Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_E15
         (794 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92831-6|CAB07365.2|  355|Caenorhabditis elegans Hypothetical pr...    31   0.72 
Z92777-12|CAJ58496.1|  355|Caenorhabditis elegans Hypothetical p...    31   0.72 
L14331-8|AAA28100.1|  586|Caenorhabditis elegans C.elegans homeo...    31   0.72 
AF016670-6|AAB66103.2|  839|Caenorhabditis elegans Hypothetical ...    31   0.72 
U41534-6|AAB47598.1|  375|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z75547-13|CAO82070.1|   95|Caenorhabditis elegans Hypothetical p...    29   2.9  
Z75533-1|CAA99815.1|  423|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AF100663-2|AAC68981.2|  532|Caenorhabditis elegans Udp-glucurono...    29   3.8  
U61957-1|AAB03419.1|  238|Caenorhabditis elegans Hypothetical pr...    29   5.1  
AC087078-5|AAK66024.2|  191|Caenorhabditis elegans Hypothetical ...    29   5.1  
Z73102-16|CAA97417.1|  283|Caenorhabditis elegans Hypothetical p...    28   8.9  
Z46794-6|CAA86776.1|  416|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>Z92831-6|CAB07365.2|  355|Caenorhabditis elegans Hypothetical
           protein F22G12.1 protein.
          Length = 355

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
 Frame = +3

Query: 324 LEDLKR----DPDKYLNTSESIDDKSEAEMALIESQYQTVKKKGTEELGNVNNSIEDL 485
           +E+LKR    D  K  +  ESI  K E ++  IE Q + ++K+ TE+L N   ++  L
Sbjct: 79  IEELKRSHKNDKKKLESELESIKRKGEKDVREIEQQREALEKQRTEDLVNHQETMRKL 136


>Z92777-12|CAJ58496.1|  355|Caenorhabditis elegans Hypothetical
           protein F22G12.1 protein.
          Length = 355

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
 Frame = +3

Query: 324 LEDLKR----DPDKYLNTSESIDDKSEAEMALIESQYQTVKKKGTEELGNVNNSIEDL 485
           +E+LKR    D  K  +  ESI  K E ++  IE Q + ++K+ TE+L N   ++  L
Sbjct: 79  IEELKRSHKNDKKKLESELESIKRKGEKDVREIEQQREALEKQRTEDLVNHQETMRKL 136


>L14331-8|AAA28100.1|  586|Caenorhabditis elegans C.elegans homeobox
           protein 26 protein.
          Length = 586

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 207 QPSPMFAITSQHPLYPSNPVFYFCPVH 127
           QP P F     HP++P+NP+F+  P H
Sbjct: 299 QPPPQF-----HPIFPANPLFHMAPPH 320


>AF016670-6|AAB66103.2|  839|Caenorhabditis elegans Hypothetical
           protein K02F6.3 protein.
          Length = 839

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 19/89 (21%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
 Frame = +3

Query: 129 VQDRNKKLDCLDTEGVVKLLQTWDLVEFVDFVKEKQLDGRKIADVTE---GIVKLWRPQS 299
           ++D NK +  +  + +  +L+  +L+  ++ +K+K+ D    +D+ +    I        
Sbjct: 512 IRDTNKNMSII--KNMQDVLKRTNLITTLECLKDKKFDSSLASDLMKFGSNIRAFGVHAK 569

Query: 300 NAKKFIAFLEDLKRDPDKYLNTSESIDDK 386
           N K  I+FL+ + +  + Y +  +S+D+K
Sbjct: 570 NDKATISFLDQISKLQNLYFSVKKSLDEK 598


>U41534-6|AAB47598.1|  375|Caenorhabditis elegans Hypothetical
           protein C16A3.4 protein.
          Length = 375

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -3

Query: 429 LFDTG-SLSKPSQLQIYHRSIHLYSNIYLGRVLG 331
           LFD G SL+ PS  +I HR++H Y   YL  V G
Sbjct: 273 LFDDGWSLTLPSGAKIGHRNLHRYFKQYLRPVDG 306


>Z75547-13|CAO82070.1|   95|Caenorhabditis elegans Hypothetical
           protein R11D1.13 protein.
          Length = 95

