Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P08_F_E09
(837 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74473-2|CAA98949.2| 319|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z81581-16|CAI46620.1| 656|Caenorhabditis elegans Hypothetical p... 29 3.1
Z81581-15|CAI46619.1| 729|Caenorhabditis elegans Hypothetical p... 29 3.1
Z81143-11|CAI46592.1| 656|Caenorhabditis elegans Hypothetical p... 29 3.1
Z81143-10|CAB03514.2| 729|Caenorhabditis elegans Hypothetical p... 29 3.1
Z78062-2|CAB01499.2| 689|Caenorhabditis elegans Hypothetical pr... 29 3.1
DQ372920-1|ABD16184.1| 729|Caenorhabditis elegans Krev interact... 29 3.1
AC024806-3|AAP13749.1| 363|Caenorhabditis elegans Serpentine re... 29 4.1
Z81035-8|CAE17691.1| 118|Caenorhabditis elegans Hypothetical pr... 28 7.2
AC084197-18|AAM44394.1| 546|Caenorhabditis elegans Hypothetical... 28 9.5
>Z74473-2|CAA98949.2| 319|Caenorhabditis elegans Hypothetical
protein F56H9.1 protein.
Length = 319
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 402 IFRFFKFIMNNKVSFHILLTIYYYN*WVICNIYIL 298
+F FFKF+ K SF+IL T + +++ +Y L
Sbjct: 27 LFMFFKFLSYEKTSFYILCTSKTLSNFILLTVYFL 61
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 30.7 bits (66), Expect = 1.3
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Frame = +1
Query: 121 LMYDGTLLVVGFSLESFETETEKNSY-----SQLLLNFPAEIELCGVVKFGETLTTDSTT 285
L++ GT+ + +LE TEK+ Y S L +F +EI L F L++ T
Sbjct: 1208 LLFGGTVFIEEKNLEELWKSTEKDVYTCHSLSNLKYHFESEITLNSSFMF--LLSSSFQT 1265
Query: 286 KEILQDVDITDNPLI-------IIINREKDMKAHFIVHDKFEETKYEVFSPEELWKQFLH 444
LQ + + N +I I +REK ++ I+ D FE F LWK +L
Sbjct: 1266 ARSLQFGNSSYNKVIDEKLSLNSIAHREKKVQKFQIISD-FE----NYFGSRGLWKNYLE 1320
Query: 445 VRLNTVL 465
+ +L
Sbjct: 1321 AMICRIL 1327
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 30.7 bits (66), Expect = 1.3
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
Frame = +1
Query: 121 LMYDGTLLVVGFSLESFETETEKNSY-----SQLLLNFPAEIELCGVVKFGETLTTDSTT 285
L++ GT+ + +LE TEK+ Y S L +F +EI L F L++ T
Sbjct: 1208 LLFGGTVFIEEKNLEELWKSTEKDVYTCHSLSNLKYHFESEITLNSSFMF--LLSSSFQT 1265
Query: 286 KEILQDVDITDNPLI-------IIINREKDMKAHFIVHDKFEETKYEVFSPEELWKQFLH 444
LQ + + N +I I +REK ++ I+ D FE F LWK +L
Sbjct: 1266 ARSLQFGNSSYNKVIDEKLSLNSIAHREKKVQKFQIISD-FE----NYFGSRGLWKNYLE 1320
Query: 445 VRLNTVL 465
+ +L
Sbjct: 1321 AMICRIL 1327
>Z81581-16|CAI46620.1| 656|Caenorhabditis elegans Hypothetical
protein ZK265.1b protein.
Length = 656
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1
Query: 622 EATVGELVDSMSPEQPSKKKKYNINNAEILPVSLILKVTKDILSDKLXKTAVKMMTTQRK 801
EATVGE++D ++ E +++ N + S+ L++ D L D K K TT RK
Sbjct: 448 EATVGEVLDRLAEETQLNREQMNCFALFVYSESMSLQLQPDSLIDGKLKVD-KWNTTIRK 506
>Z81581-15|CAI46619.1| 729|Caenorhabditis elegans Hypothetical
protein ZK265.1a protein.
