Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_E24
(866 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71188-1|CAA94918.1| 270|Homo sapiens histone RNA hairpin-bindi... 99 1e-20
U75679-1|AAB97091.1| 270|Homo sapiens histone stem-loop binding... 99 1e-20
BT007433-1|AAP36101.1| 270|Homo sapiens stem-loop (histone) bin... 99 1e-20
BC015703-1|AAH15703.1| 270|Homo sapiens stem-loop (histone) bin... 99 1e-20
BC014908-1|AAH14908.1| 270|Homo sapiens stem-loop (histone) bin... 99 1e-20
X66397-1|CAA47021.1| 2349|Homo sapiens Tpr protein. 35 0.44
X63105-1|CAA44819.1| 726|Homo sapiens Tpr protein. 35 0.44
U69668-1|AAB48030.1| 2363|Homo sapiens Tpr protein. 35 0.44
BC094764-1|AAH94764.1| 692|Homo sapiens TPR protein protein. 35 0.44
BC016514-1|AAH16514.1| 687|Homo sapiens TPR protein protein. 35 0.44
AL596220-1|CAI13119.1| 2363|Homo sapiens translocated promoter r... 35 0.44
AL133553-3|CAI17859.1| 2363|Homo sapiens translocated promoter r... 35 0.44
BC048120-1|AAH48120.3| 652|Homo sapiens chromosome 12 open read... 32 3.1
BC038754-1|AAH38754.2| 422|Homo sapiens C12orf40 protein protein. 32 3.1
AF172271-1|AAF03789.1| 1268|Homo sapiens Traf2 and NCK interacti... 31 5.4
AF172269-1|AAF03787.1| 1323|Homo sapiens Traf2 and NCK interacti... 31 5.4
AF172268-1|AAF03786.1| 1276|Homo sapiens Traf2 and NCK interacti... 31 5.4
AF172265-1|AAF03783.1| 1331|Homo sapiens Traf2 and NCK interacti... 31 5.4
BC150274-1|AAI50275.1| 1981|Homo sapiens CASP8AP2 protein protein. 30 9.5
BC132830-1|AAI32831.1| 1982|Homo sapiens CASP8 associated protei... 30 9.5
BC132828-1|AAI32829.1| 1982|Homo sapiens CASP8 associated protei... 30 9.5
AL353692-6|CAI16239.1| 1964|Homo sapiens CASP8 associated protei... 30 9.5
AF164678-1|AAD45537.2| 1982|Homo sapiens FLASH homolog RIP25 pro... 30 9.5
AF154415-1|AAF03367.1| 1982|Homo sapiens FLASH protein. 30 9.5
AB037736-1|BAA92553.2| 1981|Homo sapiens KIAA1315 protein protein. 30 9.5
>Z71188-1|CAA94918.1| 270|Homo sapiens histone RNA hairpin-binding
protein protein.
Length = 270
Score = 99 bits (238), Expect = 1e-20
Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Frame = +1
Query: 427 LEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRR 606
+E +E ++ + + + RK +++ ++ ++ETD VL RR
Sbjct: 79 VEEDEMRTRVNKEMARYKRKLLINDFGRERKSSSGSSDSKESMSTVPADFETDESVLMRR 138
Query: 607 QKQIDYGKNTVGYQNYVQQIPLNKRTKEL-PKTPDKYLKYSRRSWDMLIKLWRKNLHEFD 783
QKQI+YGKNT+ Y Y++++P + R + PKTP+K+ KYSRRSWD IKLW+ LH +D
Sbjct: 139 QKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQIKLWKVALHFWD 198
Query: 784 PNXGE 798
P E
Sbjct: 199 PPAEE 203
>U75679-1|AAB97091.1| 270|Homo sapiens histone stem-loop binding
protein protein.
Length = 270
Score = 99 bits (238), Expect = 1e-20
Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Frame = +1
Query: 427 LEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRR 606
+E +E ++ + + + RK +++ ++ ++ETD VL RR
Sbjct: 79 VEEDEMRTRVNKEMARYKRKLLINDFGRERKSSSGSSDSKESMSTVPADFETDESVLMRR 138
Query: 607 QKQIDYGKNTVGYQNYVQQIPLNKRTKEL-PKTPDKYLKYSRRSWDMLIKLWRKNLHEFD 783
QKQI+YGKNT+ Y Y++++P + R + PKTP+K+ KYSRRSWD IKLW+ LH +D
Sbjct: 139 QKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQIKLWKVALHFWD 198
Query: 784 PNXGE 798
P E
Sbjct: 199 PPAEE 203
>BT007433-1|AAP36101.1| 270|Homo sapiens stem-loop (histone)
binding protein protein.
