Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_E18
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       26   0.20 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.4  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 105 CNLESYFRHFKLYTN*KIYVQFRFPIYYEITKP 7
           C + ++FR F LY +  + V      YY + KP
Sbjct: 111 CRIMAFFRMFGLYLSSFVLVCISMDRYYAVIKP 143


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 113 DVSVILKVTFDILNYTQIKKFMFNFVSQFITKLQN 9
           DV+   KVT +ILN     K     + QF  KL++
Sbjct: 503 DVAWRRKVTIEILNSLSATKLSKIILMQFGDKLES 537


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 113 DVSVILKVTFDILNYTQIKKFMFNFVSQFITKLQN 9
           DV+   KVT +ILN     K     + QF  KL++
Sbjct: 541 DVAWRRKVTIEILNSLSATKLSKIILMQFGDKLES 575


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,905
Number of Sequences: 438
Number of extensions: 2404
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)