Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_F12
(913 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0280 - 17256524-17256733,17256838-17256958,17257318-172574... 43 3e-04
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482... 42 9e-04
04_03_0532 - 16824394-16824447,16824545-16824665,16824748-168248... 40 0.003
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333... 40 0.004
01_06_1316 + 36245368-36245507,36247229-36247315,36248334-362484... 37 0.026
01_06_1791 - 39907362-39907453,39907682-39907753,39907941-399080... 36 0.059
02_05_0823 - 32036445-32036546,32036867-32036919,32037513-320375... 34 0.18
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 33 0.24
03_03_0065 + 14192725-14192813,14193004-14193088,14193971-141940... 32 0.73
05_02_0158 + 7184344-7184595 30 2.2
08_01_0047 - 328895-329404,329492-329821,330253-330626,330712-33... 29 5.1
02_05_1062 - 33834305-33834694,33835190-33835333,33835466-338355... 29 5.1
02_05_0025 - 25165438-25165708,25165807-25166048,25166191-251662... 28 9.0
>02_03_0280 -
17256524-17256733,17256838-17256958,17257318-17257445,
17257603-17257671,17257757-17257882,17257970-17258235,
17258341-17258535,17258614-17258694,17258729-17258851,
17258941-17259201,17260044-17260130,17260260-17260578
Length = 661
Score = 43.2 bits (97), Expect = 3e-04
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Frame = +2
Query: 281 KKILETGGGMPLHD-GCTVSIAFSGYWENELQPFDVMSLNNPMTVDLKDSGLLPGLDIAV 457
KK+++ G G D G V + ++G + + + P L ++ G D+ +
Sbjct: 87 KKLVKEGEGWERPDAGDEVQVHYTGTLLDGTKFDSSRDRDAPFKFTLGQGQVIKGWDLGI 146
Query: 458 RSMLVGEISLFLFSYKVMYGEMGIPPRIKPKSDCVFYIKLV 580
++M GE ++F ++ YGE G PP I P + F ++L+
Sbjct: 147 KTMKKGENAIFTIPPELAYGEDGSPPVIPPNATLQFDVELI 187
Score = 32.7 bits (71), Expect = 0.42
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 4/172 (2%)
Frame = +2
Query: 275 VIKKILETGGGMPLHDGCT-VSIAFSGYWEN-ELQPFDVMSLNNPMTVDLKDSGLLPGLD 448
++KKIL G G CT V + G E+ + + P + ++ GLD
Sbjct: 334 ILKKILHEGEGYERPSDCTLVRVKLIGKLEDGTIFVTRGHDGDEPFEFKTDEDQVVEGLD 393
Query: 449 IAVRSMLVGEISLFLFSYKVMYG--EMGIPPRIKPKSDCVFYIKLVKSMLTPKEGALNLN 622
AV SM GE++L + +G E + P + V+Y + S KE + ++
Sbjct: 394 KAVLSMKKGEVALVTIPPEYAFGSDETRQDLSVVPPNSTVYYEVELVSFDKEKE-SWDMK 452
Query: 623 EPNTFQRVHHEVKLLYSSGYSLYKIKNFSLAIHLFNKAVRILHKCRLADEED 778
E NT +++ K G + +K++ ++ A + KA+ + EE+
Sbjct: 453 E-NT-EKIEAAAK-KKDEGNAWFKMEKYARASKRYGKALNFIQYDSSFSEEE 501
>05_05_0095 -
22347552-22347696,22347988-22348094,22348114-22348236,
22348325-22348458,22348766-22348874
Length = 205