Length = 270
Score = 99 bits (238), Expect = 1e-20
Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Frame = +1
Query: 427 LEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRR 606
+E +E ++ + + + RK +++ ++ ++ETD VL RR
Sbjct: 79 VEEDEMRTRVNKEMARYKRKLLINDFGRERKSSSGSSDSKESMSTVPADFETDESVLMRR 138
Query: 607 QKQIDYGKNTVGYQNYVQQIPLNKRTKEL-PKTPDKYLKYSRRSWDMLIKLWRKNLHEFD 783
QKQI+YGKNT+ Y Y++++P + R + PKTP+K+ KYSRRSWD IKLW+ LH +D
Sbjct: 139 QKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQIKLWKVALHFWD 198
Query: 784 PNXGE 798
P E
Sbjct: 199 PPAEE 203
>BC015703-1|AAH15703.1| 270|Homo sapiens stem-loop (histone)
binding protein protein.
Length = 270
Score = 99 bits (238), Expect = 1e-20
Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Frame = +1
Query: 427 LEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRR 606
+E +E ++ + + + RK +++ ++ ++ETD VL RR
Sbjct: 79 VEEDEMRTRVNKEMARYKRKLLINDFGRERKSSSGSSDSKESMSTVPADFETDESVLMRR 138
Query: 607 QKQIDYGKNTVGYQNYVQQIPLNKRTKEL-PKTPDKYLKYSRRSWDMLIKLWRKNLHEFD 783
QKQI+YGKNT+ Y Y++++P + R + PKTP+K+ KYSRRSWD IKLW+ LH +D
Sbjct: 139 QKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQIKLWKVALHFWD 198
Query: 784 PNXGE 798
P E
Sbjct: 199 PPAEE 203
>BC014908-1|AAH14908.1| 270|Homo sapiens stem-loop (histone)
binding protein protein.
Length = 270
Score = 99 bits (238), Expect = 1e-20
Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Frame = +1
Query: 427 LEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRR 606
+E +E ++ + + + RK +++ ++ ++ETD VL RR
Sbjct: 79 VEEDEMRTRVNKEMARYKRKLLINDFGRERKSSSGSSDSKESMSTVPADFETDESVLMRR 138
Query: 607 QKQIDYGKNTVGYQNYVQQIPLNKRTKEL-PKTPDKYLKYSRRSWDMLIKLWRKNLHEFD 783
QKQI+YGKNT+ Y Y++++P + R + PKTP+K+ KYSRRSWD IKLW+ LH +D
Sbjct: 139 QKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQIKLWKVALHFWD 198
Query: 784 PNXGE 798
P E
Sbjct: 199 PPAEE 203
>X66397-1|CAA47021.1| 2349|Homo sapiens Tpr protein.
Length = 2349
Score = 34.7 bits (76), Expect = 0.44
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 418 KRRLEHEESEDKITVTDKSMNSRTHSGEDSKN-RKKLKSDVENEGNLVVKLVEYETDPEV 594
K LE E+ D I ++ + ED K +KLK +G L +KL E +
Sbjct: 117 KEELEAEK-RDLIRTNERLSQELEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVS 175
Query: 595 LQRRQKQIDYGKNTVGYQNYVQQIPLNKRTKEL 693
++ R+K+++ K + QN L +T EL
Sbjct: 176 VKYREKRLEQEKELLHSQNTWLNTELKTKTDEL 208
>X63105-1|CAA44819.1| 726|Homo sapiens Tpr protein.
Length = 726
Score = 34.7 bits (76), Expect = 0.44
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 418 KRRLEHEESEDKITVTDKSMNSRTHSGEDSKN-RKKLKSDVENEGNLVVKLVEYETDPEV 594
K LE E+ D I ++ + ED K +KLK +G L +KL E +
Sbjct: 117 KEELEAEK-RDLIRTNERLSQELEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVS 175
Query: 595 LQRRQKQIDYGKNTVGYQNYVQQIPLNKRTKEL 693
++ R+K+++ K + QN L +T EL
Sbjct: 176 VKYREKRLEQEKELLHSQNTWLNTELKTKTDEL 208
>U69668-1|AAB48030.1| 2363|Homo sapiens Tpr protein.
