Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_F12
         (913 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   3.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   5.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.6  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 367 LIFPVSRECY*DCASIMQGHT 305
           L+FP+ +EC  D    ++ HT
Sbjct: 141 LMFPLMQECVDDLRRFLEDHT 161


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +2

Query: 644 VHHEVKLLYSSGYSLYKIKNFSLAIHLFNKAVRILHKC 757
           VH+E+  L     S+Y  +NF   +  F+  +   + C
Sbjct: 217 VHNELCNLCQVANSIYGFQNFLFVLSTFSICITQFYYC 254


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 11   RLIKNPTINRKFCVTKFKMCTVTLENGLDL 100
            RL+ NP+  R+F             +GLDL
Sbjct: 1913 RLVNNPSARRRFIAHVVDFIETNNFDGLDL 1942



 Score = 21.8 bits (44), Expect = 7.6
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -1

Query: 532  WNTHFSIHYFV*K 494
            +NT+F+IHY++ K
Sbjct: 2042 FNTNFTIHYWIEK 2054


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,737
Number of Sequences: 336
Number of extensions: 4644
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25444518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)