Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P08_F_E14
         (913 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023697-1|AAY85097.1|   90|Drosophila melanogaster IP03424p pro...   170   3e-42
AE014297-859|AAF54327.1|   85|Drosophila melanogaster CG11985-PA...   167   1e-41
AY069304-1|AAL39449.1|  587|Drosophila melanogaster HL07962p pro...    30   5.1  
AE014298-1675|AAF48083.2|  587|Drosophila melanogaster CG1841-PB...    30   5.1  
AE014298-1674|AAN09296.1|  587|Drosophila melanogaster CG1841-PA...    30   5.1  

>BT023697-1|AAY85097.1|   90|Drosophila melanogaster IP03424p
           protein.
          Length = 90

 Score =  170 bits (413), Expect = 3e-42
 Identities = 75/87 (86%), Positives = 80/87 (91%)
 Frame = +3

Query: 117 NKMGEXYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVEN 296
           +KMGE YNIHSQLEHLQSKYIGTGHADTTK+EWL NQHRDS  SYMGH D+L+YFAI EN
Sbjct: 4   SKMGERYNIHSQLEHLQSKYIGTGHADTTKFEWLTNQHRDSLASYMGHYDILNYFAIAEN 63

Query: 297 ESKARVKFNLMERMLQPCGPPPEKPED 377
           ESKARV+FNLMERMLQPCGPPPEK ED
Sbjct: 64  ESKARVRFNLMERMLQPCGPPPEKLED 90


>AE014297-859|AAF54327.1|   85|Drosophila melanogaster CG11985-PA
           protein.
          Length = 85

 Score =  167 bits (407), Expect = 1e-41
 Identities = 74/85 (87%), Positives = 78/85 (91%)
 Frame = +3

Query: 123 MGEXYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 302
           MGE YNIHSQLEHLQSKYIGTGHADTTK+EWL NQHRDS  SYMGH D+L+YFAI ENES
Sbjct: 1   MGERYNIHSQLEHLQSKYIGTGHADTTKFEWLTNQHRDSLASYMGHYDILNYFAIAENES 60

Query: 303 KARVKFNLMERMLQPCGPPPEKPED 377
           KARV+FNLMERMLQPCGPPPEK ED
Sbjct: 61  KARVRFNLMERMLQPCGPPPEKLED 85


>AY069304-1|AAL39449.1|  587|Drosophila melanogaster HL07962p
           protein.
          Length = 587

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
 Frame = -3

Query: 569 KHILK--TMPVICSFYS**LSFWWYYLCLLKVIE--IKTNCSNLCHDKGFKENNK*ISLI 402
           KH+ K  T   + S+    LSF   +  L + ++  +K N   +   + F E +  I ++
Sbjct: 241 KHVAKAATSGYLVSWLQYTLSFTPTHNDLTETLKRFLKWNLEMVAESRDFVEMDPAILIL 300

Query: 401 LFLQSKCLI---FRLFGRWAAWLKHSFHQIEFYARFRFIFYDRKVTQQIRMTHVTAARVA 231
           L  Q+  ++   ++LF     WL H   Q+E      F+    +    IR   +T  +++
Sbjct: 301 LLQQNDLVVTSEYKLFDILQTWLLHRREQMEATGSGGFMELIEQTVSHIRFGMMTPRQLS 360

Query: 230 MLVHKPFI 207
            L+  P +
Sbjct: 361 HLLMDPLV 368


>AE014298-1675|AAF48083.2|  587|Drosophila melanogaster CG1841-PB,
           isoform B protein.
          Length = 587

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
 Frame = -3

Query: 569 KHILK--TMPVICSFYS**LSFWWYYLCLLKVIE--IKTNCSNLCHDKGFKENNK*ISLI 402
           KH+ K  T   + S+    LSF   +  L + ++  +K N   +   + F E +  I ++
Sbjct: 241 KHVAKAATSGYLVSWLQYTLSFTPTHNDLTETLKRFLKWNLEMVAESRDFVEMDPAILIL 300

Query: 401 LFLQSKCLI---FRLFGRWAAWLKHSFHQIEFYARFRFIFYDRKVTQQIRMTHVTAARVA 231
           L  Q+  ++   ++LF     WL H   Q+E      F+    +    IR   +T  +++
Sbjct: 301 LLQQNDLVVTSEYKLFDILQTWLLHRREQMEATGSGGFMELIEQTVSHIRFGMMTPRQLS 360

Query: 230 MLVHKPFI 207
            L+  P +
Sbjct: 361 HLLMDPLV 368


>AE014298-1674|AAN09296.1|  587|Drosophila melanogaster CG1841-PA,
           isoform A protein.
          Length = 587

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
 Frame = -3

Query: 569 KHILK--TMPVICSFYS**LSFWWYYLCLLKVIE--IKTNCSNLCHDKGFKENNK*ISLI 402
           KH+ K  T   + S+    LSF   +  L + ++  +K N   +   + F E +  I ++
Sbjct: 241 KHVAKAATSGYLVSWLQYTLSFTPTHNDLTETLKRFLKWNLEMVAESRDFVEMDPAILIL 300

Query: 401 LFLQSKCLI---FRLFGRWAAWLKHSFHQIEFYARFRFIFYDRKVTQQIRMTHVTAARVA 231
           L  Q+  ++   ++LF     WL H   Q+E      F+    +    IR   +T  +++
Sbjct: 301 LLQQNDLVVTSEYKLFDILQTWLLHRREQMEATGSGGFMELIEQTVSHIRFGMMTPRQLS 360

Query: 230 MLVHKPFI 207
            L+  P +
Sbjct: 361 HLLMDPLV 368


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,550,678
Number of Sequences: 53049
Number of extensions: 717487
Number of successful extensions: 1346
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)