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +3

Query: 222 VKEKQLDG-RKIADVTEGIVKLWRPQSNAKKFIAFLEDLKRDPDKYLNTSESIDDK 386
           + ++ +DG + + D    ++K+      AKK    ++ LK D D YL+   S DDK
Sbjct: 30  ISKETIDGVQSVIDEHSAMIKIANSNKRAKK--TEIDSLKADIDLYLDEHASDDDK 83


>Z75533-1|CAA99815.1|  423|Caenorhabditis elegans Hypothetical
           protein C54G4.2 protein.
          Length = 423

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 591 RSKKFFRLNSYEYPLFDLRSRLKQETTDKYYPMKRT 698
           RS+KFFR+NS  Y        L +E  D++   ++T
Sbjct: 288 RSEKFFRMNSVNYYTMSNLLTLSKEAIDRFAAQEQT 323


>AF100663-2|AAC68981.2|  532|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein19 protein.
          Length = 532

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
 Frame = +3

Query: 489 KKLVPVKSFLYRNQPKQINKAAPSY---LPMKPVSPKRSKKFFRLNSYEYPLFDLRSR 653
           +++VP  SF+  NQ   ++  AP++   +P+  +S K  KK  +L      + D+R +
Sbjct: 240 REVVPEASFIMTNQIPLLDFPAPTFDKIIPIGGLSVKTDKKSLKLEEKWSKILDIRKK 297


>U61957-1|AAB03419.1|  238|Caenorhabditis elegans Hypothetical
           protein AC7.3 protein.
          Length = 238

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 21/93 (22%), Positives = 44/93 (47%)
 Frame = +3

Query: 324 LEDLKRDPDKYLNTSESIDDKSEAEMALIESQYQTVKKKGTEELGNVNNSIEDLLKKLVP 503
           L DL  + +KY   + S D +   +M  I +++  +++     +     SI+    K + 
Sbjct: 122 LSDLAPELEKY-QKNRSTDPEQNQQMDKIMNRFTELQRLLKSMIQEGTASIQSQHLKAMR 180

Query: 504 VKSFLYRNQPKQINKAAPSYLPMKPVSPKRSKK 602
               LY+ Q +Q +++  S+  +KP    ++KK
Sbjct: 181 YSIELYQKQNEQWSRSFASFANLKPDVTVKAKK 213


>AC087078-5|AAK66024.2|  191|Caenorhabditis elegans Hypothetical
           protein Y34F4.5 protein.
          Length = 191

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 235 CFSLTKSTNSTKSHVCNNFTTPSVSKQSSFLFLSCTLIMTQLQQIYLKIL 86
           CF + K+T  +K H C +   P  S  SS+ F S  L  T + Q  + ++
Sbjct: 28  CFMVEKATADSKQHKC-HAVNPFSSMGSSYDFASFALYTTVVCQFMVALM 76


>Z73102-16|CAA97417.1|  283|Caenorhabditis elegans Hypothetical
           protein B0035.15 protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 22/90 (24%), Positives = 37/90 (41%)
 Frame = +3

Query: 240 DGRKIADVTEGIVKLWRPQSNAKKFIAFLEDLKRDPDKYLNTSESIDDKSEAEMALIESQ 419
           D R+I D  + + K  R  SN  KF+          D+Y    +   DK    +A +  +
Sbjct: 201 DERRILDEAKDVGKKIRHISNNTKFL----------DEYQRLEDEEKDKVREAIAQLRQE 250

Query: 420 YQTVKKKGTEELGNVNNSIEDLLKKLVPVK 509
                 K   +LG +  + ++ +KK V  K
Sbjct: 251 EHERLNKRLGQLGEIEKTAQEAMKKAVEEK 280


>Z46794-6|CAA86776.1|  416|Caenorhabditis elegans Hypothetical
           protein R06F6.6 protein.
          Length = 416

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +3

Query: 474 IEDLLKKLVPVKSFLYRNQPKQINKAAPSYLPMKPVSPK 590
           ++D L+ L+  ++ +   Q +  +K  PSY P+K  SP+
Sbjct: 59  VDDSLRLLLSAEALIALAQLQDASKILPSYEPVKDFSPQ 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,577,314
Number of Sequences: 27780
Number of extensions: 408011
Number of successful extensions: 1342
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)