Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_F06
         (816 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    25   2.1  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     25   2.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.8  

>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 531 LFTFMTRVHYHDPGDGVWGEH 593
           +F+F   + Y  P   VWGEH
Sbjct: 163 IFSFFNTIVYCIPAGWVWGEH 183


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +3

Query: 396 YPDYYTNACCS-HPLYIDEKPEEIITAARRR 485
           YP Y T A    HP Y   +P+  ITA+  R
Sbjct: 178 YPSYPTEANFQPHPYYPKYEPDAYITASTER 208


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 815  YFXRFGELFDAVQVVPPEFQSVAADHVEPRRYRTLQGWKERIKL 684
            Y   +G L   ++V+PP+F ++A      R + T    +E IKL
Sbjct: 1879 YSETYGHL---IEVLPPQFHALAKTTSRTRPFLTGGNTQEEIKL 1919


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 862,825
Number of Sequences: 2352
Number of extensions: 17957
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)