Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_F01
(785 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 82 8e-17
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 70 3e-13
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 67 2e-12
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 56 6e-09
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 56 6e-09
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 54 2e-08
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 38 0.002
SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 33 0.035
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 33 0.046
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 32 0.081
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 28 1.3
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 28 1.7
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 27 3.0
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 27 4.0
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 27 4.0
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 26 5.3
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 26 5.3
SPBC16E9.08 |mcp4|mug101|sequence orphan|Schizosaccharomyces pom... 26 7.0
SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos... 25 9.3
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 25 9.3
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 82.2 bits (194), Expect = 8e-17
Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 2/221 (0%)
Frame = +1
Query: 121 KSPESLAEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPEN--AAYYGNRSACYMMLCMYK 294
+ P LAE++K GN YK K Y A+ Y EAI L ++ A YY NR+A YM + ++
Sbjct: 17 QEPAELAEKQKAIGNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATYMQIGEFE 76
Query: 295 KALEDAQKAVSLDPTFTKGYIRAAKCCIALGDLLNGEQAVRRATELGGVECVSGELRALE 474
AL DA+++ + P K R + L +LN + + + G AL
Sbjct: 77 LALCDAKQSDRIKPDVPKTQSRIRQAYEGL-SILNEAEVYLKNKQAG---------LALN 126
Query: 475 TLKRLHEDAQRALDANDYRRVVFCMDRCLDYSPSCTKCKLTKAECLALLGRCQEAQEIAN 654
L RL QR +D+ P + L KA+ AQ+IA+
Sbjct: 127 ALDRL----QRRIDSTT--------------QPPMSWMYL-KAQVYIFQNDMDRAQKIAH 167
Query: 655 DLLRLDSQDTEAIYVRGLCLYFEDRDEQAFKHFQQVLRLNP 777
D+LRL+ ++ EA+ +RG +Y+ + +A HFQ+ L+L+P
Sbjct: 168 DVLRLNPKNVEALVLRGKVMYYSGENAKAITHFQEALKLDP 208
Score = 54.0 bits (124), Expect = 2e-08
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Frame = +1
Query: 142 EEKKDSGNYLYKFKNYKGALAMYDEAIKLCPEN----AAYYGNRSACYMMLCMYKKALED 309
E K+ GN L++ NY+ A Y EA+++ P+N A Y NR+ + L ++AL D
Sbjct: 224 ENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVLLRLKRPEEALSD 283
Query: 310 AQKAVSLDPTFTKGYIRAAKCCIALGDLLNGEQAVRRATELGGVEC-VSGELRALE 474
+ A+++D ++ KG AK AL + V+ A EL + + ELR L+
Sbjct: 284 SDNALAIDSSYLKGLKVRAKAHEALEKWEEAVRDVQSAIELDASDANLRQELRRLQ 339
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 70.1 bits (164), Expect = 3e-13
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Frame = +1
Query: 139 AEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQK 318