Score = 41.5 bits (93), Expect = 9e-04
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 332 VSIAFSGYWENELQPFDVMSLNNPM-TVDLKDSGLLPGLDIAVRSMLVGEISLFLFSYKV 508
V + + G + FD +N + + ++ ++ DIA+R+M VGE++ +
Sbjct: 35 VDVHYEGTLAENGEVFDTTHEDNSIFSFEIGQGAVIKAWDIALRTMKVGEVAKITCKPEY 94
Query: 509 MYGEMGIPPRIKPKS 553
YG G PP I PKS
Sbjct: 95 AYGSAGSPPEIPPKS 109
>04_03_0532 -
16824394-16824447,16824545-16824665,16824748-16824875,
16825457-16825603,16825682-16825807,16825895-16826160,
16826259-16826453,16826577-16826657,16826756-16826830,
16827270-16827530,16827633-16827719,16827844-16828060
Length = 585
Score = 39.9 bits (89), Expect = 0.003
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +2
Query: 281 KKILETGGGMPLHD-GCTVSIAFSGYWENELQPFDVMSLNNPMTVDLKDSGLLPGLDIAV 457
K++L+ G G + G V + ++G + + P L ++ G D +
Sbjct: 53 KRLLKEGEGWDRPESGDEVQVHYTGTLLDGTKFDSSRDRGTPFKFSLGQGEVIKGWDEGI 112
Query: 458 RSMLVGEISLFLFSYKVMYGEMGIPPRIKPKSDCVFYIKLV 580
++M GE ++F ++ YGE G PP I P + F ++L+
Sbjct: 113 KTMKKGEQAVFTVPPELAYGEAGSPPAIPPNATLRFDVELL 153
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +2
Query: 356 WENELQPFDVMSLNNPMTVDLKDSGLLPGLDIAVRSMLVGEISLFLFSYKVMYGEMGIP 532
+E L+ V+S ++ + +KD P L AV++M GE L + +GE G P
Sbjct: 191 YEARLEDGTVVSKSDGVEFAVKDGYFCPALSKAVKTMKKGEKVLLTVKPQYGFGEQGKP 249
>08_02_1322 +
26131395-26131599,26132382-26132468,26133119-26133372,
26133430-26133526,26133613-26133693,26133782-26133976,
26134093-26134182,26134296-26134471,26134565-26134687,
26134799-26134945,26135027-26135163,26135247-26135364,
26135462-26135518
Length = 588
Score = 39.5 bits (88), Expect = 0.004
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Frame = +2
Query: 281 KKILETGGGMPLHD-GCTVSIAFSGYWENELQPFDVMSLNNPMTVDLKDSGLLPGLDIAV 457
KK+L+ G G + G V + ++G + + P L ++ G D+ +
Sbjct: 49 KKLLKEGEGWETPEVGDEVEVHYTGTLLDGKKFDSSRDRGTPFKFKLGQGQVIKGWDLGI 108
Query: 458 RSMLVGEISLFLFSYKVMYGEMGIPPRIKPKSDCVFYIKLV 580
++M GE ++F + YGE G PP I + F ++L+
Sbjct: 109 KTMKKGENAVFTIPPDLAYGESGSPPTIPASATLQFDVELL 149
Score = 33.1 bits (72), Expect = 0.31
Identities = 35/170 (20%), Positives = 76/170 (44%), Gaps = 6/170 (3%)
Frame = +2
Query: 257 VDENHYVIKKILETGGGMPL-HDGCTVSIAFSGYWENELQPFDVMSLNNPMTVDLK--DS 427
+ ++ ++KK+L G G ++G V + +G ++ F + P + K +
Sbjct: 279 IGDDKKILKKVLTEGTGYERPNEGAVVKVKITGKLQDGTI-FTKKGHDEPEPFEFKTDEE 337
Query: 428 GLLPGLDIAVRSMLVGEISLFLFSYKVMYGEMGIPPR---IKPKSDCVFYIKLVKSMLTP 598
++ G+D AV +M GE++L + +G + P S ++ ++LV S +
Sbjct: 338 EVIDGIDRAVLNMKNGEVALVTIPPEYAFGSTESKQDLAVVPPNSTVIYEVELV-SFVKD 396
