Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_E16
         (902 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-141|AAF47417.1|  604|Drosophila melanogaster CG13886-PA...    44   4e-04
AY089285-1|AAL90023.1|  579|Drosophila melanogaster AT08308p pro...    33   0.41 
AE014296-3576|AAF51747.2|  579|Drosophila melanogaster CG7634-PA...    33   0.41 
AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-P...    33   0.71 
AE014298-2123|AAF48439.1|  689|Drosophila melanogaster CG6211-PA...    30   5.0  
AY075582-1|AAL68387.1|  841|Drosophila melanogaster SD08161p pro...    29   8.7  
AJ312282-1|CAC41644.1|  841|Drosophila melanogaster nuclear RNA ...    29   8.7  
AE014296-2758|AAF49447.3|  841|Drosophila melanogaster CG4118-PB...    29   8.7  
AE014296-2757|AAF49448.3|  841|Drosophila melanogaster CG4118-PA...    29   8.7  

>AE014296-141|AAF47417.1|  604|Drosophila melanogaster CG13886-PA
           protein.
          Length = 604

 Score = 43.6 bits (98), Expect = 4e-04
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
 Frame = +1

Query: 175 GTKMESHPLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMK---LTTSTLALEA 345
           G K    P + AH   RR+E  ++NHRY+EA++  +++   + DA K   L  S   L+ 
Sbjct: 389 GFKWNYLPKSKAHFHERRSERFIRNHRYEEAIKALETSLIYMQDAQKRVALPKSKEVLDT 448

Query: 346 ITLQHSYHLKQKDLIK 393
           +TL     L+Q ++ K
Sbjct: 449 LTLDFQRKLRQIEMRK 464


>AY089285-1|AAL90023.1|  579|Drosophila melanogaster AT08308p
           protein.
          Length = 579

 Score = 33.5 bits (73), Expect = 0.41
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +1

Query: 193 HPLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMK 315
           +P+  ++  H+ AE HLK+HR+DE   C  SA + + +A K
Sbjct: 452 YPIEKSYLLHQMAEIHLKSHRFDE---CCFSARKSIEEAKK 489


>AE014296-3576|AAF51747.2|  579|Drosophila melanogaster CG7634-PA
           protein.
          Length = 579

 Score = 33.5 bits (73), Expect = 0.41
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +1

Query: 193 HPLNLAHQQHRRAEAHLKNHRYDEAMQCHQSAAELLVDAMK 315
           +P+  ++  H+ AE HLK+HR+DE   C  SA + + +A K
Sbjct: 452 YPIEKSYLLHQMAEIHLKSHRFDE---CCFSARKSIEEAKK 489


>AE014134-2514|AAF53406.2| 1025|Drosophila melanogaster CG12636-PA
           protein.
          Length = 1025

 Score = 32.7 bits (71), Expect = 0.71
 Identities = 12/55 (21%), Positives = 31/55 (56%)
 Frame = +1

Query: 244 KNHRYDEAMQCHQSAAELLVDAMKLTTSTLALEAITLQHSYHLKQKDLIKYKKEQ 408
           ++H YD+A+  H+S     ++  ++T +T  ++  T+ H + +K    + Y+ ++
Sbjct: 387 RHHPYDDALTIHKSGIAYQINVTEVTENTKDIQVKTIDHIHVIKLSTKLLYELQR 441


>AE014298-2123|AAF48439.1|  689|Drosophila melanogaster CG6211-PA
           protein.
          Length = 689

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 214 QQHRRAEAHLKNHRYDEAMQCHQSAAELLVD 306
           +Q +R E    N R+DE MQ HQ  +EL V+
Sbjct: 621 EQSQRYELPHANQRFDEIMQEHQKQSELYVN 651


>AY075582-1|AAL68387.1|  841|Drosophila melanogaster SD08161p
           protein.
          Length = 841

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -2

Query: 127 AFI*IYMKEINNVNDNKSSFYFFLRNSIFTFTINWH 20
           AF+  Y++E  N     + + ++  NSIFT T N++
Sbjct: 588 AFLENYLREFENDEFRHNLYKYYSENSIFTLTCNYN 623


>AJ312282-1|CAC41644.1|  841|Drosophila melanogaster nuclear RNA
           export factor 2 (NXF2) protein.
          Length = 841

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -2

Query: 127 AFI*IYMKEINNVNDNKSSFYFFLRNSIFTFTINWH 20
           AF+  Y++E  N     + + ++  NSIFT T N++
Sbjct: 588 AFLENYLREFENDEFRHNLYKYYSENSIFTLTCNYN 623


>AE014296-2758|AAF49447.3|  841|Drosophila melanogaster CG4118-PB,
           isoform B protein.
          Length = 841

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -2

Query: 127 AFI*IYMKEINNVNDNKSSFYFFLRNSIFTFTINWH 20
           AF+  Y++E  N     + + ++  NSIFT T N++
Sbjct: 588 AFLENYLREFENDEFRHNLYKYYSENSIFTLTCNYN 623


>AE014296-2757|AAF49448.3|  841|Drosophila melanogaster CG4118-PA,
           isoform A protein.
          Length = 841

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -2

Query: 127 AFI*IYMKEINNVNDNKSSFYFFLRNSIFTFTINWH 20
           AF+  Y++E  N     + + ++  NSIFT T N++
Sbjct: 588 AFLENYLREFENDEFRHNLYKYYSENSIFTLTCNYN 623


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,942,757
Number of Sequences: 53049
Number of extensions: 483723
Number of successful extensions: 1617
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1605
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)