Length = 2363
Score = 34.7 bits (76), Expect = 0.44
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 418 KRRLEHEESEDKITVTDKSMNSRTHSGEDSKN-RKKLKSDVENEGNLVVKLVEYETDPEV 594
K LE E+ D I ++ + ED K +KLK +G L +KL E +
Sbjct: 117 KEELEAEK-RDLIRTNERLSQELEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVS 175
Query: 595 LQRRQKQIDYGKNTVGYQNYVQQIPLNKRTKEL 693
++ R+K+++ K + QN L +T EL
Sbjct: 176 VKYREKRLEQEKELLHSQNTWLNTELKTKTDEL 208
>BC094764-1|AAH94764.1| 692|Homo sapiens TPR protein protein.
Length = 692
Score = 34.7 bits (76), Expect = 0.44
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 418 KRRLEHEESEDKITVTDKSMNSRTHSGEDSKN-RKKLKSDVENEGNLVVKLVEYETDPEV 594
K LE E+ D I ++ + ED K +KLK +G L +KL E +
Sbjct: 117 KEELEAEK-RDLIRTNERLSQELEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVS 175
Query: 595 LQRRQKQIDYGKNTVGYQNYVQQIPLNKRTKEL 693
++ R+K+++ K + QN L +T EL
Sbjct: 176 VKYREKRLEQEKELLHSQNTWLNTELKTKTDEL 208
>BC016514-1|AAH16514.1| 687|Homo sapiens TPR protein protein.
Length = 687
Score = 34.7 bits (76), Expect = 0.44
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 418 KRRLEHEESEDKITVTDKSMNSRTHSGEDSKN-RKKLKSDVENEGNLVVKLVEYETDPEV 594
K LE E+ D I ++ + ED K +KLK +G L +KL E +
Sbjct: 117 KEELEAEK-RDLIRTNERLSQELEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVS 175
Query: 595 LQRRQKQIDYGKNTVGYQNYVQQIPLNKRTKEL 693
++ R+K+++ K + QN L +T EL
Sbjct: 176 VKYREKRLEQEKELLHSQNTWLNTELKTKTDEL 208
>AL596220-1|CAI13119.1| 2363|Homo sapiens translocated promoter
region (to activated MET oncogene) protein.
Length = 2363
Score = 34.7 bits (76), Expect = 0.44
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 418 KRRLEHEESEDKITVTDKSMNSRTHSGEDSKN-RKKLKSDVENEGNLVVKLVEYETDPEV 594
K LE E+ D I ++ + ED K +KLK +G L +KL E +
Sbjct: 117 KEELEAEK-RDLIRTNERLSQELEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVS 175
Query: 595 LQRRQKQIDYGKNTVGYQNYVQQIPLNKRTKEL 693
++ R+K+++ K + QN L +T EL
Sbjct: 176 VKYREKRLEQEKELLHSQNTWLNTELKTKTDEL 208
>AL133553-3|CAI17859.1| 2363|Homo sapiens translocated promoter
region (to activated MET oncogene) protein.
Length = 2363
Score = 34.7 bits (76), Expect = 0.44
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 418 KRRLEHEESEDKITVTDKSMNSRTHSGEDSKN-RKKLKSDVENEGNLVVKLVEYETDPEV 594
K LE E+ D I ++ + ED K +KLK +G L +KL E +
Sbjct: 117 KEELEAEK-RDLIRTNERLSQELEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVS 175
Query: 595 LQRRQKQIDYGKNTVGYQNYVQQIPLNKRTKEL 693
++ R+K+++ K + QN L +T EL
Sbjct: 176 VKYREKRLEQEKELLHSQNTWLNTELKTKTDEL 208
>BC048120-1|AAH48120.3| 652|Homo sapiens chromosome 12 open reading
frame 40 protein.
Length = 652
Score = 31.9 bits (69), Expect = 3.1
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +1
Query: 451 KITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQK-QIDYG 627
++T ++ ++N ++ + N+K + +NE N + E + P +R++K + DY
Sbjct: 354 ELTFSNSTLNKTSYPEKCQPNKKYQREYNKNERNDLSTSFENDYYPSSSERKEKFENDYQ 413
Query: 628 KNTVGYQNYVQQIPLNKRTKELPKTPDKYLKYSRRSWD 741
+ T Q +Q+ P N + P + L +S++SWD
Sbjct: 414 EKTP--QKSIQKYPAN----SMGNIPSEEL-HSKQSWD 444
>BC038754-1|AAH38754.2| 422|Homo sapiens C12orf40 protein protein.
