Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_F01
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   2.8  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   2.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.8  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   4.8  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   4.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   6.4  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   6.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   6.4  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   8.4  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   8.4  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   8.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.4  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 232 PENAAYYGNRSACYMMLCMYKKAL 303
           P N  YY + + CY  L M  K L
Sbjct: 34  PTNQKYYPSLAKCYACLLMVVKIL 57


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 458 SPLTHSTPPNSVARRTACSPFNRSPNAIQHFAARMYPLVN 339
           S  T +    S +  +  SP + S +A    AARMYP V+
Sbjct: 26  SATTEAPAAYSSSSPSGSSPQHSSSSASTSPAARMYPYVS 65


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -1

Query: 458 SPLTHSTPPNSVARRTACSPFNRSPNAIQHFAARMYPLVN 339
           S  T +    S +  +  SP + S +A    AARMYP V+
Sbjct: 26  SATTEAPAAYSSSSPSGSSPQHSSSSASTSPAARMYPYVS 65


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 731 TNKRLNIFNKYC 766
           TNK+LN  NK C
Sbjct: 495 TNKQLNTLNKIC 506


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 731 TNKRLNIFNKYC 766
           TNK+LN  NK C
Sbjct: 220 TNKQLNTLNKIC 231


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 458 SPLTHSTPPNSVARRTACS 402
           SPL HS  P + +R T  S
Sbjct: 115 SPLFHSAAPRTASRETKSS 133


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 169 NNYHCLFFLQPGSPGFWV 116
           NN + +  L+  +PGFW+
Sbjct: 651 NNGYVVLRLRANNPGFWL 668


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 302 LKMHRKLYHWIQHSPKDT 355
           L    K+Y+ IQHSP+ +
Sbjct: 12  LGQQNKMYNVIQHSPQQS 29


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/35 (25%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 683 QRLYTSGDYVCILKTETNKRLNIFNK-YCVSIXII 784
           +R++ S   +C L    +K + +FN+ + VS+ ++
Sbjct: 217 RRVFISFSKICYLHQHLSKSVKLFNEVFGVSLLVL 251


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/35 (25%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 683 QRLYTSGDYVCILKTETNKRLNIFNK-YCVSIXII 784
           +R++ S   +C L    +K + +FN+ + VS+ ++
Sbjct: 235 RRVFISFSKICYLHQHLSKSVKLFNEVFGVSLLVL 269


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 246 CCIFWAQFNGFIIHGQCS 193
           C +FW  +NG     QCS
Sbjct: 108 CDVFWNCWNGEASRYQCS 125


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 246 CCIFWAQFNGFIIHGQCS 193
           C +FW  +NG     QCS
Sbjct: 108 CDVFWNCWNGEASRYQCS 125


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 623 DAARKPRRLLMIYYDLIVRIQRLYTSGD 706
           DAA K  RL+  Y++ ++   +   SG+
Sbjct: 29  DAALKSERLMKSYFECLLGTGKCTPSGE 56


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 644 RLLMIYYDLIVRIQRLYTSGDYVCIL 721
           R+  +   LI+R  ++  SG Y+C++
Sbjct: 284 RVKQVAGTLIIREAKVEDSGKYLCVV 309


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 169 NNYHCLFFLQPGSPGFWV 116
           NN + +F  +  +PG+W+
Sbjct: 651 NNGYVIFRFRADNPGYWL 668


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,745
Number of Sequences: 336
Number of extensions: 3789
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)