Length = 729
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1
Query: 622 EATVGELVDSMSPEQPSKKKKYNINNAEILPVSLILKVTKDILSDKLXKTAVKMMTTQRK 801
EATVGE++D ++ E +++ N + S+ L++ D L D K K TT RK
Sbjct: 448 EATVGEVLDRLAEETQLNREQMNCFALFVYSESMSLQLQPDSLIDGKLKVD-KWNTTIRK 506
>Z81143-11|CAI46592.1| 656|Caenorhabditis elegans Hypothetical
protein ZK265.1b protein.
Length = 656
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1
Query: 622 EATVGELVDSMSPEQPSKKKKYNINNAEILPVSLILKVTKDILSDKLXKTAVKMMTTQRK 801
EATVGE++D ++ E +++ N + S+ L++ D L D K K TT RK
Sbjct: 448 EATVGEVLDRLAEETQLNREQMNCFALFVYSESMSLQLQPDSLIDGKLKVD-KWNTTIRK 506
>Z81143-10|CAB03514.2| 729|Caenorhabditis elegans Hypothetical
protein ZK265.1a protein.
Length = 729
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1
Query: 622 EATVGELVDSMSPEQPSKKKKYNINNAEILPVSLILKVTKDILSDKLXKTAVKMMTTQRK 801
EATVGE++D ++ E +++ N + S+ L++ D L D K K TT RK
Sbjct: 448 EATVGEVLDRLAEETQLNREQMNCFALFVYSESMSLQLQPDSLIDGKLKVD-KWNTTIRK 506
>Z78062-2|CAB01499.2| 689|Caenorhabditis elegans Hypothetical
protein F16D3.2 protein.
Length = 689
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +1
Query: 646 DSMSPEQPSKKKKYNINNAEILPVSLILKVTKDILSDKLXKTAVKMM 786
D+ SP+ +++N ++ + P L + D+LS K+ K K+M
Sbjct: 284 DASSPDLADLARRFNSSSINVQPQPLESVASSDVLSKKIAKAVRKIM 330
>DQ372920-1|ABD16184.1| 729|Caenorhabditis elegans Krev interaction
trapped/cerebralcavernous malformation 1 isoform a
protein.
Length = 729
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +1
Query: 622 EATVGELVDSMSPEQPSKKKKYNINNAEILPVSLILKVTKDILSDKLXKTAVKMMTTQRK 801
EATVGE++D ++ E +++ N + S+ L++ D L D K K TT RK
Sbjct: 448 EATVGEVLDRLAEETQLNREQMNCFALFVYSESMSLQLQPDSLIDGKLKVD-KWNTTIRK 506
>AC024806-3|AAP13749.1| 363|Caenorhabditis elegans Serpentine
receptor, class w protein40 protein.
Length = 363
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = -2
Query: 806 AGFLXVVIIFTAVLXNLSDKISFVTFSIKLTGNISALLI---LYFFFFDGCSGLIESTSS 636
A + ++I+ + NLS + F+ +I T + ++I +YF++ S + E +S
Sbjct: 51 ANIVHLIILSQKSMRNLSVNVFFIGIAICDTIRLLLIIISFIIYFYYIFQASFIHEKCTS 110
Query: 635 PTVASVLV 612
PT S+L+
Sbjct: 111 PTSHSMLL 118
>Z81035-8|CAE17691.1| 118|Caenorhabditis elegans Hypothetical
protein C15H11.10 protein.
Length = 118
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 16 FFYLFKMSPRLKISXYVIERLSKIDTT 96
F + K+SPRLK Y ER+ ID T
Sbjct: 76 FICVGKLSPRLKDRNYAYERIDLIDAT 102
>AC084197-18|AAM44394.1| 546|Caenorhabditis elegans Hypothetical
protein Y73B6BL.4 protein.
Length = 546
Score = 27.9 bits (59), Expect = 9.5
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 193 SYSQLLLNFPAEIELCGV-VKFGETLTTDSTTKEILQDVDITDNPLIIIINREKDMKAHF 369
+Y + L +P E C V V G T+T+ T + D L II + H
Sbjct: 404 AYHEAKLLWPDENVNCVVSVGNGRTVTSVEPTPTVFS-TSFQDKLLRIIDSATDTEGVHM 462
Query: 370 IVHDKFEETKYEVFSP 417
VHD E+ Y F+P
Sbjct: 463 NVHDMLPESVYYRFNP 478
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,028,805
Number of Sequences: 27780
Number of extensions: 374525
Number of successful extensions: 1023
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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