AEE + GN L+K ++ A+ Y E K P + +GNR+A Y+ + + + D K
Sbjct: 399 AEESRVKGNELFKSGDFANAIKEYTEMTKRAPSDPRGFGNRAAAYLKVMAPAECIRDCNK 458
Query: 319 AVSLDPTFTKGYIRAAKCCIALGDLLNGEQAVRRATELGGVECVSGE-LRALET 477
A+ LDP F K Y+R A+ L D A A+E+ E +G+ LR +E+
Sbjct: 459 AIELDPNFAKAYVRKAQALFMLKDYNKCIDACNEASEVDRREPNTGKNLREIES 512
Score = 67.3 bits (157), Expect = 2e-12
Identities = 41/100 (41%), Positives = 50/100 (50%)
Frame = +1
Query: 136 LAEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQ 315
+AEE K GN + K+YK A+ + +AI L N Y NRSACY Y AL+DA
Sbjct: 1 MAEELKAKGNAAFSKKDYKTAIDYFTQAIGLDERNHILYSNRSACYASEKDYADALKDAT 60
Query: 316 KAVSLDPTFTKGYIRAAKCCIALGDLLNGEQAVRRATELG 435
K L P + KG+ R LGDL A R A E G
Sbjct: 61 KCTELKPDWAKGWSRKGAALHGLGDL----DAARSAYEEG 96
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 67.3 bits (157), Expect = 2e-12
Identities = 33/97 (34%), Positives = 54/97 (55%)
Frame = +1
Query: 139 AEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQK 318
AE+ K GN K+Y+ AL +Y +AI++ P + YY NR+A Y L ++ A+EDA
Sbjct: 83 AEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALT 142
Query: 319 AVSLDPTFTKGYIRAAKCCIALGDLLNGEQAVRRATE 429
+SLDP + + R + ++LGD A ++ +
Sbjct: 143 CLSLDPHHARAFGRLGRAKLSLGDAAAAADAYKKGLD 179
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 56.0 bits (129), Expect = 6e-09
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Frame = +1
Query: 127 PESLAEEKKDSGNYLYKFKNYKGALAMYDEAI-KLCPEN---AAYYGNRSACYMMLCMYK 294
P +A+ ++ GN + K YK A Y +A+ + C + A Y NR+AC ++ Y+
Sbjct: 60 PHEVAQNFREHGNECFASKRYKDAEEFYTKALAQKCGDKDIEIACYSNRAACNLLFENYR 119
Query: 295 KALEDAQKAVSLDPTFTKGYIRAAKCCIALGDLLNGEQAVR 417
+ L D + + D T K Y R+AK +AL ++ +R
Sbjct: 120 QVLNDCAQVLQRDSTHAKAYYRSAKALVALKRYDEAKECIR 160
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 56.0 bits (129), Expect = 6e-09
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = +1
Query: 136 LAEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQ 315
LA E K GN Y K Y A+ Y +AI C + ++ NR+ACY + +++ ++D
Sbjct: 150 LAAELKTLGNKAYGQKEYANAIDYYTQAIT-CSHDPIFFSNRAACYAAIGDFEQVIKDTS 208
Query: 316 KAVSLDPTFTKGYIRAAKCCIALGDL 393
+A+SLD ++ K R + LG L
Sbjct: 209 EALSLDSSYVKALNRRSAAYEQLGKL 234
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 54.0 bits (124), Expect = 2e-08
Identities = 30/82 (36%), Positives = 42/82 (51%)
Frame = +1
Query: 139 AEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQK 318
A E K+ N K + A+ +Y +AI+L NA Y NRS ++ Y A+ DA K
Sbjct: 5 ALELKNEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDASK 64
Query: 319 AVSLDPTFTKGYIRAAKCCIAL 384
A+ DP + K Y R A IA+
Sbjct: 65 AIECDPEYAKAYFRRATAHIAI 86
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1389
Score = 37.5 bits (83), Expect = 0.002
Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 11/181 (6%)
Frame = +1
Query: 172 YKFKNYKGALAMYDEAIKL---CPENAAYYGNRS----ACYMMLCMYKKALEDAQKA--- 321
Y F N G L +A++ C + RS A Y LC+ +E A A
Sbjct: 930 YVFWNMLGVLFSQTKAVRSAQHCYIQSLLLNERSSGVWANYGALCIQNHDVECANAAFTR 989
