYLSGFRSEEREKLNRVL 413


>BT010007-1|AAQ22476.1| 1425|Drosophila melanogaster RE28166p
           protein.
          Length = 1425

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +2

Query: 161 NEAQVIGTWHPQQHKSKKTYAFGDSECVQLTSVNEQERNELKEMI 295
           N  QV+    P+Q  +KK  AF D  CV L+    +ER +L  ++
Sbjct: 378 NYQQVLAEIEPRQ--AKKAGAFLDGCCVYLSGFRSEEREKLNRVL 420


>AF257463-1|AAG27544.1| 1425|Drosophila melanogaster BRCT-domain
           protein MUS101 protein.
          Length = 1425

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +2

Query: 161 NEAQVIGTWHPQQHKSKKTYAFGDSECVQLTSVNEQERNELKEMI 295
           N  QV+    P+Q  +KK  AF D  CV L+    +ER +L  ++
Sbjct: 378 NYQQVLAEIEPRQ--AKKAGAFLDGCCVYLSGFRSEEREKLNRVL 420


>AE014298-1949|AAF48306.1| 1425|Drosophila melanogaster CG11156-PA
           protein.
          Length = 1425

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +2

Query: 161 NEAQVIGTWHPQQHKSKKTYAFGDSECVQLTSVNEQERNELKEMI 295
           N  QV+    P+Q  +KK  AF D  CV L+    +ER +L  ++
Sbjct: 378 NYQQVLAEIEPRQ--AKKAGAFLDGCCVYLSGFRSEEREKLNRVL 420


>AY058441-1|AAL13670.1|  459|Drosophila melanogaster GH22016p
           protein.
          Length = 459

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = +1

Query: 136 KFSARPRLQRSPGYWHMAPATTQIKENLR---IRGLRMCSINFGQRTGKKRIKRNDRELR 306
           +F  RP     P YW M P    +K++ +    R   +  + F  R  KKR K +  + R
Sbjct: 66  RFQERPD---EPTYWDMFPRLLFLKDHYKQGLARNESLDGMRFEPRERKKRTKVDMEQER 122

Query: 307 RQNEMGELNSEN 342
           R+ +  E +S++
Sbjct: 123 RRKDEEEEDSQD 134


>AE014134-3238|AAF53891.1|  459|Drosophila melanogaster CG10949-PA
           protein.
          Length = 459

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = +1

Query: 136 KFSARPRLQRSPGYWHMAPATTQIKENLR---IRGLRMCSINFGQRTGKKRIKRNDRELR 306
           +F  RP     P YW M P    +K++ +    R   +  + F  R  KKR K +  + R
Sbjct: 66  RFQERPD---EPTYWDMFPRLLFLKDHYKQGLARNESLDGMRFEPRERKKRTKVDMEQER 122

Query: 307 RQNEMGELNSEN 342
           R+ +  E +S++
Sbjct: 123 RRKDEEEEDSQD 134


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,352,758
Number of Sequences: 53049
Number of extensions: 697084
Number of successful extensions: 1716
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1716
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)