Length = 422
Score = 31.9 bits (69), Expect = 3.1
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +1
Query: 451 KITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQK-QIDYG 627
++T ++ ++N ++ + N+K + +NE N + E + P +R++K + DY
Sbjct: 299 ELTFSNSTLNKTSYPEKCQPNKKYQREYNKNERNDLSTSFENDYYPSSSERKEKFENDYQ 358
Query: 628 KNTVGYQNYVQQIPLNKRTKELPKTPDKYLKYSRRSWD 741
+ T Q +Q+ P N + P + L +S++SWD
Sbjct: 359 EKTP--QKSIQKYPAN----SMGNIPSEEL-HSKQSWD 389
>AF172271-1|AAF03789.1| 1268|Homo sapiens Traf2 and NCK interacting
kinase, splice variant 8 protein.
Length = 1268
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +1
Query: 415 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEV 594
++RRLE ++ +K + R H E+ R++ + E+E K +E + E
Sbjct: 401 QRRRLEEQQRREKELRKQQEREQRRHY-EEQMRREEERRRAEHEQEYKRKQLEEQRQAER 459
Query: 595 LQRRQKQ 615
LQR+ KQ
Sbjct: 460 LQRQLKQ 466
>AF172269-1|AAF03787.1| 1323|Homo sapiens Traf2 and NCK interacting
kinase, splice variant 6 protein.
Length = 1323
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +1
Query: 415 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEV 594
++RRLE ++ +K + R H E+ R++ + E+E K +E + E
Sbjct: 401 QRRRLEEQQRREKELRKQQEREQRRHY-EEQMRREEERRRAEHEQEYKRKQLEEQRQAER 459
Query: 595 LQRRQKQ 615
LQR+ KQ
Sbjct: 460 LQRQLKQ 466
>AF172268-1|AAF03786.1| 1276|Homo sapiens Traf2 and NCK interacting
kinase, splice variant 5 protein.
Length = 1276
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +1
Query: 415 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEV 594
++RRLE ++ +K + R H E+ R++ + E+E K +E + E
Sbjct: 401 QRRRLEEQQRREKELRKQQEREQRRHY-EEQMRREEERRRAEHEQEYKRKQLEEQRQAER 459
Query: 595 LQRRQKQ 615
LQR+ KQ
Sbjct: 460 LQRQLKQ 466
>AF172265-1|AAF03783.1| 1331|Homo sapiens Traf2 and NCK interacting
kinase, splice variant 2 protein.
Length = 1331
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +1
Query: 415 KKRRLEHEESEDKITVTDKSMNSRTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEV 594
++RRLE ++ +K + R H E+ R++ + E+E K +E + E
Sbjct: 401 QRRRLEEQQRREKELRKQQEREQRRHY-EEQMRREEERRRAEHEQEYKRKQLEEQRQAER 459
Query: 595 LQRRQKQ 615
LQR+ KQ
Sbjct: 460 LQRQLKQ 466
>BC150274-1|AAI50275.1| 1981|Homo sapiens CASP8AP2 protein protein.
Length = 1981
Score = 30.3 bits (65), Expect = 9.5
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 484 RTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQKQIDYGKNTVGYQNYVQ- 660
R+HS DS++ KKL+ E N+ K V+ + D E + QK K+ ++ +
Sbjct: 330 RSHSRVDSQSDKKLERQSERSQNINRKEVKSQ-DKEERKVDQKPKSVVKDQDHWRRSERA 388
Query: 661 QIPLNKRTKELPKTPDKYLKYSRRSWDMLIKLWRKNLHEF 780
+P +K KY RR W+ + N H F
Sbjct: 389 SLPHSKNEITFSHNSSKYHLEERRGWEDCKRDKSVNSHSF 428
>BC132830-1|AAI32831.1| 1982|Homo sapiens CASP8 associated protein 2
protein.
Length = 1982
Score = 30.3 bits (65), Expect = 9.5
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 484 RTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQKQIDYGKNTVGYQNYVQ- 660
R+HS DS++ KKL+ E N+ K V+ + D E + QK K+ ++ +
Sbjct: 330 RSHSRVDSQSDKKLERQSERSQNINRKEVKSQ-DKEERKVDQKPKSVVKDQDHWRRSERA 388
Query: 661 QIPLNKRTKELPKTPDKYLKYSRRSWDMLIKLWRKNLHEF 780
+P +K KY RR W+ + N H F
Sbjct: 389 SLPHSKNEITFSHNSSKYHLEERRGWEDCKRDKSVNSHSF 428
>BC132828-1|AAI32829.1| 1982|Homo sapiens CASP8 associated protein 2
protein.