Query: 322 -VSLDPTFTKGYIRAAKCCIALGDLLNGEQAVRRATELGGVECVSGELRALETLKRLHED 498
+S+DP ++ ++ A C IA+G + Q + A E+ + +T+
Sbjct: 990 SISIDPDNSQAWLGKAYCSIAVGSIRKAVQIIHHAFEISSGKMPDVNYWYADTMLHAVNT 1049
Query: 499 AQRALDANDYRRVVFCMDRCLDYSPSCTKCKLTKAECLALLGRCQEAQEIANDLLRLDSQ 678
D + + R L +P+ T KA L LG ++ A L L Q
Sbjct: 1050 EDFVTTDGDIWSATYAIKRYLGENPTDTFAYYIKASLLEHLGETTDSVPSAIRLCELLEQ 1109
Query: 679 D 681
+
Sbjct: 1110 E 1110
>SPCC338.07c |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 729
Score = 33.5 bits (73), Expect = 0.035
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +1
Query: 547 MDRCLDYSPSCTKCKLTKAECLALLGRCQEAQEIANDLLRLDSQDTEAIYVRGLCLYFED 726
+D +D++P+ + +TKA G Q A EI + +LD QD ++ G C +
Sbjct: 403 VDLAIDHTPTLVELFMTKARISKHKGELQTAMEIMDHARKLDLQDR---FINGKCAKYML 459
Query: 727 RDEQ 738
R+++
Sbjct: 460 RNDE 463
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 33.1 bits (72), Expect = 0.046
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +1
Query: 133 SLAEEKKDSGNYLYKFKNYKGALAMYDEAIKLCP----ENAAYYGNRSACYMMLCMYKKA 300
+L EE++ +GN L++ ++ A+ + ++ P + NRS CY + K
Sbjct: 410 ALVEEQQSTGNELFRKGDFSQAIEEFTNSLSQLPAKHTKRVPLLSNRSLCYQKVGDLKTC 469
Query: 301 LEDAQKAVSL 330
L+D + V +
Sbjct: 470 LQDVDELVDI 479
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 32.3 bits (70), Expect = 0.081
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 121 KSPESLAEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMML 282
+S ES+ +YL KF + ++ + D A+ CP NA+ SA +++L
Sbjct: 201 RSSESVENASNLISDYLKKFGKPRQSIELPDIAVDACPSNASRIQTLSAAWLLL 254
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +1
Query: 181 KNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLDP 336
K+YK AL YD A KL +++ ++ ++L + KAL + ++ ++ P
Sbjct: 547 KDYKKALDFYDRACKLDEKSSLARFKKAKVLILLHDHDKALVELEQLKAIAP 598
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/85 (17%), Positives = 38/85 (44%)
Frame = +1
Query: 523 DYRRVVFCMDRCLDYSPSCTKCKLTKAECLALLGRCQEAQEIANDLLRLDSQDTEAIYVR 702
++ + + C++R + P+ + + ++++ +R++ + A Y
Sbjct: 446 EHSQALKCINRAIQLDPTFEYAYTLQGHEHSANEEYEKSKTSFRKAIRVNVRHYNAWYGL 505
Query: 703 GLCLYFEDRDEQAFKHFQQVLRLNP 777
G+ R++QA HFQ+ +NP
Sbjct: 506 GMVYLKTGRNDQADFHFQRAAEINP 530
Score = 25.8 bits (54), Expect = 7.0
Identities = 18/85 (21%), Positives = 33/85 (38%)
Frame = +1
Query: 523 DYRRVVFCMDRCLDYSPSCTKCKLTKAECLALLGRCQEAQEIANDLLRLDSQDTEAIYVR 702
DY + + D SPS K + L L + +A++ L + E+ +
Sbjct: 378 DYEKSEEVFQKLRDLSPSRVKDMEVFSTALWHLQKSVPLSYLAHETLETNPYSPESWCIL 437
Query: 703 GLCLYFEDRDEQAFKHFQQVLRLNP 777
C + QA K + ++L+P
Sbjct: 438 ANCFSLQREHSQALKCINRAIQLDP 462
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = +1
Query: 208 YDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLDPTFTKGYIRAAKCCIALG 387
+ A ++ P N+ Y YKKAL+ +A LD + + AK I L
Sbjct: 522 FQRAAEINPNNSVLITCIGMIYERCKDYKKALDFYDRACKLDEKSSLARFKKAKVLILLH 581
Query: 388 D 390
D
Sbjct: 582 D 582
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 403 EQAVRRATELGGVECVSGELRALETLKR--LHEDAQRALDANDYRRVVFCMDRCLDYS 570