Query: 599 KEGALNLNEPNTFQRVHHEVKLLYSSGYSLYKIKNFSLAIHLFNKAVRIL 748
KE + +LN + + + G +L+K+ + A + KA + +
Sbjct: 397 KE-SWDLNNTEKIETAGAKKE----EGNALFKLGKYVRASKRYEKAAKFI 441
>01_06_1316 +
36245368-36245507,36247229-36247315,36248334-36248439,
36249028-36249204,36249296-36249375,36249432-36249440,
36249474-36249566,36249788-36249947
Length = 283
Score = 36.7 bits (81), Expect = 0.026
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 395 NNPMTVDLKDSGLLPGLDIAVRSMLVGEISLFLFSYKVMYGEMGIPPRIKPK 550
N+ + ++ + ++ DIAV++M VGE++ + YG G PP I P+
Sbjct: 146 NSVFSFEIGEGTVIKAWDIAVKTMKVGEVAKITCKPEYAYGAAGSPPEIPPE 197
>01_06_1791 -
39907362-39907453,39907682-39907753,39907941-39908045,
39908212-39908302,39908787-39908849,39909448-39909497,
39909632-39909716
Length = 185
Score = 35.5 bits (78), Expect = 0.059
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = +2
Query: 398 NPMTVDLKDSGLLPGLDIAVRSMLVGEISLFLFSYKVMYGEMGIPPRIKPKSDCVFYIKL 577
+P L + ++ G D + M VGE K+ YGE G PP+I + +F +L
Sbjct: 83 DPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPAKMGYGERGSPPKIPGGATLIFDTEL 142
Query: 578 VKSMLTPKEGALNLNEPNTFQR 643
+ GA N +E + +
Sbjct: 143 IAVNGKTTGGASNKSEKSALSQ 164
>02_05_0823 -
32036445-32036546,32036867-32036919,32037513-32037574,
32037804-32037837,32038144-32038231
Length = 112
Score = 33.9 bits (74), Expect = 0.18
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Frame = +2
Query: 281 KKILETGGGMPLHDGCTVSIAFSGYWENELQPFDVMSLNN----PMTVDLKDSGLLPGLD 448
K IL+ G G G V++ +G+ ++ S + P + ++ ++ G D
Sbjct: 5 KTILKAGTGPKPVKGQKVTVHCTGFGKDNDLAKKFWSTKDAGQEPFSFNIGQGSVIKGWD 64
Query: 449 IAVRSMLVGEISLFLFSYKVMYGEMGIPP-RIKPKSDCVFYIKLVKS 586
V +M VGE++ + YG G P I+P S VF I+++ +
Sbjct: 65 EGVMTMQVGEVARIQCTPDYAYGASGFPAWGIRPNSVLVFEIEVLSA 111
>09_04_0633 -
19123930-19124009,19124240-19124344,19124453-19124543,
19124647-19124709,19126318-19126368,19126878-19126962,
19127102-19127283,19128493-19128582
Length = 248
Score = 33.5 bits (73), Expect = 0.24
Identities = 22/88 (25%), Positives = 35/88 (39%)
Frame = +2
Query: 317 HDGCTVSIAFSGYWENELQPFDVMSLNNPMTVDLKDSGLLPGLDIAVRSMLVGEISLFLF 496
H G V + + G + +P+ +L ++ G D + M VGE
Sbjct: 147 HKGDRVKVHYRGKLTDGTDFDSSYERGDPIEFELGTGQVIKGWDQGILGMCVGEKRKLKI 206
Query: 497 SYKVMYGEMGIPPRIKPKSDCVFYIKLV 580
K+ YG G PP I + +F +LV
Sbjct: 207 PSKLGYGAQGSPPTIPGGATLIFDTELV 234
>03_03_0065 +
14192725-14192813,14193004-14193088,14193971-14194040,
14194730-14194827,14194931-14195101,14196192-14196224,
14196762-14196820,14197143-14197190,14197399-14197480,
14198317-14198475,14199036-14199093,14199801-14199949,
14200403-14200503,14200574-14200643,14201088-14201147,
14201883-14201939,14202247-14202315,14202485-14202562,
14202996-14203097,14203203-14203274,14203361-14203648
Length = 665
Score = 31.9 bits (69), Expect = 0.73
Identities = 41/195 (21%), Positives = 77/195 (39%), Gaps = 4/195 (2%)
Frame = +2
Query: 311 PLHDGCTVSIAFSGYWENELQP--FDVMSLNNPMTVDL-KDSGLLP-GLDIAVRSMLVGE 478
PLHD + + + G +E + +D N+ ++ GL+P G ++ VR ML GE
Sbjct: 325 PLHDSL-LRVHYKGMLLDEPKSIFYDTRVDNHGEPLEFCSGEGLVPEGFEMCVRLMLPGE 383
Query: 479 ISLFLFSYKVMYGEMGIPPRIKPKSDCVFYIKLVKSMLTPKEGALNLNEPNTFQRVHHEV 658
S+ Y + P P+ V + + PK+ TFQ + +
Sbjct: 384 KSIVTCPPDFAYDKFPRLPANVPEGAHVQWEIELLGFEMPKDWT-----GFTFQEIMDDA 438
Query: 659 KLLYSSGYSLYKIKNFSLAIHLFNKAVRILHKCRLADEEDXXXXXXXXXXXXXXXXXXXX 838
+ + ++G L+K F LA + K +R + D+++
Sbjct: 439 EKIKTTGNRLFKEGKFELAKAKYEKVLREYNHVHPQDDDEGKIFANSRSSLHLNVAACYQ 498
Query: 839 KINKPLKTCIACNEL 883
K+ + K+ CN++
Sbjct: 499 KMGEYRKSIDTCNKV 513
>05_02_0158 + 7184344-7184595
Length = 83
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 398 NPMTVDLKDSGLLPGLDIAVRSMLVGE-ISLFLFSYKVMYGEMGIPPRIKPKSDCVFYIK 574
+P +LK++GLLP + R G ++ FLFS V + +PPR + Y++
Sbjct: 21 SPCPQNLKEAGLLPPSSSSSRCRGGGRPLASFLFSPDVAESDSLLPPRRATTVESFIYVE 80
Query: 575 L 577
L
Sbjct: 81 L 81
>08_01_0047 -
328895-329404,329492-329821,330253-330626,330712-330937,
331026-331475
Length = 629
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = -2
Query: 498 ENKNSDISPTSIDLTAISSPGSKPLSLRSTVI---GLFKLITSNG 373
EN+ + +PT+IDL A +S SKP +++ GL + IT+ G
Sbjct: 508 ENEEVNRAPTTIDLDAETSSASKPKKAKTSESEDDGLIRAITNVG 552
>02_05_1062 -
33834305-33834694,33835190-33835333,33835466-33835516,
33836098-33836262,33836566-33836670,33836729-33836869
Length = 331
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 134 INEIYEENDDNDTTESKVFKTIDILGEPVKNFEVLKNELIPVDENHY 274
+N +E T + V+ +DI +P N +LKN +I ++ + Y
Sbjct: 42 LNMTIQELIVQKTGDGDVYDCVDIYKQPAMNHPLLKNHIIQMEPSSY 88
>02_05_0025 -
25165438-25165708,25165807-25166048,25166191-25166222,
25167174-25167231,25167331-25167438
Length = 236
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 269 HYVIKKILETGGGMPLHDGCTV-SIAFSGYWENELQPFDVMSLNNPM 406
HY + K++E GG + +G + F+ Y NEL P LN+ +
Sbjct: 22 HYCLAKVVEEEGGGTVQEGKPLLDKVFTAYHVNELWPTKTDILNSAL 68
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,737,780
Number of Sequences: 37544
Number of extensions: 399293
Number of successful extensions: 1008
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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