Length = 1982
Score = 30.3 bits (65), Expect = 9.5
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 484 RTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQKQIDYGKNTVGYQNYVQ- 660
R+HS DS++ KKL+ E N+ K V+ + D E + QK K+ ++ +
Sbjct: 330 RSHSRVDSQSDKKLERQSERSQNINRKEVKSQ-DKEERKVDQKPKSVVKDQDHWRRSERA 388
Query: 661 QIPLNKRTKELPKTPDKYLKYSRRSWDMLIKLWRKNLHEF 780
+P +K KY RR W+ + N H F
Sbjct: 389 SLPHSKNEITFSHNSSKYHLEERRGWEDCKRDKSVNSHSF 428
>AL353692-6|CAI16239.1| 1964|Homo sapiens CASP8 associated protein 2
protein.
Length = 1964
Score = 30.3 bits (65), Expect = 9.5
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 484 RTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQKQIDYGKNTVGYQNYVQ- 660
R+HS DS++ KKL+ E N+ K V+ + D E + QK K+ ++ +
Sbjct: 330 RSHSRVDSQSDKKLERQSERSQNINRKEVKSQ-DKEERKVDQKPKSVVKDQDHWRRSERA 388
Query: 661 QIPLNKRTKELPKTPDKYLKYSRRSWDMLIKLWRKNLHEF 780
+P +K KY RR W+ + N H F
Sbjct: 389 SLPHSKNEITFSHNSSKYHLEERRGWEDCKRDKSVNSHSF 428
>AF164678-1|AAD45537.2| 1982|Homo sapiens FLASH homolog RIP25
protein.
Length = 1982
Score = 30.3 bits (65), Expect = 9.5
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 484 RTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQKQIDYGKNTVGYQNYVQ- 660
R+HS DS++ KKL+ E N+ K V+ + D E + QK K+ ++ +
Sbjct: 330 RSHSRVDSQSDKKLERQSERSQNINRKEVKSQ-DKEERKVDQKPKSVVKDQDHWRRSERA 388
Query: 661 QIPLNKRTKELPKTPDKYLKYSRRSWDMLIKLWRKNLHEF 780
+P +K KY RR W+ + N H F
Sbjct: 389 SLPHSKNEITFSHNSSKYHLEERRGWEDCKRDKSVNSHSF 428
>AF154415-1|AAF03367.1| 1982|Homo sapiens FLASH protein.
Length = 1982
Score = 30.3 bits (65), Expect = 9.5
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 484 RTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQKQIDYGKNTVGYQNYVQ- 660
R+HS DS++ KKL+ E N+ K V+ + D E + QK K+ ++ +
Sbjct: 330 RSHSRVDSQSDKKLERQSERSQNINRKEVKSQ-DKEERKVDQKPKSVVKDQDHWRRSERA 388
Query: 661 QIPLNKRTKELPKTPDKYLKYSRRSWDMLIKLWRKNLHEF 780
+P +K KY RR W+ + N H F
Sbjct: 389 SLPHSKNEITFSHNSSKYHLEERRGWEDCKRDKSVNSHSF 428
>AB037736-1|BAA92553.2| 1981|Homo sapiens KIAA1315 protein protein.
Length = 1981
Score = 30.3 bits (65), Expect = 9.5
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 484 RTHSGEDSKNRKKLKSDVENEGNLVVKLVEYETDPEVLQRRQKQIDYGKNTVGYQNYVQ- 660
R+HS DS++ KKL+ E N+ K V+ + D E + QK K+ ++ +
Sbjct: 330 RSHSRVDSQSDKKLERQSERSQNINRKEVKSQ-DKEERKVDQKPKSVVKDQDHWRRSERA 388
Query: 661 QIPLNKRTKELPKTPDKYLKYSRRSWDMLIKLWRKNLHEF 780
+P +K KY RR W+ + N H F
Sbjct: 389 SLPHSKNEITFSHNSSKYHLEERRGWEDCKRDKSVNSHSF 428
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,986,534
Number of Sequences: 237096
Number of extensions: 1671755
Number of successful extensions: 3622
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3617
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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