E+ + AT G VE ++ + R + L +R D DY+R V C C++ S
Sbjct: 434 EKKSKHATSNGTVETLNTKFRLIHVFANCELMSSHRRFPDWGDYQREVTCCRNCVERS 491
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 27.1 bits (57), Expect = 3.0
Identities = 20/84 (23%), Positives = 33/84 (39%)
Frame = +1
Query: 514 DANDYRRVVFCMDRCLDYSPSCTKCKLTKAECLALLGRCQEAQEIANDLLRLDSQDTEAI 693
+ DY + C L SP+ A A LG Q + N LL+LDS + E
Sbjct: 88 ETKDYNNSLKCYQNALAISPNNESLWYDAAYLQAQLGLYQPLFDNWNRLLQLDSSNLEYR 147
Query: 694 YVRGLCLYFEDRDEQAFKHFQQVL 765
L + +++ + Q ++
Sbjct: 148 LCFTLSAFLSGNYKESLEQIQYLI 171
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/51 (21%), Positives = 25/51 (49%)
Frame = +1
Query: 181 KNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLD 333
K+Y +L Y A+ + P N + + + + L +Y+ ++ + + LD
Sbjct: 90 KDYNNSLKCYQNALAISPNNESLWYDAAYLQAQLGLYQPLFDNWNRLLQLD 140
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 26.6 bits (56), Expect = 4.0
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 4/92 (4%)
Frame = +1
Query: 166 YLYKFKNYKGALAMYDEAIKLCPENA----AYYGNRSACYMMLCMYKKALEDAQKAVSLD 333
Y+Y KNY+G + + + I+ ++ YY A Y + +KA+ QKA + D
Sbjct: 298 YVYSKKNYEGCIKLAENVIQNSFSSSLIADGYYWMGRA-YHQMGNNEKAMASYQKAKAAD 356
Query: 334 PTFTKGYIRAAKCCIALGDLLNGEQAVRRATE 429
+ + I DL + + R E
Sbjct: 357 DRHLLSSVGIGQIQILQNDLTSAKLTFERIAE 388
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 4.0
Identities = 18/76 (23%), Positives = 31/76 (40%)
Frame = +1
Query: 160 GNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMMLCMYKKALEDAQKAVSLDPT 339
G +Y K Y+ + + +A++ P N + A +A+ +AVSL P
Sbjct: 445 GIIMYMLKEYERSADCFRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRAVSLQPQ 504
Query: 340 FTKGYIRAAKCCIALG 387
+ + A I LG
Sbjct: 505 YVRVRSNMAVSNINLG 520
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 121 KSPESLAEEKKDSGNYLYKFKNYKGALA 204
++ E L EEK D + LY+F+ Y+ +A
Sbjct: 265 RNVEILKEEKNDLESKLYRFEEYRDKVA 292
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 118 PKSPESLA-EEKKDSGNYLYKFKNYKGALAMYDEAI 222
P S +S A E+ GN Y KNY+ A+ Y +A+
Sbjct: 24 PSSSDSRAIEQLVTQGNMAYAQKNYEEAVDKYGQAL 59
>SPBC16E9.08 |mcp4|mug101|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 336 NIHQRIHTGCEMLYCVRRSIK 398
+IH R E +YC+RR IK
Sbjct: 124 HIHNRRLCWAEFIYCIRRGIK 144
>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 467
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 146 KKKTVVIIYISLKITKEHWPCMMKPLNC 229
KK VV + L + E W C + P NC
Sbjct: 124 KKLPVVYCHHGLLMNSEVWVCNVDPRNC 151
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 25.4 bits (53), Expect = 9.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 488 NRLSVSNARNSPLTHSTPPNSVAR 417
N LS + NS +T TPPNS+ R
Sbjct: 818 NILSFLSFANSQVTSYTPPNSIDR 841
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,023,286
Number of Sequences: 5004
Number of extensions: 59648
Number of successful extensions: 219
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 381366860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -